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PDB: 1059 results

1EWY
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BU of 1ewy by Molmil
ANABAENA PCC7119 FERREDOXIN:FERREDOXIN-NADP+-REDUCTASE COMPLEX
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FERREDOXIN I, FERREDOXIN-NADP REDUCTASE, ...
Authors:Morales, R, Charon, M.H, Frey, M.
Deposit date:2000-04-28
Release date:2001-02-07
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystallographic studies of the interaction between the ferredoxin-NADP+ reductase and ferredoxin from the cyanobacterium Anabaena: looking for the elusive ferredoxin molecule.
Acta Crystallogr.,Sect.D, 56, 2000
5EAL
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BU of 5eal by Molmil
Crystal structure of human WDR5 in complex with compound 9h
Descriptor: 1,2-ETHANEDIOL, 3-methyl-~{N}-[2-(4-methylpiperazin-1-yl)-5-quinolin-3-yl-phenyl]benzamide, CHLORIDE ION, ...
Authors:DONG, A, DOMBROVSKI, L, SMIL, D, GETLIK, M, BOLSHAN, Y, WALKER, J.R, SENISTERRA, G, PODA, G, AL-AWAR, R, SCHAPIRA, M, VEDADI, M, Bountra, C, Edwards, A.M, Arrowsmith, C.H, BROWN, P.J, WU, H, Structural Genomics Consortium (SGC)
Deposit date:2015-10-16
Release date:2015-11-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of human WDR5 in complex with compound 9h
to be published
8RCM
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BU of 8rcm by Molmil
Escherichia coli paused disome complex (Non-rotated disome interface class 2)
Descriptor: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
Authors:Fluegel, T, Schacherl, M.
Deposit date:2023-12-06
Release date:2024-03-06
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8RCS
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BU of 8rcs by Molmil
Escherichia coli paused disome complex (Rotated disome interface class 1)
Descriptor: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
Authors:Fluegel, T, Schacherl, M.
Deposit date:2023-12-07
Release date:2024-03-06
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (4.46 Å)
Cite:Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8R3V
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BU of 8r3v by Molmil
Escherichia coli paused disome complex (non-rotated disome interface)
Descriptor: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
Authors:Fluegel, T, Schacherl, M.
Deposit date:2023-11-10
Release date:2024-03-06
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
1EQJ
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BU of 1eqj by Molmil
CRYSTAL STRUCTURE OF PHOSPHOGLYCERATE MUTASE FROM BACILLUS STEAROTHERMOPHILUS COMPLEXED WITH 2-PHOSPHOGLYCERATE
Descriptor: 2-PHOSPHOGLYCERIC ACID, MANGANESE (II) ION, PHOSPHOGLYCERATE MUTASE
Authors:Jedrzejas, M.J, Chander, M, Setlow, P, Krishnasamy, G.
Deposit date:2000-04-05
Release date:2001-04-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mechanism of catalysis of the cofactor-independent phosphoglycerate mutase from Bacillus stearothermophilus. Crystal structure of the complex with 2-phosphoglycerate.
J.Biol.Chem., 275, 2000
6SWH
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BU of 6swh by Molmil
Crystal structure of the ternary complex between the type 1 pilus proteins FimC, FimI and FimA from E. coli
Descriptor: 1,2-ETHANEDIOL, Chaperone protein FimC, DI(HYDROXYETHYL)ETHER, ...
Authors:Giese, C, Puorger, C, Ignatov, O, Weber, M, Scharer, M.A, Capitani, G, Glockshuber, R.
Deposit date:2019-09-20
Release date:2020-10-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Comprehensive kinetic characterization of bacterial pilus rod assembly and assembly termination
To Be Published
7D6W
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BU of 7d6w by Molmil
Crystal structure of Phycocyanin from Synechococcus sp. R42DM
Descriptor: PHYCOCYANOBILIN, Phycocyanin alpha subunit, Phycocyanin beta subunit
Authors:Patel, S.N, Sonani, R.R, Chaubey, M.G, Singh, N.K, Kumar, V, Madamwar, D.
Deposit date:2020-10-02
Release date:2021-10-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of Synechococcus phycocyanin: implications of light-harvesting and antioxidant properties.
3 Biotech, 13, 2023
1EJJ
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BU of 1ejj by Molmil
CRYSTAL STRUCTURAL ANALYSIS OF PHOSPHOGLYCERATE MUTASE COCRYSTALLIZED WITH 3-PHOSPHOGLYCERATE
Descriptor: 3-PHOSPHOGLYCERIC ACID, MANGANESE (II) ION, PHOSPHOGLYCERATE MUTASE
Authors:Jedrzejas, M.J, Chander, M, Setlow, P, Krishnasamy, G.
Deposit date:2000-03-02
Release date:2001-03-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and mechanism of action of a novel phosphoglycerate mutase from Bacillus stearothermophilus.
EMBO J., 19, 2000
8RBS
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BU of 8rbs by Molmil
Emiliania huxleyi virus 201 (EhV-201) asymmetrical unit of capsid proteins predicted by AlphaFold2 fitted into the cryo-EM density of EhV-201 virion composite map.
Descriptor: Major capsid protein, Penton protein
Authors:Homola, M, Buttner, C.R, Fuzik, T, Novacek, J, Chaillet, M, Forster, F, Plevka, P.
Deposit date:2023-12-04
Release date:2023-12-20
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (18 Å)
Cite:Structure and replication cycle of a virus infecting climate-modulating alga Emiliania huxleyi.
Sci Adv, 10, 2024
8RBT
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BU of 8rbt by Molmil
Emiliania huxleyi virus 201 (EhV-201) capsid proteins predicted by AlphaFold2 fitted into a cryo-EM density map of the EhV-201 virion capsid.
Descriptor: Major capsid protein, Penton protein
Authors:Homola, M, Buttner, C.R, Fuzik, T, Novacek, J, Chaillet, M, Forster, F, Plevka, P.
Deposit date:2023-12-04
Release date:2023-12-20
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Structure and replication cycle of a virus infecting climate-modulating alga Emiliania huxleyi.
Sci Adv, 10, 2024
8PEG
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BU of 8peg by Molmil
Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ...
Authors:Fluegel, T, Schacherl, M.
Deposit date:2023-06-13
Release date:2024-03-06
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8PKL
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BU of 8pkl by Molmil
Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)
Descriptor: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
Authors:Fluegel, T, Schacherl, M.
Deposit date:2023-06-26
Release date:2024-03-06
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
7KFR
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BU of 7kfr by Molmil
Adeno-Associated Virus (AAV-DJ) - cryo-EM structure at 1.56 Angstrom Resolution
Descriptor: Capsid protein VP1, MAGNESIUM ION
Authors:Xie, Q, Yoshioka, C.K, Chapman, M.S.
Deposit date:2020-10-14
Release date:2020-12-16
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (1.56 Å)
Cite:Adeno-Associated Virus (AAV-DJ)-Cryo-EM Structure at 1.56 Angstroms Resolution.
Viruses, 12, 2020
8RHL
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BU of 8rhl by Molmil
Yeast 20S proteasome in complex with a linear biarylether epoxyketone (compound 15a)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Linear biarylether epoxyketone, ...
Authors:Goetz, M.G, Godwin, K, Price, R, Dorn, R, Merrill-Steskal, G, Hansen, H, Klemmer, W, Produturi, G, Rocha, M, Palmer, M, Molacek, L, Strater, Z, Groll, M.
Deposit date:2023-12-15
Release date:2024-05-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Macrocyclic Oxindole Peptide Epoxyketones-A Comparative Study of Macrocyclic Inhibitors of the 20S Proteasome.
Acs Med.Chem.Lett., 15, 2024
8RHK
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BU of 8rhk by Molmil
Yeast 20S proteasome in complex with a linear oxindole epoxyketone (compound 6)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Linear oxindole epoxyketone, ...
Authors:Goetz, M.G, Godwin, K, Price, R, Dorn, R, Merrill-Steskal, G, Hansen, H, Klemmer, W, Produturi, G, Rocha, M, Palmer, M, Molacek, L, Strater, Z, Groll, M.
Deposit date:2023-12-15
Release date:2024-05-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Macrocyclic Oxindole Peptide Epoxyketones-A Comparative Study of Macrocyclic Inhibitors of the 20S Proteasome.
Acs Med.Chem.Lett., 15, 2024
7EAR
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BU of 7ear by Molmil
A positively charged mutant Cry3Aa endotoxin
Descriptor: Crystaline entomocidal protoxin
Authors:Yang, Z, Lee, M.M, Chan, M.K.
Deposit date:2021-03-08
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Efficient intracellular delivery of p53 protein by engineered protein crystals restores tumor suppressing function in vivo.
Biomaterials, 271, 2021
6T1R
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BU of 6t1r by Molmil
Pseudo-atomic model of a 16-mer assembly of reduced recombinant human alphaA-crystallin (non domain swapped configuration)
Descriptor: Alpha-crystallin A chain
Authors:Peters, C, Kaiser, C.J.O, Weinkauf, S, Zacharias, M, Buchner, J.
Deposit date:2019-10-05
Release date:2019-12-11
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (9.8 Å)
Cite:The structure and oxidation of the eye lens chaperone alpha A-crystallin.
Nat.Struct.Mol.Biol., 26, 2019
5OCJ
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BU of 5ocj by Molmil
Crystal structure of Ag85C bound to cyclophostin 8beta inhibitor
Descriptor: DIMETHYL SULFOXIDE, Diacylglycerol acyltransferase/mycolyltransferase Ag85C, methoxy-[(3~{R})-3-[(2~{R})-1-methoxy-1,3-bis(oxidanylidene)butan-2-yl]pentadecyl]phosphinic acid
Authors:Viljoen, A, Richard, M, Nguyen, P.C, Spilling, C.D, Canaan, S, Cavalier, J.F, Blaise, M, Kremer, L.
Deposit date:2017-07-03
Release date:2018-01-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cyclipostins and cyclophostin analogs inhibit the antigen 85C from
J. Biol. Chem., 293, 2018
5EAM
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BU of 5eam by Molmil
Crystal structure of human WDR5 in complex with compound 9o
Descriptor: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SULFATE ION, ...
Authors:DONG, A, DOMBROVSKI, L, SMIL, D, GETLIK, M, BOLSHAN, Y, WALKER, J.R, SENISTERRA, G, PODA, G, AL-AWAR, R, SCHAPIRA, M, VEDADI, M, Bountra, C, Edwards, A.M, Arrowsmith, C.H, BROWN, P.J, WU, H, Structural Genomics Consortium (SGC)
Deposit date:2015-10-16
Release date:2015-11-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-Based Optimization of a Small Molecule Antagonist of the Interaction Between WD Repeat-Containing Protein 5 (WDR5) and Mixed-Lineage Leukemia 1 (MLL1).
J. Med. Chem., 59, 2016
7N09
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BU of 7n09 by Molmil
Structural basis for branched substrate selectivity in a ketoreductase from Ascaris suum
Descriptor: 3-hydroxyacyl-CoA dehydrogenase type-2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Dong, H, Chang, M.C.Y.
Deposit date:2021-05-25
Release date:2021-08-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Branched Substrate Selectivity in a Ketoreductase from Ascaris suum
Acs Catalysis, 11, 2021
8RHJ
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BU of 8rhj by Molmil
Yeast 20S proteasome in complex with a macrocyclic oxindole epoxyketone (compound 5)
Descriptor: CHLORIDE ION, MAGNESIUM ION, Macrocyclic oxindole epoxyketone, ...
Authors:Goetz, M.G, Godwin, K, Price, R, Dorn, R, Merrill-Steskal, G, Hansen, H, Klemmer, W, Produturi, G, Rocha, M, Palmer, M, Molacek, L, Strater, Z, Groll, M.
Deposit date:2023-12-15
Release date:2024-05-01
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Macrocyclic Oxindole Peptide Epoxyketones-A Comparative Study of Macrocyclic Inhibitors of the 20S Proteasome.
Acs Med.Chem.Lett., 15, 2024
8RCL
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BU of 8rcl by Molmil
Escherichia coli paused disome complex (Non-rotated disome interface class 1)
Descriptor: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
Authors:Fluegel, T, Schacherl, M.
Deposit date:2023-12-06
Release date:2024-03-13
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
6VD7
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BU of 6vd7 by Molmil
Cryo-EM structure of Xenopus tropicalis pannexin 1 channel
Descriptor: Pannexin
Authors:Syrjanen, J.L, Michalski, M, Furukawa, H, Kawate, T.
Deposit date:2019-12-23
Release date:2020-02-26
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:The Cryo-EM structure of pannexin 1 reveals unique motifs for ion selection and inhibition.
Elife, 9, 2020
5OYP
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BU of 5oyp by Molmil
Sacbrood virus of honeybee
Descriptor: minor capsid protein MiCP, structural protein VP1, structural protein VP2, ...
Authors:Plevka, P, Prochazkova, M.
Deposit date:2017-09-11
Release date:2018-07-18
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Virion structure and genome delivery mechanism of sacbrood honeybee virus.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

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數據於2024-11-06公開中

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