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PDB: 76 results

8D02
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BU of 8d02 by Molmil
Crystal Structure of Bacillus anthracis BxpB
Descriptor: BxpB, CALCIUM ION
Authors:Chattopadhyay, D, Turnbough, C.L.
Deposit date:2022-05-25
Release date:2023-05-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure and induced stability of trimeric BxpB: implications for the assembly of BxpB-BclA complexes in the exosporium of Bacillus anthracis.
Mbio, 14, 2023
7UW2
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BU of 7uw2 by Molmil
Crystal structure of human Retinoid X receptor alpha ligand binding domain complex with UAB116 and coactivator peptide GRIP-1
Descriptor: (2E,4E,6Z,8E)-8-{3-[(2S)-butan-2-yl]-2-(3-methylbutyl)cyclohex-2-en-1-ylidene}-3,7-dimethylocta-2,4,6-trienoic acid, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
Authors:Chattopadhyay, D, Yang, Z, Atigadda, V.
Deposit date:2022-05-02
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Conformationally Defined Rexinoids for the Prevention of Inflammation and Nonmelanoma Skin Cancers.
J.Med.Chem., 65, 2022
7UW4
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BU of 7uw4 by Molmil
Crystal structure of human Retinoid X receptor alpha ligand binding domain complex with UAB113 and coactivator peptide GRIP-1
Descriptor: (2E,4E,6Z,8E)-3,7-dimethyl-8-[2-(3-methylbutyl)-3-propylcyclohex-2-en-1-ylidene]octa-2,4,6-trienoic acid, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
Authors:Chattopadhyay, D, Yang, Z, Atigadda, V.
Deposit date:2022-05-02
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformationally Defined Rexinoids for the Prevention of Inflammation and Nonmelanoma Skin Cancers.
J.Med.Chem., 65, 2022
3NT7
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BU of 3nt7 by Molmil
Crystal Structure of Vaccinia Virus Uracil DNA Glycosylase R187V Mutant
Descriptor: GLYCEROL, SULFATE ION, Uracil-DNA glycosylase
Authors:Chattopadhyay, D.
Deposit date:2010-07-02
Release date:2011-05-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Vaccinia virus D4 mutants defective in processive DNA synthesis retain binding to A20 and DNA.
J.Virol., 84, 2010
4ZX2
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BU of 4zx2 by Molmil
Co-crystal structures of PP5 in complex with 5-methyl-7-oxabicyclo[2.2.1]heptane-2,3-dicarboxylic acid
Descriptor: (1S,2R,3S,4R,5S)-5-methyl-7-oxabicyclo[2.2.1]heptane-2,3-dicarboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
Authors:Chattopadhyay, D, Swingle, M.R, Salter, E.A, Wierzbicki, A, Honkanen, R.E.
Deposit date:2015-05-19
Release date:2016-04-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Crystal structures and mutagenesis of PPP-family ser/thr protein phosphatases elucidate the selectivity of cantharidin and novel norcantharidin-based inhibitors of PP5C.
Biochem. Pharmacol., 109, 2016
4ZVZ
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BU of 4zvz by Molmil
Co-crystal structures of PP5 in complex with 5-methyl-7-oxabicyclo[2.2.1]heptane-2,3-dicarboxylic acid
Descriptor: (1R,2S,3R,4S,5S)-5-(propoxymethyl)-7-oxabicyclo[2.2.1]heptane-2,3-dicarboxylic acid, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ...
Authors:Chattopadhyay, D, Swingle, M.R, Salter, E.A, Wierzbicki, A, Honkanen, R.E.
Deposit date:2015-05-18
Release date:2016-04-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures and mutagenesis of PPP-family ser/thr protein phosphatases elucidate the selectivity of cantharidin and novel norcantharidin-based inhibitors of PP5C.
Biochem. Pharmacol., 109, 2016
1D5C
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BU of 1d5c by Molmil
CRYSTAL STRUCTURE OF PLASMODIUM FALCIPARUM RAB6 COMPLEXED WITH GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, RAB6 GTPASE
Authors:Chattopadhyay, D, Langsley, G, Carson, M, Recacha, R, DeLucas, L, Smith, C.
Deposit date:1999-10-06
Release date:2000-08-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the nucleotide-binding domain of Plasmodium falciparum rab6 in the GDP-bound form.
Acta Crystallogr.,Sect.D, 56, 2000
5UI1
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BU of 5ui1 by Molmil
Crystal Structure of Human Protein Phosphatase 5C (PP5C) in complex with a triazole inhibitor
Descriptor: 5-phenyl-1H-1,2,3-triazole-4-carboxylic acid, MANGANESE (II) ION, Serine/threonine-protein phosphatase 5
Authors:Chattopadhyay, D, Swingle, M.R, Salter, E.A, Banerjee, S, Honkanen, R.E.
Deposit date:2017-01-12
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal Structure Human PP5C in Complex with an Inhibitor
To Be Published
1LTK
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BU of 1ltk by Molmil
CRYSTAL STRUCTURE OF PHOSPHOGLYCERATE KINASE FROM PLASMODIUM FALCIPARUM, IN THE OPEN CONFORMATION
Descriptor: ADENOSINE MONOPHOSPHATE, GLYCEROL, PHOSPHOGLYCERATE KINASE, ...
Authors:Chattopadhyay, D, Pal, B, Smith, C.D.
Deposit date:2002-05-20
Release date:2003-07-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:CRYSTAL STRUCTURE OF PHOSPHOGLYCERATE KINASE FROM PLASMODIUM FALCIPARUM
To be Published
3CLV
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BU of 3clv by Molmil
Crystal Structure of Rab5a from plasmodium falciparum, PFB0500c
Descriptor: CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, Rab5 protein, ...
Authors:Chattopadhyay, D, Wernimont, A.K, Langsley, G, Lew, J, Kozieradzki, I, Cossar, D, Schapira, M, Bochkarev, A, Arrowsmith, C.H, Bountra, C, Weigelt, J, Edwards, A.M, Hui, R, Sukumar, D, Structural Genomics Consortium (SGC)
Deposit date:2008-03-20
Release date:2008-07-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal Structure of Rab5a from plasmodium falciparum, PFB0500c
To be Published
4ND3
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BU of 4nd3 by Molmil
Crystal structure of the lactate dehydrogenase from cryptosporidium parvum complexed with substrate (l-lactic acid) and cofactor (b-nicotinamide adenine dinucleotide)
Descriptor: (2S)-2-HYDROXYPROPANOIC ACID, GLYCEROL, Lactate dehydrogenase, ...
Authors:Chattopadhyay, D, Cook, W.J.
Deposit date:2013-10-25
Release date:2014-12-17
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Biochemical and structural characterization of Cryptosporidium parvum Lactate dehydrogenase.
Int.J.Biol.Macromol., 74C, 2014
4ND4
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BU of 4nd4 by Molmil
Crystal structure of the lactate dehydrogenase from cryptosporidium parvum complexed with substrate (pyruvic acid) and cofactor (b-nicotinamide adenine dinucleotide)
Descriptor: GLYCEROL, Lactate dehydrogenase, adjacent gene encodes predicted malate dehydrogenase, ...
Authors:Chattopadhyay, D, Cook, W.J.
Deposit date:2013-10-25
Release date:2014-12-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biochemical and structural characterization of Cryptosporidium parvum Lactate dehydrogenase.
Int.J.Biol.Macromol., 74C, 2014
4ND2
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BU of 4nd2 by Molmil
Crystal structure of the lactate dehydrogenase from cryptosporidium parvum complexed with substrate (pyruvic acid) and cofactor analog (3-acetylpyridine adenine dinucleotide)
Descriptor: 3-ACETYLPYRIDINE ADENINE DINUCLEOTIDE, GLYCEROL, Lactate dehydrogenase, ...
Authors:Chattopadhyay, D, Cook, W.J.
Deposit date:2013-10-25
Release date:2014-12-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biochemical and structural characterization of Cryptosporidium parvum Lactate dehydrogenase.
Int.J.Biol.Macromol., 74C, 2014
4ND1
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BU of 4nd1 by Molmil
Crystal structure of the lactate dehydrogenase from cryptosporidium parvum complexed with cofactor (b-nicotinamide adenine dinucleotide) and inhibitor (oxamic acid)
Descriptor: GLYCEROL, Lactate dehydrogenase, adjacent gene encodes predicted malate dehydrogenase, ...
Authors:Chattopadhyay, D, Cook, W.J.
Deposit date:2013-10-25
Release date:2014-12-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Biochemical and structural characterization of Cryptosporidium parvum Lactate dehydrogenase.
Int.J.Biol.Macromol., 74C, 2014
4ND5
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BU of 4nd5 by Molmil
Crystal structure of the lactate dehydrogenase from cryptosporidium parvum
Descriptor: Lactate dehydrogenase, adjacent gene encodes predicted malate dehydrogenase
Authors:Chattopadhyay, D, Cook, W.J.
Deposit date:2013-10-25
Release date:2014-12-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biochemical and structural characterization of Cryptosporidium parvum Lactate dehydrogenase.
Int.J.Biol.Macromol., 74C, 2014
2PMS
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BU of 2pms by Molmil
Crystal structure of the complex of human lactoferrin N-lobe and lactoferrin-binding domain of pneumococcal surface protein A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Chattopadhyay, D, Senkovich, O, Cook, W.J.
Deposit date:2007-04-23
Release date:2007-06-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Structure of a Complex of Human Lactoferrin N-lobe with Pneumococcal Surface Protein A Provides Insight into Microbial Defense Mechanism.
J.Mol.Biol., 370, 2007
2B5B
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BU of 2b5b by Molmil
A reptilian defensin with anti-bacterial and anti-viral activity
Descriptor: Defensin
Authors:Chattopadhyay, S, Sinha, N.K, Banerjee, S, Roy, D, Chattopadhyay, D, Roy, S.
Deposit date:2005-09-28
Release date:2006-06-27
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Small cationic protein from a marine turtle has beta-defensin-like fold and antibacterial and antiviral activity.
Proteins, 64, 2006
6WYC
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BU of 6wyc by Molmil
Crystal Structure of Chlamydia trachomatis Glyceraldehyde 3-phosphate dehydrogenase
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Schormann, N, Chattopadhyay, D.
Deposit date:2020-05-12
Release date:2020-11-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Chlamydia trachomatis glyceraldehyde 3-phosphate dehydrogenase: Enzyme kinetics, high-resolution crystal structure, and plasminogen binding.
Protein Sci., 29, 2020
6X2E
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BU of 6x2e by Molmil
Crystal Structure of Chlamydia trachomatis mixed (apo/holo) Glyceraldehyde 3-phosphate dehydrogenase
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Schormann, N, Chattopadhyay, D.
Deposit date:2020-05-20
Release date:2020-11-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Chlamydia trachomatis glyceraldehyde 3-phosphate dehydrogenase: Enzyme kinetics, high-resolution crystal structure, and plasminogen binding.
Protein Sci., 29, 2020
3SUB
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BU of 3sub by Molmil
Crystal structure of the catalytic domain of Plasmodium falciparum ARF GTPase activating protein
Descriptor: ADP-ribosylation factor GTPase-activating protein, SULFATE ION, ZINC ION
Authors:Cook, W.J, Chattopadhyay, D.
Deposit date:2011-07-11
Release date:2011-11-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the catalytic domain of Plasmodium falciparum ARF GTPase-activating protein (ARFGAP).
Acta Crystallogr.,Sect.F, 67, 2011
4DOF
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BU of 4dof by Molmil
Structures of Vaccinia Virus Uracil-DNA Glycosylase in New Crystal Forms
Descriptor: Uracil-DNA glycosylase
Authors:Schormann, N, Chattopadhyay, D.
Deposit date:2012-02-09
Release date:2013-02-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Analysis of the Dimer Interface in Crystal Structures of Vaccinia Virus Uracil DNA Glycosylase
To be Published
6P0Y
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BU of 6p0y by Molmil
Cryptosporidium parvum pyruvate kinase in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Schormann, N, Chattopadhyay, D.
Deposit date:2019-05-17
Release date:2019-08-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:An overview of structure, function, and regulation of pyruvate kinases.
Protein Sci., 28, 2019
3HBB
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BU of 3hbb by Molmil
Structures of dihydrofolate reductase-thymidylate synthase of Trypanosoma cruzi in the folate-free state and in complex with two antifolate drugs, trimetrexate and methotrexate
Descriptor: 1,2-ETHANEDIOL, Dihydrofolate reductase-thymidylate synthase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Schormann, N, Senkovich, O, Chattopadhyay, D.
Deposit date:2009-05-04
Release date:2009-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of dihydrofolate reductase-thymidylate synthase of Trypanosoma cruzi in the folate-free state and in complex with two antifolate drugs, trimetrexate and methotrexate.
Acta Crystallogr.,Sect.D, 65, 2009
4DRS
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BU of 4drs by Molmil
Crystal structure of Cryptosporidium parvum pyruvate kinase
Descriptor: ACETATE ION, GLYCEROL, Pyruvate kinase, ...
Authors:Cook, W.J, Chattopadhyay, D.
Deposit date:2012-02-17
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Cryptosporidium parvum pyruvate kinase.
Plos One, 7, 2012
4DOG
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BU of 4dog by Molmil
Structures of Vaccinia Virus Uracil-DNA Glycosylase in New Crystal Forms
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Uracil-DNA glycosylase
Authors:Schormann, N, Chattopadhyay, D.
Deposit date:2012-02-09
Release date:2013-02-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Analysis of the Dimer Interface in Crystal Structures of Vaccinia Virus Uracil DNA Glycosylase
To be Published

 

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