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PDB: 35 件

4N1U
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BU of 4n1u by Molmil
Structure of human MTH1 in complex with TH588
分子名称: 7,8-dihydro-8-oxoguanine triphosphatase, N~4~-cyclopropyl-6-(2,3-dichlorophenyl)pyrimidine-2,4-diamine, SULFATE ION
著者Berntsson, R.P.-A, Jemth, A, Gustafsson, R, Svensson, L.M, Helleday, T, Stenmark, P.
登録日2013-10-04
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献MTH1 inhibition eradicates cancer by preventing sanitation of the dNTP pool.
Nature, 508, 2014
4N1T
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BU of 4n1t by Molmil
Structure of human MTH1 in complex with TH287
分子名称: 6-(2,3-dichlorophenyl)-N~4~-methylpyrimidine-2,4-diamine, 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION
著者Berntsson, R.P.-A, Jemth, A, Gustafsson, R, Svensson, L.M, Helleday, T, Stenmark, P.
登録日2013-10-04
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献MTH1 inhibition eradicates cancer by preventing sanitation of the dNTP pool.
Nature, 508, 2014
5TPB
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BU of 5tpb by Molmil
Binding domain of BoNT/A complexed with ganglioside variant
分子名称: Botulinum neurotoxin type A, N-acetyl-alpha-neuraminic acid, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose
著者Berntsson, R.P.-A, Svensson, L.M, Stenmark, P.
登録日2016-10-20
公開日2017-01-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Glycans Confer Specificity to the Recognition of Ganglioside Receptors by Botulinum Neurotoxin A.
J. Am. Chem. Soc., 139, 2017
5TPC
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BU of 5tpc by Molmil
Binding domain of BoNT/A complexed with ganglioside
分子名称: Botulinum neurotoxin type A, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose
著者Berntsson, R.P.-A, Svensson, L.M, Stenmark, P.
登録日2016-10-20
公開日2017-01-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Glycans Confer Specificity to the Recognition of Ganglioside Receptors by Botulinum Neurotoxin A.
J. Am. Chem. Soc., 139, 2017
4DVE
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BU of 4dve by Molmil
Crystal structure at 2.1 A of the S-component for biotin from an ECF-type ABC transporter
分子名称: BIOTIN, Biotin transporter BioY, nonyl beta-D-glucopyranoside
著者Berntsson, R.P.-A, ter Beek, J, Majsnerowska, M, Duurkens, R, Puri, P, Poolman, B, Slotboom, D.J.
登録日2012-02-23
公開日2012-08-29
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural divergence of paralogous S components from ECF-type ABC transporters.
Proc.Natl.Acad.Sci.USA, 109, 2012
4FAJ
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BU of 4faj by Molmil
Structure and mode of peptide binding of pheromone receptor PrgZ
分子名称: GLYCEROL, PrgZ, Sex pheromone cCF10, ...
著者Berntsson, R.P.-A, Schuurman-Wolters, G.K, Dunny, K, Slotboom, D.J, Poolman, B.
登録日2012-05-22
公開日2012-09-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and Mode of Peptide Binding of Pheromone Receptor PrgZ.
J.Biol.Chem., 287, 2012
5LR0
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BU of 5lr0 by Molmil
Binding domain of Botulinum Neurotoxin DC in complex with SialylT
分子名称: Botulinum neurotoxin D/C protein, N-acetyl-alpha-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, ...
著者Berntsson, R.P.-A, Stenmark, P.
登録日2016-08-18
公開日2017-08-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Structural basis for the unique ganglioside and cell membrane recognition mechanism of botulinum neurotoxin DC.
Nat Commun, 8, 2017
3RYB
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BU of 3ryb by Molmil
Lactococcal OppA complexed with SLSQSLSQS
分子名称: Oligopeptide, Oligopeptide-binding protein oppA
著者Berntsson, R.P.-A, Thunnissen, A.-M.W.H, Poolman, B, Slotboom, D.-J.
登録日2011-05-11
公開日2011-06-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Importance of a Hydrophobic Pocket for Peptide Binding in Lactococcal OppA.
J.Bacteriol., 193, 2011
3RYA
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BU of 3rya by Molmil
Lactococcal OppA complexed with SLSQLSSQS
分子名称: Oligopeptide, Oligopeptide-binding protein oppA
著者Berntsson, R.P.-A, Thunnissen, A.-M.W.H, Poolman, B, Slotboom, D.-J.
登録日2011-05-11
公開日2011-06-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Importance of a Hydrophobic Pocket for Peptide Binding in Lactococcal OppA.
J.Bacteriol., 193, 2011
4ISR
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BU of 4isr by Molmil
Binding domain of Botulinum neurotoxin DC in complex with rat synaptotagmin II
分子名称: Neurotoxin, SULFATE ION, Synaptotagmin-2
著者Berntsson, R.P.-A, Peng, L, Svensson, L.M, Dong, M, Stenmark, P.
登録日2013-01-17
公開日2013-08-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Crystal Structures of Botulinum Neurotoxin DC in Complex with Its Protein Receptors Synaptotagmin I and II.
Structure, 21, 2013
4ISQ
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BU of 4isq by Molmil
Binding domain of Botulinum neurotoxin DC in complex with human synaptotagmin I
分子名称: GLYCEROL, Neurotoxin, SULFATE ION, ...
著者Berntsson, R.P.-A, Peng, L, Svensson, L.M, Dong, M, Stenmark, P.
登録日2013-01-17
公開日2013-08-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal Structures of Botulinum Neurotoxin DC in Complex with Its Protein Receptors Synaptotagmin I and II.
Structure, 21, 2013
4KA7
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BU of 4ka7 by Molmil
Structure of Organellar OligoPeptidase (E572Q) in complex with an endogenous substrate
分子名称: CHLORIDE ION, GLYCEROL, Oligopeptidase A, ...
著者Berntsson, R.P.-A, Kmiec, B, Teixeira, P.F, Svensson, L.M, Bakali, A, Glaser, E, Stenmark, P.
登録日2013-04-22
公開日2013-09-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Organellar oligopeptidase (OOP) provides a complementary pathway for targeting peptide degradation in mitochondria and chloroplasts.
Proc. Natl. Acad. Sci. U.S.A., 110, 2013
4LHF
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BU of 4lhf by Molmil
Crystal structure of a DNA binding protein from phage P2
分子名称: Regulatory protein cox
著者Berntsson, R.P.-A, Odegrip, R, Sehlen, W, Skaar, K, Svensson, L.M, Massad, T, Haggard-Ljungquist, E, Stenmark, P.
登録日2013-07-01
公開日2014-03-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Structural insight into DNA binding and oligomerization of the multifunctional Cox protein of bacteriophage P2.
Nucleic Acids Res., 42, 2014
4KA8
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BU of 4ka8 by Molmil
Structure of Organellar OligoPeptidase
分子名称: CHLORIDE ION, GLYCEROL, Oligopeptidase A, ...
著者Berntsson, R.P.-A, Kmiec, B, Teixeira, P.F, Svensson, L.M, Bakali, A, Glaser, E, Stenmark, P.
登録日2013-04-22
公開日2013-09-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Organellar oligopeptidase (OOP) provides a complementary pathway for targeting peptide degradation in mitochondria and chloroplasts.
Proc. Natl. Acad. Sci. U.S.A., 110, 2013
3FTO
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BU of 3fto by Molmil
Crystal structure of OppA in a open conformation
分子名称: Oligopeptide-binding protein oppA
著者Berntsson, R.P.-A, Oktaviani, N.A, Fusetti, F, Thunnissen, A.-M.W.H, Poolman, B, Slotboom, D.-J.
登録日2009-01-13
公開日2009-03-31
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Selenomethionine incorporation in proteins expressed in Lactococcus lactis.
Protein Sci., 18, 2009
3DRI
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BU of 3dri by Molmil
Crystal structure of Lactococcal OppA co-crystallized with an octamer peptide in an open conformation
分子名称: Oligopeptide-binding protein oppA, peptide AASASA
著者Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J.
登録日2008-07-11
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structural basis for peptide selection by the transport receptor OppA
Embo J., 28, 2009
3DRJ
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BU of 3drj by Molmil
Crystal structure of Lactococcal OppA co-crystallized with pTH-related peptide in an open conformation
分子名称: Oligopeptide-binding protein oppA, pTH-related peptide
著者Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J.
登録日2008-07-11
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The structural basis for peptide selection by the transport receptor OppA
Embo J., 28, 2009
3DRH
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BU of 3drh by Molmil
Crystal structure of Lactococcal OppA co-crystallized with Leu-enkephalin in an open conformation
分子名称: Oligopeptide-binding protein oppA, peptide AAAAAA
著者Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J.
登録日2008-07-11
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The structural basis for peptide selection by the transport receptor OppA
Embo J., 28, 2009
3DRF
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BU of 3drf by Molmil
Lactococcal OppA complexed with an endogenous peptide in the closed conformation
分子名称: Oligopeptide-binding protein oppA, endogenous peptide
著者Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J.
登録日2008-07-11
公開日2009-03-31
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The structural basis for peptide selection by the transport receptor OppA
Embo J., 28, 2009
3DRG
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BU of 3drg by Molmil
Lactococcal OppA complexed with bradykinin in the closed conformation
分子名称: Bradykinin, CHLORIDE ION, Oligopeptide-binding protein oppA
著者Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J.
登録日2008-07-11
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The structural basis for peptide selection by the transport receptor OppA
Embo J., 28, 2009
3DRK
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BU of 3drk by Molmil
Crystal structure of Lactococcal OppA co-crystallized with Neuropeptide S in an open conformation
分子名称: Neuropeptide S, Oligopeptide-binding protein oppA
著者Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J.
登録日2008-07-11
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structural basis for peptide selection by the transport receptor OppA
Embo J., 28, 2009
8A1B
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BU of 8a1b by Molmil
TraI trans-esterase domain from pKM101 (apo)
分子名称: CHLORIDE ION, GLYCEROL, MANGANESE (II) ION, ...
著者Breidenstein, A, Berntsson, R.P.-A.
登録日2022-06-01
公開日2022-07-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and functional characterization of TraI from pKM101 reveals basis for DNA processing.
Life Sci Alliance, 6, 2023
8A1C
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BU of 8a1c by Molmil
TraI trans-esterase domain from pKM101 (DNA bound)
分子名称: 11mer oriT DNA, MANGANESE (II) ION, TraI
著者Breidenstein, A, Berntsson, R.P.-A.
登録日2022-06-01
公開日2022-07-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and functional characterization of TraI from pKM101 reveals basis for DNA processing.
Life Sci Alliance, 6, 2023
8BEG
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BU of 8beg by Molmil
Structure of Ig-like domains from PrgB
分子名称: MAGNESIUM ION, PrgB
著者Jarva, M, Schmitt, A, Berntsson, R.P.-A.
登録日2022-10-21
公開日2022-11-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural foundation for the role of enterococcal PrgB in conjugation, biofilm formation, and virulence.
Elife, 12, 2023
8S0U
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BU of 8s0u by Molmil
Structure of the LytM domain of PrgK from E. faecalis
分子名称: PrgK
著者Sun, W.-S, Berntsson, R.P.-A.
登録日2024-02-14
公開日2024-02-28
最終更新日2024-08-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Breaking barriers: pCF10 type 4 secretion system relies on a self-regulating muramidase to modulate the cell wall.
Mbio, 15, 2024

 

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