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PDB: 318 results

3DBO
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BU of 3dbo by Molmil
Crystal structure of a member of the VapBC family of toxin-antitoxin systems, VapBC-5, from Mycobacterium tuberculosis
Descriptor: ACETATE ION, BETA-MERCAPTOETHANOL, SODIUM ION, ...
Authors:Miallau, L, Cascio, D, Eisenberg, D, Integrated Center for Structure and Function Innovation (ISFI), TB Structural Genomics Consortium (TBSGC)
Deposit date:2008-06-02
Release date:2008-07-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structure and Proposed Activity of a Member of the VapBC Family of Toxin-Antitoxin Systems: VapBC-5 FROM MYCOBACTERIUM TUBERCULOSIS.
J.Biol.Chem., 284, 2009
3EUD
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BU of 3eud by Molmil
Structure of the CS domain of the essential H/ACA RNP assembly protein Shq1p
Descriptor: Protein SHQ1
Authors:Singh, M, Cascio, D, Gonzales, F.A, Heckmann, N, Chanfreau, G, Feigon, J.
Deposit date:2008-10-09
Release date:2008-11-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and Functional Studies of the CS Domain of the Essential H/ACA Ribonucleoparticle Assembly Protein SHQ1.
J.Biol.Chem., 284, 2009
3G3X
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BU of 3g3x by Molmil
Crystal structure of spin labeled T4 Lysozyme (T151R1) at 100 K
Descriptor: 2-HYDROXYETHYL DISULFIDE, AZIDE ION, CHLORIDE ION, ...
Authors:Fleissner, M.R, Cascio, D, Hubbell, W.L.
Deposit date:2009-02-02
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural origin of weakly ordered nitroxide motion in spin-labeled proteins.
Protein Sci., 18, 2009
3G3V
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BU of 3g3v by Molmil
Crystal structure of spin labeled T4 Lysozyme (V131R1) at 291 K
Descriptor: 2-HYDROXYETHYL DISULFIDE, AZIDE ION, CHLORIDE ION, ...
Authors:Fleissner, M.R, Cascio, D, Hubbell, W.L.
Deposit date:2009-02-02
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural origin of weakly ordered nitroxide motion in spin-labeled proteins.
Protein Sci., 18, 2009
3G3W
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BU of 3g3w by Molmil
Crystal structure of spin labeled T4 Lysozyme (T151R1) at 291 K
Descriptor: 2-HYDROXYETHYL DISULFIDE, AZIDE ION, CHLORIDE ION, ...
Authors:Fleissner, M.R, Cascio, D, Hubbell, W.L.
Deposit date:2009-02-02
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural origin of weakly ordered nitroxide motion in spin-labeled proteins.
Protein Sci., 18, 2009
3IV5
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BU of 3iv5 by Molmil
Crystal structure of Fis bound to 27 bp optimal binding sequence F1
Descriptor: DNA (27-MER), DNA-binding protein fis
Authors:Stella, S, Cascio, D, Johnson, R.C.
Deposit date:2009-08-31
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
3JR9
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BU of 3jr9 by Molmil
Crystal structure of Fis bound to 27 bp optimal binding sequence F2
Descriptor: DNA (27-MER), DNA-binding protein fis
Authors:Stella, S, Cascio, D, Johnson, R.C.
Deposit date:2009-09-08
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
3JRF
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BU of 3jrf by Molmil
Crystal structure of Fis bound to 27 bp DNA F27 containing a C/G at center
Descriptor: DNA (27-MER), DNA-binding protein fis
Authors:Stella, S, Cascio, D, Johnson, R.C.
Deposit date:2009-09-08
Release date:2010-04-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
3JRD
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BU of 3jrd by Molmil
Crystal structure of Fis bound to 27 bp DNA F25 containing T2A3 sequence at center
Descriptor: DNA (27-MER), DNA-binding protein fis
Authors:Stella, S, Cascio, D, Johnson, R.C.
Deposit date:2009-09-08
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
3JRB
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BU of 3jrb by Molmil
Crystal structure of Fis bound to 27 bp DNA F24 containing T-tract at center
Descriptor: DNA (27-MER), DNA-binding protein fis
Authors:Stella, S, Cascio, D, Johnson, R.C.
Deposit date:2009-09-08
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
3JRH
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BU of 3jrh by Molmil
Crystal structure of Fis bound to 27 bp non consensus sequence DNA F21
Descriptor: DNA (27-MER), DNA-binding protein fis
Authors:Stella, S, Cascio, D, Johnson, R.C.
Deposit date:2009-09-08
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
3JRA
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BU of 3jra by Molmil
Crystal structure of Fis bound to 27bp non consensus sequence DNA F6
Descriptor: DNA (27-MER), DNA-binding protein fis
Authors:Stella, S, Cascio, D, Johnson, R.C.
Deposit date:2009-09-08
Release date:2010-04-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
3JRC
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BU of 3jrc by Molmil
Crystal structure of Fis bound to 27 bp DNA F29 containing 5 G/Cs at center
Descriptor: DNA (27-MER), DNA-binding protein fis
Authors:Stella, S, Cascio, D, Johnson, R.C.
Deposit date:2009-09-08
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
3JRI
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BU of 3jri by Molmil
Crystal structure of Fis bound to 27 bp non consensus sequence DNA F23
Descriptor: DNA (27-MER), DNA-binding protein fis
Authors:Stella, S, Cascio, D, Johnson, R.C.
Deposit date:2009-09-08
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
3JRG
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BU of 3jrg by Molmil
Crystal structure of Fis bound to 27 bp non consensus sequence DNA F18
Descriptor: DNA (27-MER), DNA-binding protein fis
Authors:Stella, S, Cascio, D, Johnson, R.C.
Deposit date:2009-09-08
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
3JRE
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BU of 3jre by Molmil
Crystal structure of Fis bound to 27 bp DNA F26 containing A-tract at center
Descriptor: DNA (27-MER), DNA-binding protein fis
Authors:Stella, S, Cascio, D, Johnson, R.C.
Deposit date:2009-09-08
Release date:2010-04-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.
Genes Dev., 24, 2010
5HA7
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BU of 5ha7 by Molmil
Human Aldose Reductase in Complex with NADP+ and WY14643 in Space Group P212121
Descriptor: 2-({4-CHLORO-6-[(2,3-DIMETHYLPHENYL)AMINO]PYRIMIDIN-2-YL}SULFANYL)ACETIC ACID, Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Sawaya, M.R, Cascio, D, Balendiran, G.K.
Deposit date:2015-12-30
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Characterization of WY 14,643 and its Complex with Aldose Reductase.
Sci Rep, 6, 2016
4M5S
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BU of 4m5s by Molmil
Human alphaB crystallin core domain in complex with C-terminal peptide
Descriptor: Alpha-crystallin B chain, SUCCINIC ACID
Authors:Laganowsky, A, Cascio, D, Sawaya, M.R, Eisenberg, D.
Deposit date:2013-08-08
Release date:2014-04-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:The structured core domain of alpha B-crystallin can prevent amyloid fibrillation and associated toxicity.
Proc.Natl.Acad.Sci.USA, 111, 2014
4M5T
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BU of 4m5t by Molmil
Disulfide trapped human alphaB crystallin core domain in complex with C-terminal peptide
Descriptor: Alpha-crystallin B chain, SULFATE ION
Authors:Laganowsky, A, Cascio, D, Hochberg, G, Sawaya, M.R, Benesch, J.L.P, Robinson, C.V, Eisenberg, D.
Deposit date:2013-08-08
Release date:2014-04-09
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structured core domain of alpha B-crystallin can prevent amyloid fibrillation and associated toxicity.
Proc.Natl.Acad.Sci.USA, 111, 2014
4MJH
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BU of 4mjh by Molmil
Human Hsp27 core domain in complex with C-terminal peptide
Descriptor: Heat shock protein beta-1
Authors:Laganowsky, A, Cascio, D, Sawaya, M.R, Eisenberg, D.
Deposit date:2013-09-03
Release date:2014-04-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:The structured core domain of alpha B-crystallin can prevent amyloid fibrillation and associated toxicity.
Proc.Natl.Acad.Sci.USA, 111, 2014
6TZN
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BU of 6tzn by Molmil
Structure of S. pombe telomerase accessory protein Pof8 C-terminal domain
Descriptor: NITRATE ION, Protein pof8
Authors:Basu, R.S, Cascio, D, Eichhorn, C.D, Feigon, J.
Deposit date:2019-08-12
Release date:2020-08-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of S. pombe telomerase protein Pof8 C-terminal domain is an xRRM conserved among LARP7 proteins.
Rna Biol., 18, 2021
4LOW
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BU of 4low by Molmil
Structure and identification of a pterin dehydratase-like protein as a RuBisCO assembly factor in the alpha-carboxysome
Descriptor: FORMIC ACID, NICKEL (II) ION, acRAF
Authors:Wheatley, N.M, Gidaniyan, S.D, Cascio, D, Yeates, T.O.
Deposit date:2013-07-13
Release date:2013-09-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure and Identification of a Pterin Dehydratase-like Protein as a Ribulose-bisphosphate Carboxylase/Oxygenase (RuBisCO) Assembly Factor in the alpha-Carboxysome.
J.Biol.Chem., 289, 2014
4MWG
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BU of 4mwg by Molmil
Crystal structure of Burkholderia xenovorans DmrB apo form: A Cubic Protein Cage for Redox Transfer
Descriptor: Putative dihydromethanopterin reductase (AfpA), SULFATE ION
Authors:Bobik, T.A, Cascio, D, Jorda, J, McNamara, D.E, Bustos, C, Wang, T.C, Rasche, M.E, Yeates, T.O.
Deposit date:2013-09-24
Release date:2014-02-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of dihydromethanopterin reductase, a cubic protein cage for redox transfer
J.Biol.Chem., 289, 2014
3K2R
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BU of 3k2r by Molmil
Crystal Structure of Spin Labeled T4 Lysozyme Mutant K65V1/R76V1
Descriptor: CHLORIDE ION, HEXANE-1,6-DIOL, Lysozyme, ...
Authors:Toledo Warshaviak, D, Cascio, D, Khramtsov, V.V, Hubbell, W.L.
Deposit date:2009-09-30
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Spin Labeled T4 Lysozyme Mutant K65V1/R76V1
To be Published
4QX0
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BU of 4qx0 by Molmil
Cry3A Toxin structure obtained by Serial Femtosecond Crystallography from in vivo grown crystals isolated from Bacillus thuringiensis and data processed with the cctbx.xfel software suite
Descriptor: Pesticidal crystal protein cry3Aa
Authors:Sawaya, M.R, Cascio, D, Gingery, M, Rodriguez, J, Goldschmidt, L, Colletier, J.-P, Messerschmidt, M, Boutet, S, Koglin, J.E, Williams, G.J, Brewster, A.S, Nass, K, Hattne, J, Botha, S, Doak, R.B, Shoeman, R.L, DePonte, D.P, Park, H.-W, Federici, B.A, Sauter, N.K, Schlichting, I, Eisenberg, D.
Deposit date:2014-07-17
Release date:2014-08-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Protein crystal structure obtained at 2.9 angstrom resolution from injecting bacterial cells into an X-ray free-electron laser beam.
Proc.Natl.Acad.Sci.USA, 111, 2014

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