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PDB: 1065 results

4MXK
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BU of 4mxk by Molmil
X-ray structure of Fe(II)-ZnPIXFeBMb1
Descriptor: FE (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING ZN
Authors:Chakraborty, S, Lu, Y, Petrik, I.
Deposit date:2013-09-26
Release date:2014-02-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Spectroscopic and computational study of a nonheme iron nitrosyl center in a biosynthetic model of nitric oxide reductase.
Angew.Chem.Int.Ed.Engl., 53, 2014
7MJ1
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BU of 7mj1 by Molmil
LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with NAD
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Chatterjee, S, Rankin, J.A, Lagishetty, S, Hu, J, Hausinger, R.P.
Deposit date:2021-04-19
Release date:2021-09-29
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (3.402 Å)
Cite:The LarB carboxylase/hydrolase forms a transient cysteinyl-pyridine intermediate during nickel-pincer nucleotide cofactor biosynthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MJ0
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BU of 7mj0 by Molmil
LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with adenosine monophosphate AMP
Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, Pyridinium-3,5-biscarboxylic acid mononucleotide synthase
Authors:Chatterjee, S, Rankin, J.A, Lagishetty, S, Hu, J, Hausinger, R.P.
Deposit date:2021-04-19
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:The LarB carboxylase/hydrolase forms a transient cysteinyl-pyridine intermediate during nickel-pincer nucleotide cofactor biosynthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MJ2
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BU of 7mj2 by Molmil
LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with Zn
Descriptor: MAGNESIUM ION, Pyridinium-3,5-biscarboxylic acid mononucleotide synthase, ZINC ION
Authors:Chatterjee, S, Rankin, J.A, Lagishetty, S, Hu, J, Hausinger, R.P.
Deposit date:2021-04-19
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The LarB carboxylase/hydrolase forms a transient cysteinyl-pyridine intermediate during nickel-pincer nucleotide cofactor biosynthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
2KJD
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BU of 2kjd by Molmil
Solution structure of extended PDZ2 domain from NHERF1 (150-270)
Descriptor: Sodium/hydrogen exchange regulatory cofactor NHE-RF1
Authors:Bhattacharya, S, Cowburn, D, Bu, Z.
Deposit date:2009-05-27
Release date:2009-12-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A dynamic intramolecular conformational switch autoregulates the scaffolding protein NHERF1
To be Published
3G4E
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BU of 3g4e by Molmil
Crystal structure of human senescence marker protein-30(SMP30)(Calcium bound)
Descriptor: CALCIUM ION, Regucalcin
Authors:Chakraborti, S, Bahnson, B.J.
Deposit date:2009-02-03
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Crystal structure of human senescence marker protein 30: insights linking structural, enzymatic, and physiological functions .
Biochemistry, 49, 2010
3FXE
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BU of 3fxe by Molmil
Crystal structure of interacting domains of IcmR and IcmQ (seleno-derivative)
Descriptor: Protein IcmQ, Protein IcmR
Authors:Raychaudhury, S, Akey, C.W, Head, J.F.
Deposit date:2009-01-20
Release date:2009-04-28
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and Function of Interacting IcmR-IcmQ Domains from a Type IVb Secretion System in Legionella pneumophila.
Structure, 17, 2009
4YSI
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BU of 4ysi by Molmil
Structure of USP7 with a novel viral protein
Descriptor: GLYCEROL, SER-PRO-GLY-GLU-GLY-PRO-SER-GLY, Ubiquitin carboxyl-terminal hydrolase 7
Authors:Chavoshi, S, Saridakis, V.
Deposit date:2015-03-17
Release date:2016-02-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Structure of USP7 with a novel viral protein
J.Biol.Chem., 2016
4YT3
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BU of 4yt3 by Molmil
CYP106A2
Descriptor: ACETATE ION, Cytochrome P450(MEG), PROTOPORPHYRIN IX CONTAINING FE
Authors:janocha, S, carius, y, bernhardt, r, lancaster, c.r.d.
Deposit date:2015-03-17
Release date:2016-02-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of CYP106A2 in Substrate-Free and Substrate-Bound Form.
Chembiochem, 17, 2016
2KFT
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BU of 2kft by Molmil
NMR Solution structure of the first PHD finger domain of human Autoimmune Regulator (AIRE) in complex with Histone H3(1-20Cys) Peptide
Descriptor: Autoimmune regulator, Histone H3, ZINC ION
Authors:Chakravarty, S, Zeng, L, Zhou, M.
Deposit date:2009-02-27
Release date:2009-04-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and Site-Specific Recognition of Histone H3 by the PHD Finger of Human Autoimmune Regulator.
Structure, 17, 2009
6VGS
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BU of 6vgs by Molmil
Alpha-ketoisovalerate decarboxylase (KivD) from Lactococcus lactis, thermostable mutant
Descriptor: Alpha-keto acid decarboxylase, MAGNESIUM ION, THIAMINE DIPHOSPHATE
Authors:Chan, S, Korman, T.P, Sawaya, M.R, Bowie, J.U.
Deposit date:2020-01-08
Release date:2020-08-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Isobutanol production freed from biological limits using synthetic biochemistry.
Nat Commun, 11, 2020
3K6W
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BU of 3k6w by Molmil
Apo and ligand bound structures of ModA from the archaeon Methanosarcina acetivorans
Descriptor: MOLYBDATE ION, SULFATE ION, Solute-binding protein MA_0280
Authors:Chan, S, Chernishof, I, Giuroiu, I, Sawaya, M.R, Chiang, J, Gunsalus, R.P, Arbing, M.A, Perry, L.J.
Deposit date:2009-10-09
Release date:2010-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Apo and ligand-bound structures of ModA from the archaeon Methanosarcina acetivorans
Acta Crystallogr.,Sect.F, 66, 2010
3K6X
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BU of 3k6x by Molmil
M. acetivorans Molybdate-Binding Protein (ModA) in Molybdate-Bound Close Form with 2 Molecules in Asymmetric Unit Forming Beta Barrel
Descriptor: MOLYBDATE ION, SULFATE ION, Solute-binding protein MA_0280
Authors:Chan, S, Chernishof, I, Giuroiu, I, Sawaya, M.R, Chiang, J, Gunsalus, R.P, Arbing, M.A, Perry, L.J.
Deposit date:2009-10-09
Release date:2010-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Apo and ligand-bound structures of ModA from the archaeon Methanosarcina acetivorans
Acta Crystallogr.,Sect.F, 66, 2010
3K6U
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BU of 3k6u by Molmil
M. acetivorans Molybdate-Binding Protein (ModA) in Unliganded Open Form
Descriptor: Solute-binding protein MA_0280
Authors:Chan, S, Giuroiu, I, Chernishof, I, Sawaya, M.R, Chiang, J, Gunsalus, R.P, Arbing, M.A, Perry, L.J.
Deposit date:2009-10-09
Release date:2010-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Apo and ligand-bound structures of ModA from the archaeon Methanosarcina acetivorans
Acta Crystallogr.,Sect.F, 66, 2010
4UM2
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BU of 4um2 by Molmil
Crystal structure of the TPR domain of SMG6
Descriptor: GLYCEROL, TELOMERASE-BINDING PROTEIN EST1A
Authors:Chakrabarti, S, Bonneau, F, Schuessler, S, Eppinger, E, Conti, E.
Deposit date:2014-05-14
Release date:2014-07-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Phospho-Dependent and Phospho-Independent Interactions of the Helicase Upf1 with the Nmd Factors Smg5-Smg7 and Smg6.
Nucleic Acids Res., 42, 2014
3MVE
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BU of 3mve by Molmil
Crystal structure of a novel pyruvate decarboxylase
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, UPF0255 protein VV1_0328
Authors:Cha, S.S, Jeong, C.S, An, Y.J.
Deposit date:2010-05-04
Release date:2011-05-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:FrsA functions as a cofactor-independent decarboxylase to control metabolic flux.
Nat.Chem.Biol., 7, 2011
3BP3
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BU of 3bp3 by Molmil
Crystal structure of EIIB
Descriptor: Glucose-specific phosphotransferase enzyme IIB component, SULFATE ION
Authors:Cha, S.S, Jung, H.I, An, Y.J.
Deposit date:2007-12-18
Release date:2008-11-04
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Analyses of Mlc-IIBGlc interaction and a plausible molecular mechanism of Mlc inactivation by membrane sequestration.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BWE
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BU of 3bwe by Molmil
Crystal structure of aggregated form of DJ1
Descriptor: PHOSPHATE ION, Protein DJ-1
Authors:Cha, S.S.
Deposit date:2008-01-09
Release date:2008-10-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of filamentous aggregates of human DJ-1 formed in an inorganic phosphate-dependent manner.
J.Biol.Chem., 283, 2008
1ZKJ
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BU of 1zkj by Molmil
Structural Basis for the Extended Substrate Spectrum of CMY-10, a Plasmid-Encoded Class C beta-lactamase
Descriptor: ACETIC ACID, ZINC ION, extended-spectrum beta-lactamase
Authors:Cha, S.S, Jung, H.I, An, Y.J, Lee, S.H.
Deposit date:2005-05-03
Release date:2006-04-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for the extended substrate spectrum of CMY-10, a plasmid-encoded class C beta-lactamase.
Mol.Microbiol., 60, 2006
8YMC
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BU of 8ymc by Molmil
FtsEX in nanodisc
Descriptor: 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division ATP-binding protein FtsE, ...
Authors:Chang, S, Dong, H, Tang, X.
Deposit date:2024-03-08
Release date:2025-03-12
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural and molecular dynamics simulations reveal the mechanotransduction mechanism of FtsEX
To Be Published
4WBC
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BU of 4wbc by Molmil
2.13 A STRUCTURE OF A KUNITZ-TYPE WINGED BEAN CHYMOTRYPSIN INHIBITOR PROTEIN
Descriptor: PROTEIN (CHYMOTRYPSIN INHIBITOR), SULFATE ION
Authors:Ravichandran, S, Sen, U, Chakrabarti, C, Dattagupta, J.K.
Deposit date:1999-03-04
Release date:1999-03-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.138 Å)
Cite:Cryocrystallography of a Kunitz-type serine protease inhibitor: the 90 K structure of winged bean chymotrypsin inhibitor (WCI) at 2.13 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
6N2G
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BU of 6n2g by Molmil
Crystal structure of Caenorhabditis elegans NAP1
Descriptor: Nucleosome Assembly Protein
Authors:Bhattacharyya, S, DArcy, S.
Deposit date:2018-11-13
Release date:2019-01-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.003 Å)
Cite:Characterization of Caenorhabditis elegans Nucleosome Assembly Protein 1 Uncovers the Role of Acidic Tails in Histone Binding.
Biochemistry, 58, 2019
8GT0
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BU of 8gt0 by Molmil
Structure of falcipain and human Stefin A complex
Descriptor: 1,2-ETHANEDIOL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, CHLORIDE ION, ...
Authors:Chakraborty, S, Biswas, S.
Deposit date:2022-09-07
Release date:2023-09-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:Structure of falcipain and human Stefin A complex
To Be Published
8GT7
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BU of 8gt7 by Molmil
Structure of falcipain and human Stefin A mutant complex
Descriptor: 1,2-ETHANEDIOL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, Cystatin-A, ...
Authors:Chakraborty, S, Biswas, S.
Deposit date:2022-09-07
Release date:2023-09-13
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:Structure of falcipain and human Stefin A complex
To Be Published
8G38
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BU of 8g38 by Molmil
Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate
Descriptor: 16S, 23S, 30S ribosomal protein S10, ...
Authors:Bhattacharjee, S, Brown, P.Z, Frank, J.
Deposit date:2023-02-07
Release date:2023-12-06
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Time resolution in cryo-EM using a PDMS-based microfluidic chip assembly and its application to the study of HflX-mediated ribosome recycling.
Cell, 187, 2024

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