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PDB: 24 results

8V3B
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BU of 8v3b by Molmil
Computational Designed Nanocage O43_129_+4
Descriptor: O43_129_+4 component A, O43_129_+4 component B
Authors:Carr, K.D, Weidle, C, Borst, A.J.
Deposit date:2023-11-27
Release date:2024-03-13
Last modified:2024-04-10
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Blueprinting extendable nanomaterials with standardized protein blocks.
Nature, 627, 2024
8AEL
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BU of 8ael by Molmil
SYNJ2BP complex with a synthetic Vangl2 peptide (3mer).
Descriptor: CALCIUM ION, GLY-GLY-GLY-THR-SER-VAL, GLYCEROL, ...
Authors:Carrasco, K, Cousido Siah, A, Gogl, G, Betzi, S, McEwen, A, Kostmann, C, Trave, G.
Deposit date:2022-07-13
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:SYNJ2BP PDZ domain in complex with a synthetic Vangl2 peptide.
To Be Published
7R2M
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BU of 7r2m by Molmil
SYNJ2BP complex with a synthetic Vangl2 peptide (9mer).
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CALCIUM ION, GLYCEROL, ...
Authors:Carrasco, K, Cousido Siah, A, Gogl, G, Betzi, S, McEwen, A, Kostmann, C, Trave, G.
Deposit date:2022-02-04
Release date:2023-05-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:SYNJ2BP PDZ domain in complex with a synthetic Vangl2 peptide.
To Be Published
8B98
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BU of 8b98 by Molmil
Crystal structure of the human BRD4-BD1 bromodomain in complex with the inhibitor CRCM5483
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, DIMETHYL SULFOXIDE, ...
Authors:Carrasco, K, Betzi, S, Morelli, X.
Deposit date:2022-10-05
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.495 Å)
Cite:Crystal structure of the human BRD4-BD1 bromodomain in complex with the inhibitor CRCM5464
To Be Published
8B96
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BU of 8b96 by Molmil
Crystal structure of the human BRD4-BD1 bromodomain in complex with the inhibitor CRCM5464
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, DIMETHYL SULFOXIDE, ...
Authors:Carrasco, K, Betzi, S, Morelli, X.
Deposit date:2022-10-05
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.338 Å)
Cite:Crystal structure of the human BRD4-BD1 bromodomain in complex with the inhibitor CRCM5464
To Be Published
7Q3F
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BU of 7q3f by Molmil
Bromodomain-containing 4 BD1 in complex with the inhibitor CRCM5484
Descriptor: 2-[[11-ethanoyl-4-(furan-2-ylmethyl)-3-oxidanylidene-8-thia-4,6,11-triazatricyclo[7.4.0.0^{2,7}]trideca-1(9),2(7),5-trien-5-yl]sulfanyl]-~{N}-(2-methylpyridin-3-yl)ethanamide, Bromodomain-containing protein 4
Authors:Carrasco, K, Betzi, S, Morelli, X.
Deposit date:2021-10-27
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:CRCM5484: A BET-BDII Selective Compound with Differential Anti-leukemic Drug Modulation
J.Med.Chem., 65, 2022
7Q5O
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BU of 7q5o by Molmil
Bromodomain-containing 2 BD2 in complex with the inhibitor CRCM5484
Descriptor: 1,2-ETHANEDIOL, 2-[[11-ethanoyl-4-(furan-2-ylmethyl)-3-oxidanylidene-8-thia-4,6,11-triazatricyclo[7.4.0.0^{2,7}]trideca-1(9),2(7),5-trien-5-yl]sulfanyl]-~{N}-(2-methylpyridin-3-yl)ethanamide, Bromodomain-containing protein 2
Authors:Carrasco, K, Betzi, S, Morelli, X.
Deposit date:2021-11-04
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.519 Å)
Cite:CRCM5484: A BET-BDII Selective Compound with Differential Anti-leukemic Drug Modulation
J.Med.Chem., 65, 2022
7R2T
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BU of 7r2t by Molmil
SYNJ2BP complex with a phosphorylated Vangl2 peptide at the P-1 position.
Descriptor: CALCIUM ION, GLYCEROL, Synaptojanin-2-binding protein,Annexin, ...
Authors:Carrasco, K, Cousido Siah, A, Gogl, G, Betzi, S, McEwen, A, Kostmann, C, Trave, G.
Deposit date:2022-02-05
Release date:2023-05-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:SYNJ2BP PDZ domain in complex with a synthetic Vangl2 peptide.
To Be Published
2QVF
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BU of 2qvf by Molmil
mouse E-cadherin domains 1,2
Descriptor: CALCIUM ION, Epithelial-cadherin (E-cadherin) (Uvomorulin) (Cadherin-1) (ARC-1) (CD324 antigen)
Authors:Carroll, K.J.
Deposit date:2007-08-08
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:E-cadherin domains 1,2
To be Published
5M53
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BU of 5m53 by Molmil
Nek2 bound to arylaminopurine inhibitor 11
Descriptor: 1,2-ETHANEDIOL, 3-[[6-(cyclohexylmethoxy)-7~{H}-purin-2-yl]amino]-~{N},~{N}-dimethyl-benzamide, DI(HYDROXYETHYL)ETHER, ...
Authors:Bayliss, R, Carr, K.H.
Deposit date:2016-10-20
Release date:2016-11-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-guided design of purine-based probes for selective Nek2 inhibition.
Oncotarget, 8, 2017
7BO7
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BU of 7bo7 by Molmil
CRYSTAL STRUCTURE OF THE HUMAN PRMT5:MEP50 COMPLEX with JNJB44355437
Descriptor: (2~{R},3~{R},4~{S},5~{R})-2-[(4~{a}~{S},7~{a}~{S})-4-azanyl-1,4,4~{a},7~{a}-tetrahydropyrrolo[2,3-d]pyrimidin-7-yl]-5-(quinolin-7-yloxymethyl)oxolane-3,4-diol, 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Brown, D, Robinson, C, Carr, K.H, Pande, V.
Deposit date:2021-01-24
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:CRYSTAL STRUCTURE OF THE HUMAN PRMT5:MEP50 COMPLEX with JNJB44355437
To Be Published
3REZ
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BU of 3rez by Molmil
glycoprotein GPIb variant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, Platelet glycoprotein Ib beta chain, ...
Authors:McEwan, P.A, Yang, W, Carr, K.H, Mo, X, Zheng, X, Li, R, Emsley, J.
Deposit date:2011-04-05
Release date:2012-02-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Quaternary organization of GPIb-IX complex and insights into Bernard-Soulier syndrome revealed by the structures of GPIb beta and a GPIb beta/GPIX chimera
Blood, 118, 2011
3RFE
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BU of 3rfe by Molmil
Crystal structure of glycoprotein GPIb ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, Platelet glycoprotein Ib beta chain, ...
Authors:McEwan, P.A, Yang, W, Carr, K.H, Mo, X, Zheng, X, Li, R, Emsley, J.
Deposit date:2011-04-06
Release date:2011-12-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.245 Å)
Cite:Quaternary organization of GPIb-IX complex and insights into Bernard-Soulier syndrome revealed by the structures of GPIbbeta and a GPIbbeta/GPIX chimer
Blood, 118, 2011
8B9V
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BU of 8b9v by Molmil
Crystal structure of Lu AF82422 in complex with alpha-synuclein 110-120
Descriptor: Alpha-synuclein 110-120, Lu AF82422 Fab heavy chain, Lu AF82422 Fab light chain, ...
Authors:Bjerregaard-Andersen, K, Carr, K, Krogh, B.O, Kallunki, P, Tagmose, L, David, L.
Deposit date:2022-10-10
Release date:2023-10-25
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of Lu AF82422 in complex with alpha-synuclein 110-120
To Be Published
1S1G
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BU of 1s1g by Molmil
Crystal Structure of Kv4.3 T1 Domain
Descriptor: Potassium voltage-gated channel subfamily D member 3, ZINC ION
Authors:Scannevin, R.H, Wang, K.W, Jow, F, Megules, J, Kopsco, D.C, Edris, W, Carroll, K.C, Lu, Q, Xu, W.X, Xu, Z.B, Katz, A.H, Olland, S, Lin, L, Taylor, M, Stahl, M, Malakian, K, Somers, W, Mosyak, L, Bowlby, M.R, Chanda, P, Rhodes, K.J.
Deposit date:2004-01-06
Release date:2004-03-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Two N-terminal domains of Kv4 K(+) channels regulate binding to and modulation by KChIP1.
Neuron, 41, 2004
1S1E
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BU of 1s1e by Molmil
Crystal Structure of Kv Channel-interacting protein 1 (KChIP-1)
Descriptor: CALCIUM ION, Kv channel interacting protein 1
Authors:Scannevin, R.H, Wang, K.-W, Jow, F, Megules, J, Kopsco, D.C, Edris, W, Carroll, K.C, Lu, Q, Xu, W.-X, Xu, Z.-B, Katz, A.H, Olland, S, Lin, L, Taylor, M, Stahl, M, Malakian, K, Somers, W, Mosyak, L, Bowlby, M.R, Chanda, P, Rhodes, K.J.
Deposit date:2004-01-06
Release date:2005-01-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Two N-terminal domains of Kv4 K(+) channels regulate binding to and modulation by KChIP1.
Neuron, 41, 2004
1S31
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BU of 1s31 by Molmil
Crystal Structure Analysis of the human Tub protein (isoform a) spanning residues 289 through 561
Descriptor: TRIETHYLENE GLYCOL, tubby isoform a
Authors:Boutboul, S, Carroll, K.J, Basdevant, A, Gomez, C, Nandrot, E, Clement, K, Shapiro, L, Abitbol, M.
Deposit date:2004-01-12
Release date:2005-01-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.704 Å)
Cite:A novel human obesity and sensory deficit syndrome resulting from a mutation in the TUB gene
To be Published
2GOY
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BU of 2goy by Molmil
Crystal structure of assimilatory adenosine 5'-phosphosulfate reductase with bound APS
Descriptor: ADENOSINE-5'-PHOSPHOSULFATE, IRON/SULFUR CLUSTER, adenosine phosphosulfate reductase
Authors:Chartron, J, Carroll, K.S, Shiau, C, Gao, H, Leary, J.A, Bertozzi, C.R, Stout, C.D.
Deposit date:2006-04-14
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Substrate Recognition, Protein Dynamics, and Iron-Sulfur Cluster in Pseudomonas aeruginosa Adenosine 5'-Phosphosulfate Reductase.
J.Mol.Biol., 364, 2006
3ZJE
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BU of 3zje by Molmil
A20 OTU domain in reversibly oxidised (SOH) state
Descriptor: 1,2-ETHANEDIOL, A20P50, CHLORIDE ION
Authors:Kulathu, Y, Garcia, F.J, Mevissen, T.E.T, Busch, M, Arnaudo, N, Carroll, K.S, Barford, D, Komander, D.
Deposit date:2013-01-17
Release date:2013-03-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Regulation of A20 and Other Otu Deubiquitinases by Reversible Oxidation
Nat.Commun., 4, 2013
2O8V
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BU of 2o8v by Molmil
PAPS reductase in a covalent complex with thioredoxin C35A
Descriptor: Phosphoadenosine phosphosulfate reductase, Thioredoxin 1
Authors:Chartron, J, Shiau, C, Stout, C.D, Carroll, K.S.
Deposit date:2006-12-12
Release date:2007-03-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:3'-Phosphoadenosine-5'-phosphosulfate Reductase in Complex with Thioredoxin: A Structural Snapshot in the Catalytic Cycle.
Biochemistry, 46, 2007
2QVI
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BU of 2qvi by Molmil
Crystal structure of N-cadherin domains EC12
Descriptor: CALCIUM ION, Cadherin-2
Authors:Shapiro, L.S, Carroll, K.J.
Deposit date:2007-08-08
Release date:2008-08-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.012 Å)
Cite:Biophysical characterization of N-cadherin and E-cadherin homophilic and heterophilic interactions
To be Published
3ZJD
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BU of 3zjd by Molmil
A20 OTU domain in reduced, active state at 1.87 A resolution
Descriptor: 1,2-ETHANEDIOL, A20P50, CHLORIDE ION
Authors:Kulathu, Y, Garcia, F.J, Mevissen, T.E.T, Busch, M, Arnaudo, N, Carroll, K.S, Barford, D, Komander, D.
Deposit date:2013-01-17
Release date:2013-03-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Regulation of A20 and Other Otu Deubiquitinases by Reversible Oxidation
Nat.Commun., 4, 2013
3ZJF
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BU of 3zjf by Molmil
A20 OTU domain with irreversibly oxidised Cys103 from 270 min H2O2 soak.
Descriptor: A20P50, CHLORIDE ION
Authors:Kulathu, Y, Garcia, F.J, Mevissen, T.E.T, Busch, M, Arnaudo, N, Carroll, K.S, Barford, D, Komander, D.
Deposit date:2013-01-17
Release date:2013-03-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Regulation of A20 and Other Otu Deubiquitinases by Reversible Oxidation
Nat.Commun., 4, 2013
3ZJG
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BU of 3zjg by Molmil
A20 OTU domain with irreversibly oxidised Cys103 from 60 min H2O2 soak.
Descriptor: CHLORIDE ION, TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3
Authors:Kulathu, Y, Garcia, F.J, Mevissen, T.E.T, Busch, M, Arnaudo, N, Carroll, K.S, Barford, D, Komander, D.
Deposit date:2013-01-17
Release date:2013-03-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Regulation of A20 and Other Otu Deubiquitinases by Reversible Oxidation
Nat.Commun., 4, 2013

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PDB entries from 2024-07-17

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