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PDB: 2660 件

4K7H
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Major capsid protein P1 of the Pseudomonas phage phi6
分子名称: Major inner protein P1
著者Boura, E, Nemecek, D, Plevka, P, Steven, C.A, Hurley, J.H.
登録日2013-04-17
公開日2013-08-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.5964 Å)
主引用文献Subunit Folds and Maturation Pathway of a dsRNA Virus Capsid.
Structure, 21, 2013
3TSR
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BU of 3tsr by Molmil
X-ray structure of mouse ribonuclease inhibitor complexed with mouse ribonuclease 1
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Ribonuclease inhibitor, ...
著者Chang, A, Lomax, J.E, Bingman, C.A, Raines, R.T, Phillips Jr, G.N.
登録日2011-09-13
公開日2012-09-19
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.1999 Å)
主引用文献Functional evolution of ribonuclease inhibitor: insights from birds and reptiles.
J.Mol.Biol., 426, 2014
2H0I
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Crystal Structure of DsbG V216M mutant
分子名称: SULFATE ION, Thiol:disulfide interchange protein dsbG
著者Hiniker, A, Heras, B, Martin, J.L, Stuckey, J, Bardwell, J.C.A.
登録日2006-05-15
公開日2007-04-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Short-circuiting divergent evolution: laboratory evolution of one disulfide isomerase to resemble another
To be Published
4LPL
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Structure of CBM32-1 from a family 31 glycoside hydrolase from Clostridium perfringens
分子名称: CALCIUM ION, Glycosyl hydrolase, family 31/fibronectin type III domain protein, ...
著者Grondin, J.M, Duan, D, Heather, F.S, Spencer, C.A, Allingham, J.S, Smith, S.P.
登録日2013-07-16
公開日2014-07-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens.
Plos One, 12, 2017
4LWV
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The 2.3A Crystal Structure of Humanized Xenopus MDM2 with RO5545353
分子名称: (2S,3R,4R,5R)-N-(4-carbamoyl-2-methoxyphenyl)-2'-chloro-4-(3-chloro-2-fluorophenyl)-2-(2,2-dimethylpropyl)-5'-oxo-4',5'-dihydrospiro[pyrrolidine-3,6'-thieno[3,2-b]pyrrole]-5-carboxamide, E3 ubiquitin-protein ligase Mdm2, SULFATE ION
著者Graves, B.J, Lukacs, C, Janson, C.A.
登録日2013-07-28
公開日2014-07-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Discovery of Potent and Orally Active p53-MDM2 Inhibitors RO5353 and RO2468 for Potential Clinical Development.
ACS MED.CHEM.LETT., 5, 2014
3U15
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Structure of hDMX with Dimer Inducing Indolyl Hydantoin RO-2443
分子名称: (5Z)-5-[(6-chloro-7-methyl-1H-indol-3-yl)methylidene]-3-(3,4-difluorobenzyl)imidazolidine-2,4-dione, Protein Mdm4, SULFATE ION
著者Lukacs, C.M, Janson, C.A, Graves, B.J.
登録日2011-09-29
公開日2012-06-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Activation of the p53 pathway by small-molecule-induced MDM2 and MDMX dimerization.
Proc.Natl.Acad.Sci.USA, 109, 2012
1NHT
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BU of 1nht by Molmil
ENTRAPMENT OF 6-THIOPHOSPHORYL-IMP IN THE ACTIVE SITE OF CRYSTALLINE ADENYLOSUCCINATE SYNTHETASE FROM ESCHERICHIA COLI DATA COLLECTED AT 100K
分子名称: 2-DEAZO-6-THIOPHOSPHATE GUANOSINE-5'-MONOPHOSPHATE, ADENYLOSUCCINATE SYNTHETASE, GUANOSINE-5'-DIPHOSPHATE, ...
著者Poland, B.W, Bruns, C.A, Fromm, H.J, Honzatko, R.B.
登録日1997-01-12
公開日1997-10-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Entrapment of 6-thiophosphoryl-IMP in the active site of crystalline adenylosuccinate synthetase from Escherichia coli.
J.Biol.Chem., 272, 1997
2OZQ
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BU of 2ozq by Molmil
Crystal Structure of apo-MUP
分子名称: CADMIUM ION, Novel member of the major urinary protein (Mup) gene family, SODIUM ION
著者Dennis, C.A, Homans, S.W, Phillips, S.E.V, Syme, N.R.
登録日2007-02-27
公開日2008-01-15
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Origin of heat capacity changes in a "nonclassical" hydrophobic interaction.
Chembiochem, 8, 2007
2FKM
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PMM/PGM S108D mutant with alpha-d-glucose 1,6-bisphosphate bound
分子名称: 1,6-di-O-phosphono-alpha-D-glucopyranose, Phosphomannomutase/phosphoglucomutase, ZINC ION
著者Regni, C.A, Beamer, L.J.
登録日2006-01-04
公開日2006-04-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The reaction of phosphohexomutase from Pseudomonas aeruginosa: structural insights into a simple processive enzyme.
J.Biol.Chem., 281, 2006
4LQR
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Structure of CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens
分子名称: CALCIUM ION, Glycosyl hydrolase, family 31/fibronectin type III domain protein
著者Grondin, J.M, Furness, H.S, Duan, D, Spencer, C.A, Allingham, J.S, Smith, S.P.
登録日2013-07-19
公開日2014-07-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens.
Plos One, 12, 2017
2JSX
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BU of 2jsx by Molmil
Solution structure of the E. coli Tat proofreading chaperone protein NapD
分子名称: Protein napD
著者Spronk, C.A.E.M, Vuister, G.W, Sargent, F.
登録日2007-07-17
公開日2007-08-21
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Structural diversity in twin-arginine signal peptide-binding proteins.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2K0D
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BU of 2k0d by Molmil
NMR structure of a mutant colicin e7 immunity protein im7 with an extended helix III
分子名称: Colicin-E7 immunity protein
著者Figueiredo, A.M, Whittaker, S.B, Knowling, S.E, Spronk, C.A, Radford, S.E, Moore, G.R.
登録日2008-02-01
公開日2009-01-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Amino acid insertion reveals a necessary three-helical intermediate in the folding pathway of the colicin E7 immunity protein Im7.
J.Mol.Biol., 392, 2009
4IAG
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BU of 4iag by Molmil
Crystal structure of ZbmA, the zorbamycin binding protein from Streptomyces flavoviridis
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Zbm binding protein
著者Cuff, M.E, Bigelow, L, Bruno, C.J.P, Clancy, S, Babnigg, G, Bingman, C.A, Yennamalli, R, Lohman, J, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2012-12-06
公開日2013-02-20
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of the Zorbamycin-Binding Protein ZbmA, the Primary Self-Resistance Element in Streptomyces flavoviridis ATCC21892.
Biochemistry, 54, 2015
4I4J
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BU of 4i4j by Molmil
The structure of SgcE10, the ACP-polyene thioesterase involved in C-1027 biosynthesis
分子名称: 1,2-ETHANEDIOL, ACP-polyene thioesterase, D(-)-TARTARIC ACID, ...
著者Kim, Y, Bigelow, L, Bearden, J, Babnigg, J, Bingman, C.A, Yennamalli, R, Lohman, J, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2012-11-27
公開日2012-12-12
最終更新日2022-05-04
実験手法X-RAY DIFFRACTION (2.784 Å)
主引用文献Crystal Structure of Thioesterase SgcE10 Supporting Common Polyene Intermediates in 9- and 10-Membered Enediyne Core Biosynthesis.
Acs Omega, 2, 2017
2Q32
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Crystal structure of human heme oxygenase-2 C127A (HO-2)
分子名称: Heme oxygenase 2, OXTOXYNOL-10
著者Bianchetti, C.M, Bingman, C.A, Bitto, E, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
登録日2007-05-29
公開日2007-06-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Comparison of Apo- and Heme-bound Crystal Structures of a Truncated Human Heme Oxygenase-2.
J.Biol.Chem., 282, 2007
7K34
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Crystal structure of L-threonine transaldolase from Pseudomonas fluorescens in internal aldimine state
分子名称: SULFATE ION, Threonine aldolase
著者Kumar, P, Bingman, C.A, Buller, A.R.
登録日2020-09-10
公開日2020-12-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献l-Threonine Transaldolase Activity Is Enabled by a Persistent Catalytic Intermediate.
Acs Chem.Biol., 16, 2021
6PAZ
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OXIDIZED MUTANT P80I PSEUDOAZURIN FROM A. FAECALIS
分子名称: COPPER (II) ION, PSEUDOAZURIN
著者Adman, E.T, Libeu, C.A.P.
登録日1997-02-21
公開日1997-08-20
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Site-directed mutants of pseudoazurin: explanation of increased redox potentials from X-ray structures and from calculation of redox potential differences.
Biochemistry, 36, 1997
7K1M
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Peptide from stony coral Heliofungia actiniformis: Hact-1
分子名称: GLY-CYS-HIS-TYR-THR-PRO-PHE-GLY-LEU-ILE-CYS-PHE peptide
著者Daly, N.L, Schmidt, C.A.
登録日2020-09-08
公開日2020-11-25
最終更新日2024-10-16
実験手法SOLUTION NMR
主引用文献Identification and Characterization of a Peptide from the Stony Coral Heliofungia actiniformis .
J.Nat.Prod., 83, 2020
7KEQ
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avibactam-CDD-1 6 minute complex
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, (2S,5R)-7-oxo-6-(sulfooxy)-1,6-diazabicyclo[3.2.1]octane-2-carboxamide, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
著者Smith, C.A, Vakulenko, S.B, Stewart, N.K, Toth, M.
登録日2020-10-11
公開日2021-01-20
最終更新日2021-05-26
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Inhibition of the Clostridioides difficile Class D beta-Lactamase CDD-1 by Avibactam.
Acs Infect Dis., 7, 2021
7KG3
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Crystal structure of CoV-2 Nsp3 Macrodomain
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, MALONATE ION, ...
著者Arvai, A, Brosey, C.A, Link, T, Jones, D.E, Ahmed, Z, Tainer, J.A.
登録日2020-10-15
公開日2020-10-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021
7KER
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avibactam-CDD-1 45 minute complex
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, (2S,5R)-7-oxo-6-(sulfooxy)-1,6-diazabicyclo[3.2.1]octane-2-carboxamide, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
著者Smith, C.A, Vakulenko, S.B, Stewart, N.K, Toth, M.
登録日2020-10-12
公開日2021-01-20
最終更新日2021-05-26
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Inhibition of the Clostridioides difficile Class D beta-Lactamase CDD-1 by Avibactam.
Acs Infect Dis., 7, 2021
7L0D
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SARS-CoV-2 Main Protease (Mpro) in Complex with ML188
分子名称: 3C-like proteinase, N-[(1R)-2-(tert-butylamino)-2-oxo-1-(pyridin-3-yl)ethyl]-N-(4-tert-butylphenyl)furan-2-carboxamide
著者Lockbaum, G.J, Lee, J.M, Reyes, A.C, Nalivaika, E.A, Ali, A, Yilmaz, N.K, Thompson, P.R, Schiffer, C.A.
登録日2020-12-11
公開日2021-02-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Crystal Structure of SARS-CoV-2 Main Protease in Complex with the Non-Covalent Inhibitor ML188.
Viruses, 13, 2021
7KXB
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Crystal structure of SARS-CoV-2 Nsp3 Macrodomain complex with PARG329
分子名称: BETA-MERCAPTOETHANOL, N-{3-[(1,3-dimethyl-2,6-dioxo-2,3,6,9-tetrahydro-1H-purin-8-yl)sulfanyl]propyl}-N'-[2-(morpholin-4-yl)ethyl]thiourea, Non-structural protein 3, ...
著者Arvai, A, Brosey, C.A, Bommagani, S, Link, T, Jones, D.E, Ahmed, Z, Tainer, J.A.
登録日2020-12-03
公開日2021-02-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021
7KG1
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Structure of human PARG complexed with PARG-002
分子名称: 1,3-dimethyl-8-{[2-(morpholin-4-yl)ethyl]amino}-3,7-dihydro-1H-purine-2,6-dione, CACODYLATE ION, DIMETHYL SULFOXIDE, ...
著者Brosey, C.A, Balapiti-Modarage, L.P.F, Warden, L.S, Jones, D.E, Ahmed, Z, Tainer, J.A.
登録日2020-10-15
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021
7KG7
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Structure of human PARG complexed with PARG-292
分子名称: 8-{[2-(1,1-dioxo-1lambda~6~,4-thiazinan-4-yl)ethyl]sulfanyl}-1,3-dimethyl-3,7-dihydro-1H-purine-2,6-dione, DIMETHYL SULFOXIDE, Poly(ADP-ribose) glycohydrolase, ...
著者Brosey, C.A, Balapiti-Modarage, L.P.F, Warden, L.S, Jones, D.E, Ahmed, Z, Tainer, J.A.
登録日2020-10-16
公開日2021-03-10
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021

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