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PDB: 1278 件

6BZ8
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Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Hoffer, E.D, Maehigashi, T, Fagan, C.E, Dunham, C.M.
登録日2017-12-22
公開日2018-11-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.74 Å)
主引用文献Ribosomal ambiguity (ram) mutations promote the open (off) to closed (on) transition and thereby increase miscoding.
Nucleic Acids Res., 47, 2019
7BNT
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Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikD with a predicted ancestral HMA domain of Pik-1 from Oryza spp.
分子名称: 1,2-ETHANEDIOL, AVR-Pik protein, Predicted ancestral HMA domain of Pik-1 from Oryza spp.
著者Bialas, A, Langner, T, Harant, A, Contreras, M.P, Stevenson, C.E.M, Lawson, D.M, Sklenar, J, Kellner, R, Moscou, M.J, Terauchi, R, Banfield, M.J, Kamoun, S.
登録日2021-01-22
公開日2021-02-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Two NLR immune receptors acquired high-affinity binding to a fungal effector through convergent evolution of their integrated domain.
Elife, 10, 2021
6BNZ
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Crystal structure of E144Q-glyoxalase I mutant from Zea mays in space group P4(1)2(1)2
分子名称: COBALT (II) ION, FORMIC ACID, GLUTATHIONE, ...
著者Alvarez, C.E, Agostini, R.B, Gonzalez, J.M, Drincovich, M.F, Campos Bermudez, V.A, Klinke, S.
登録日2017-11-17
公開日2018-11-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Deciphering the number and location of active sites in the monomeric glyoxalase I of Zea mays.
Febs J., 286, 2019
6C42
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Estrogen Receptor Alpha Ligand Binding Domain in Complex with OP1156
分子名称: (2R,3S,4R)-3-(4-hydroxyphenyl)-4-methyl-2-{4-[2-(pyrrolidin-1-yl)ethoxy]phenyl}-3,4-dihydro-2H-1-benzopyran-7-ol, Estrogen receptor
著者Fanning, S.W, Hodges-Gallager, L, Myles, D.C, Sun, R, Fowler, C.E, Green, B.D, Harmon, C.L, Greene, G.L, Kushner, P.J.
登録日2018-01-11
公開日2018-02-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.997 Å)
主引用文献Specific stereochemistry of OP-1074 disrupts estrogen receptor alpha helix 12 and confers pure antiestrogenic activity.
Nat Commun, 9, 2018
6B72
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A novel HIV-1 Nef dimer interface induced by a single octyl-glucoside molecule
分子名称: Protein Nef, octyl beta-D-glucopyranoside
著者Wu, M, Augelli-Szafran, C.E, Ptak, R.G, Smithgall, T.E.
登録日2017-10-03
公開日2018-02-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献A single beta-octyl glucoside molecule induces HIV-1 Nef dimer formation in the absence of partner protein binding.
PLoS ONE, 13, 2018
6BZ6
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Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Hoffer, E.D, Maehigashi, T, Fagan, C.E, Dunham, C.M.
登録日2017-12-22
公開日2018-11-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Ribosomal ambiguity (ram) mutations promote the open (off) to closed (on) transition and thereby increase miscoding.
Nucleic Acids Res., 47, 2019
6BUW
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BU of 6buw by Molmil
Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Hoffer, E.D, Maehigashi, T, Fagan, C.E, Dunham, C.M.
登録日2017-12-11
公開日2018-11-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Ribosomal ambiguity (ram) mutations promote the open (off) to closed (on) transition and thereby increase miscoding.
Nucleic Acids Res., 47, 2019
6BZ7
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BU of 6bz7 by Molmil
Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Hoffer, E.D, Maehigashi, T, Fagan, C.E, Dunham, C.M.
登録日2017-12-22
公開日2018-11-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.68 Å)
主引用文献Ribosomal ambiguity (ram) mutations promote the open (off) to closed (on) transition and thereby increase miscoding.
Nucleic Acids Res., 47, 2019
6BNN
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BU of 6bnn by Molmil
Crystal structure of V278E-glyoxalase I mutant from Zea mays in space group P4(1)2(1)2
分子名称: COBALT (II) ION, FORMIC ACID, GLUTATHIONE, ...
著者Alvarez, C.E, Agostini, R.B, Gonzalez, J.M, Drincovich, M.F, Campos Bermudez, V.A, Klinke, S.
登録日2017-11-17
公開日2018-11-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Deciphering the number and location of active sites in the monomeric glyoxalase I of Zea mays.
Febs J., 286, 2019
4V8J
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BU of 4v8j by Molmil
Crystal structure of the bacterial ribosome ram mutation G347U.
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Fagan, C.E, Dunkle, J.A, Maehigashi, T, Dunham, C.M.
登録日2011-12-20
公開日2014-07-09
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Reorganization of an intersubunit bridge induced by disparate 16S ribosomal ambiguity mutations mimics an EF-Tu-bound state.
Proc.Natl.Acad.Sci.USA, 110, 2013
4W5Z
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BU of 4w5z by Molmil
High resolution crystal structure of catalytic domain of Chitinase 60 from psychrophilic bacteria Moritella marina.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Malecki, P.H, Vorgias, C.E, Rypniewski, W.
登録日2014-08-19
公開日2015-08-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献High resolution crystal structure of catalytic domain of Chitinase 60 from psychrophilic bacteria Moritella marina.
To Be Published
4UYI
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BU of 4uyi by Molmil
Crystal structure of the BTB domain of human SLX4 (BTBD12)
分子名称: STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX4
著者Pinkas, D.M, Sanvitale, C.E, Strain-Damerell, C, Fairhead, M, Wang, D, Tallant, C, Cooper, C.D.O, Sorrell, F.J, Kopec, J, Chaikuad, A, Fitzpatrick, F, Pike, A.C.W, Hozjan, V, Ying, Z, Roos, A.K, Savitsky, P, Bradley, A, Nowak, R, Filippakopoulos, P, Krojer, T, Burgess-Brown, N.A, Marsden, B.D, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.
登録日2014-09-01
公開日2014-10-01
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Crystal Structure of the Btb Domain of Human Slx4 (Btbd12)
To be Published
4WUB
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BU of 4wub by Molmil
N-terminal 43 kDa fragment of the E. coli DNA gyrase B subunit grown from 100 mM KCl condition
分子名称: CHLORIDE ION, DNA gyrase subunit B, MAGNESIUM ION, ...
著者Hearnshaw, S.J, Chung, T.T, Stevenson, C.E.M, Maxwell, A, Lawson, D.M.
登録日2014-10-31
公開日2015-04-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The role of monovalent cations in the ATPase reaction of DNA gyrase
Acta Crystallogr.,Sect.D, 71, 2015
4WUZ
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BU of 4wuz by Molmil
Crystal structure of lambda exonuclease in complex with DNA and Ca2+
分子名称: CALCIUM ION, DNA (5'-D(*TP*T*TP*CP*GP*GP*TP*AP*CP*AP*GP*TP*AP*G)-3'), DNA (5'-D(P*AP*GP*CP*TP*AP*CP*TP*GP*TP*AP*CP*CP*GP*A)-3'), ...
著者Zhang, J, Bell, C.E.
登録日2014-11-04
公開日2014-11-19
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Crystal Structure of lambda Exonuclease in Complex with DNA and Ca(2+).
Biochemistry, 53, 2014
4WUC
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BU of 4wuc by Molmil
N-terminal 43 kDa fragment of the E. coli DNA gyrase B subunit grown from 100 mM NaCl condition
分子名称: CHLORIDE ION, DNA gyrase subunit B, MAGNESIUM ION, ...
著者Hearnshaw, S.J, Chung, T.T, Stevenson, C.E.M, Maxwell, A, Lawson, D.M.
登録日2014-10-31
公開日2015-04-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The role of monovalent cations in the ATPase reaction of DNA gyrase
Acta Crystallogr.,Sect.D, 71, 2015
4X8A
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BU of 4x8a by Molmil
NavMS pore and C-terminal domain grown from protein purified in LiCl
分子名称: HEGA-10, Ion transport protein, NONAETHYLENE GLYCOL, ...
著者Naylor, C.E, Bagneris, C, Wallace, B.A.
登録日2014-12-10
公開日2016-03-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.02 Å)
主引用文献Molecular basis of ion permeability in a voltage-gated sodium channel.
Embo J., 35, 2016
4WUD
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BU of 4wud by Molmil
N-terminal 43 kDa fragment of the E. coli DNA gyrase B subunit grown from no salt condition
分子名称: CHLORIDE ION, DNA gyrase subunit B, MAGNESIUM ION, ...
著者Hearnshaw, S.J, Chung, T.T, Stevenson, C.E.M, Maxwell, A, Lawson, D.M.
登録日2014-10-31
公開日2015-04-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The role of monovalent cations in the ATPase reaction of DNA gyrase
Acta Crystallogr.,Sect.D, 71, 2015
4X88
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E178D Selectivity filter mutant of NavMS voltage-gated pore
分子名称: HEGA-10, Ion transport protein, PENTAETHYLENE GLYCOL, ...
著者Naylor, C.E, Bagneris, C, Wallace, B.A.
登録日2014-12-10
公開日2016-02-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Molecular basis of ion permeability in a voltage-gated sodium channel.
Embo J., 35, 2016
4X89
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BU of 4x89 by Molmil
NavMs voltage-gated sodium channal pore and C-terminal domain soaked with Silver nitrate
分子名称: HEGA-10, Ion transport protein, PENTAETHYLENE GLYCOL, ...
著者Naylor, C.E, Bagneris, C, Wallace, B.A.
登録日2014-12-10
公開日2016-03-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Molecular basis of ion permeability in a voltage-gated sodium channel.
Embo J., 35, 2016
5V16
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HnRNP A1 Alters the Conformation of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation
分子名称: RNA (41-MER)
著者Tolbert, M, Morgan, C.E, Tolbert, B.S.
登録日2017-03-01
公開日2017-07-12
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献HnRNP A1 Alters the Structure of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation.
J. Mol. Biol., 429, 2017
5UVI
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BU of 5uvi by Molmil
Serial Millisecond Crystallography of Membrane and Soluble Protein Micro-crystals using Synchrotron Radiation
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a, ...
著者Martin-Garcia, J.M, Conrad, C.E, Nelson, G, Stander, N, Zatsepin, N.A, Zook, J, Zhu, L, Geiger, J, Chun, E, Kissick, D, Hilgart, M.C, Ogata, C, Ishchenko, A, Nagaratnam, N, Roy-Chowdhury, S, Coe, J, Subramanian, G, Schaffer, A, James, D, Ketawala, G, Venugopalan, N, Xu, S, Corcoran, S, Ferguson, D, Weierstall, U, Spence, J.C.H, Cherezov, V, Fromme, P, Fischetti, R.F, Liu, W.
登録日2017-02-20
公開日2017-05-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Serial millisecond crystallography of membrane and soluble protein microcrystals using synchrotron radiation.
IUCrJ, 4, 2017
5V17
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HnRNP A1 Alters the Conformation of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation
分子名称: RNA (41-MER)
著者Tolbert, M, Morgan, C.E, Tolbert, B.S.
登録日2017-03-01
公開日2017-07-12
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献HnRNP A1 Alters the Structure of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation.
J. Mol. Biol., 429, 2017
5UVJ
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Serial Millisecond Crystallography of Membrane and Soluble Protein Micro-crystals using Synchrotron Radiation
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Martin-Garcia, J.M, Conrad, C.E, Nelson, G, Stander, N, Zatsepin, N.A, Zook, J, Zhu, L, Geiger, J, Chun, E, Kissick, D, Hilgart, M.C, Ogata, C, Ishchenko, A, Nagaratnam, N, Roy-Chowdhury, S, Coe, J, Subramanian, G, Schaffer, A, James, D, Ketawala, G, Venugopalan, N, Xu, S, Corcoran, S, Ferguson, D, Weierstall, U, Spence, J.C.H, Cherezov, V, Fromme, P, Fischetti, R.F, Liu, W.
登録日2017-02-20
公開日2017-05-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Serial millisecond crystallography of membrane and soluble protein microcrystals using synchrotron radiation.
IUCrJ, 4, 2017
5VY9
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S. cerevisiae Hsp104:casein complex, Middle Domain Conformation
分子名称: Alpha-S1-casein, Heat shock protein 104, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
著者Gates, S.N, Yokom, A.L, Lin, J.-B, Jackrel, M.E, Rizo, A.N, Kendsersky, N.M, Buell, C.E, Sweeny, E.A, Chuang, E, Torrente, M.P, Mack, K.L, Su, M, Shorter, J, Southworth, D.R.
登録日2017-05-24
公開日2017-07-19
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (6.7 Å)
主引用文献Ratchet-like polypeptide translocation mechanism of the AAA+ disaggregase Hsp104.
Science, 357, 2017
5W8Q
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Crystal structure of biphenyl synthase from Malus domestica
分子名称: (3R)-butane-1,3-diol, BIS3 biphenyl synthase
著者Stewart Jr, C.E, Noel, J.P.
登録日2017-06-22
公開日2017-12-13
実験手法X-RAY DIFFRACTION (1.173 Å)
主引用文献Molecular architectures of benzoic acid-specific type III polyketide synthases.
Acta Crystallogr D Struct Biol, 73, 2017

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件を2024-06-26に公開中

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