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PDB: 79 件
1X9S
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BU of 1x9s by Molmil
T7 DNA polymerase in complex with a primer/template DNA containing a disordered N-2 aminofluorene on the template, crystallized with dideoxy-CTP as the incoming nucleotide.
分子名称: 5'-D(*CP*CP*CP*(AFG)P*AP*TP*CP*AP*CP*AP*CP*TP*AP*CP*CP*AP*AP*TP*CP*AP*CP*TP*CP*TP*CP*C)-3', 5'-D(*GP*GP*AP*GP*AP*GP*TP*GP*AP*TP*T*GP*GP*TP*AP*GP*TP*GP*TP*GP*AP*(2DT))-3', DNA polymerase, ...
著者Dutta, S, Li, Y, Johnson, D, Dzantiev, L, Richardson, C.C, Romano, L.J, Ellenberger, T.
登録日2004-08-24
公開日2004-10-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures of 2-acetylaminofluorene and 2-aminofluorene in complex with T7 DNA polymerase reveal mechanisms of mutagenesis.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1SL1
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BU of 1sl1 by Molmil
Binary 5' complex of T7 DNA polymerase with a DNA primer/template containing a cis-syn thymine dimer on the template
分子名称: 5'-D(*CP*CP*C*(TTD)P*AP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', 5'-D(*CP*GP*AP*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*TP*(2DA))-3', DNA polymerase, ...
著者Li, Y, Dutta, S, Doublie, S, Bdour, H.M, Taylor, J.S, Ellenberger, T.
登録日2004-03-05
公開日2004-07-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Nucleotide insertion opposite a cis-syn thymine dimer by a replicative DNA polymerase from bacteriophage T7.
Nat.Struct.Mol.Biol., 11, 2004
1DIZ
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BU of 1diz by Molmil
CRYSTAL STRUCTURE OF E. COLI 3-METHYLADENINE DNA GLYCOSYLASE (ALKA) COMPLEXED WITH DNA
分子名称: 3-METHYLADENINE DNA GLYCOSYLASE II, DNA (5'-D(*GP*AP*CP*AP*TP*GP*AP*(NRI)P*TP*GP*CP*CP*T)-3'), DNA (5'-D(*GP*GP*CP*AP*AP*TP*CP*AP*TP*GP*TP*CP*A)-3'), ...
著者Hollis, T, Ichikawa, Y, Ellenberger, T.E.
登録日1999-11-30
公開日2000-03-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献DNA bending and a flip-out mechanism for base excision by the helix-hairpin-helix DNA glycosylase, Escherichia coli AlkA.
EMBO J., 19, 2000
5KVH
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BU of 5kvh by Molmil
Crystal structure of human apoptosis-inducing factor with W196A mutation
分子名称: Apoptosis-inducing factor 1, mitochondrial, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Brosey, C.A, Nix, J, Ellenberger, T, Tainer, J.A.
登録日2016-07-14
公開日2016-11-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.273 Å)
主引用文献Defining NADH-Driven Allostery Regulating Apoptosis-Inducing Factor.
Structure, 24, 2016
5KVI
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BU of 5kvi by Molmil
Crystal structure of monomeric human apoptosis-inducing factor with E413A/R422A/R430A mutations
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Apoptosis-inducing factor 1, mitochondrial, ...
著者Brosey, C.A, Nix, J, Ellenberger, T, Tainer, J.A.
登録日2016-07-14
公開日2016-11-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.995 Å)
主引用文献Defining NADH-Driven Allostery Regulating Apoptosis-Inducing Factor.
Structure, 24, 2016
3L2P
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BU of 3l2p by Molmil
Human DNA Ligase III Recognizes DNA Ends by Dynamic Switching Between Two DNA Bound States
分子名称: 5'-D(*GP*CP*CP*AP*GP*TP*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*CP*CP*G)-3', 5'-D(*GP*TP*CP*GP*GP*AP*CP*TP*G)-3', 5'-D(P*CP*GP*GP*GP*AP*TP*GP*CP*GP*TP*C)-3', ...
著者Cotner-Gohara, E.A, Kim, I.K, Hammel, M, Tainer, J.A, Tomkinson, A, Ellenberger, T.
登録日2009-12-15
公開日2010-07-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Human DNA Ligase III Recognizes DNA Ends by Dynamic Switching between Two DNA-Bound States.
Biochemistry, 49, 2010
1Z1B
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BU of 1z1b by Molmil
Crystal structure of a lambda integrase dimer bound to a COC' core site
分子名称: 26-MER DNA, 29-MER DNA, 5'-D(*CP*T*CP*GP*TP*TP*CP*AP*GP*CP*TP*TP*TP*TP*TP*T)-3', ...
著者Biswas, T, Aihara, H, Radman-Livaja, M, Filman, D, Landy, A, Ellenberger, T.
登録日2005-03-03
公開日2005-06-28
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献A structural basis for allosteric control of DNA recombination by lambda integrase.
Nature, 435, 2005
1BNK
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BU of 1bnk by Molmil
HUMAN 3-METHYLADENINE DNA GLYCOSYLASE COMPLEXED TO DNA
分子名称: DNA (5'-D(*GP*AP*CP*AP*TP*GP*YRRP*TP*TP*GP*CP*CP*T)-3'), DNA (5'-D(*GP*GP*CP*AP*AP*TP*CP*AP*TP*GP*TP*CP*A)-3'), PROTEIN (3-METHYLADENINE DNA GLYCOSYLASE)
著者Lau, A.Y, Schaerer, O.D, Samson, L, Verdine, G.L, Ellenberger, T.
登録日1998-07-29
公開日1998-10-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of a human alkylbase-DNA repair enzyme complexed to DNA: mechanisms for nucleotide flipping and base excision.
Cell(Cambridge,Mass.), 95, 1998
1NUI
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BU of 1nui by Molmil
Crystal Structure of the primase fragment of Bacteriophage T7 primase-helicase protein
分子名称: DNA primase/helicase, MAGNESIUM ION, ZINC ION
著者Kato, M, Ito, T, Wagner, G, Richardson, C.C, Ellenberger, T.
登録日2003-01-31
公開日2003-05-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Modular Architecture of the Bacteriophage T7 Primase Couples RNA primer Synthesis to DNA Synthesis
Mol.Cell, 11, 2003
1JE5
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BU of 1je5 by Molmil
Crystal Structure of gp2.5, a Single-Stranded DNA Binding Protein Encoded by Bacteriophage T7
分子名称: CALCIUM ION, HELIX-DESTABILIZING PROTEIN
著者Hollis, T, Stattel, J.M, Walther, D.S, Richardson, C.C, Ellenberger, T.E.
登録日2001-06-15
公開日2001-08-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the gene 2.5 protein, a single-stranded DNA binding protein encoded by bacteriophage T7.
Proc.Natl.Acad.Sci.USA, 98, 2001
5IKN
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BU of 5ikn by Molmil
Crystal Structure of the T7 Replisome in the Absence of DNA
分子名称: DNA primase/helicase, DNA-directed DNA polymerase, Thioredoxin-1
著者Wallen, J.R, Ellenberger, T.
登録日2016-03-03
公開日2016-12-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (4.802 Å)
主引用文献Hybrid Methods Reveal Multiple Flexibly Linked DNA Polymerases within the Bacteriophage T7 Replisome.
Structure, 25, 2017
2ONT
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BU of 2ont by Molmil
A swapped dimer of the HIV-1 capsid C-terminal domain
分子名称: Capsid protein p24
著者Ivanov, D, Tsodikov, O.V, Kasanov, J, Ellenberger, T, Wagner, G, Collins, T.
登録日2007-01-24
公開日2007-02-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Domain-swapped dimerization of the HIV-1 capsid C-terminal domain
Proc.Natl.Acad.Sci.Usa, 104, 2007
1T8E
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BU of 1t8e by Molmil
T7 DNA Polymerase Ternary Complex with dCTP at the Insertion Site.
分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 25-MER, ...
著者Brieba, L.G, Eichman, B.F, Kokoska, R.J, Doublie, S, Kunkel, T.A, Ellenberger, T.
登録日2004-05-12
公開日2004-10-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase.
Embo J., 23, 2004
5EWP
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BU of 5ewp by Molmil
ARO (armadillo repeats only protein) from Plasmodium falciparum
分子名称: ARO (armadillo repeats only protein)
著者Brown, C, Zhang, K, Emery, J, Prusty, D, Wetzel, J, Heincke, D, Gilberger, T, Junop, M.
登録日2015-11-20
公開日2016-01-27
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献ARO (armadillo repeats only protein) from Plasmodium falciparum
To Be Published
1X9W
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BU of 1x9w by Molmil
T7 DNA polymerase in complex with a primer/template DNA containing a disordered N-2 aminofluorene on the template, crystallized with dideoxy-ATP as the incoming nucleotide.
分子名称: 5'-D(*CP*CP*CP*(AFG)*AP*TP*CP*AP*CP*AP*CP*TP*AP*CP*CP*AP*AP*TP*CP*AP*CP*TP*CP*TP*CP*C)-3', 5'-D(*GP*GP*AP*GP*AP*GP*TP*GP*AP*TP*T*GP*GP*T*AP*GP*TP*GP*TP*GP*AP*(2DT))-3', DNA polymerase, ...
著者Dutta, S, Li, Y, Johnson, D, Dzantiev, L, Richardson, C.C, Romano, L.J, Ellenberger, T.
登録日2004-08-24
公開日2004-10-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of 2-acetylaminofluorene and 2-aminofluorene in complex with T7 DNA polymerase reveal mechanisms of mutagenesis.
Proc.Natl.Acad.Sci.Usa, 101, 2004
6WH1
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BU of 6wh1 by Molmil
Structure of the complex of human DNA ligase III-alpha and XRCC1 BRCT domains
分子名称: DNA ligase 3 alpha, X-ray repair cross complementing protein 1 variant
著者Pourfarjam, Y, Ellenberger, T, Tainer, J.A, Tomkinson, A.E, Kim, I.K.
登録日2020-04-07
公開日2020-12-02
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献An atypical BRCT-BRCT interaction with the XRCC1 scaffold protein compacts human DNA Ligase III alpha within a flexible DNA repair complex.
Nucleic Acids Res., 49, 2021
6WH2
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BU of 6wh2 by Molmil
Structure of the C-terminal BRCT domain of human XRCC1
分子名称: X-ray repair cross complementing protein 1 variant
著者Pourfarjam, Y, Ellenberger, T, Tainer, J.A, Tomkinson, A.E, Kim, I.K.
登録日2020-04-07
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.414 Å)
主引用文献An atypical BRCT-BRCT interaction with the XRCC1 scaffold protein compacts human DNA Ligase III alpha within a flexible DNA repair complex.
Nucleic Acids Res., 49, 2021
1Z19
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BU of 1z19 by Molmil
Crystal structure of a lambda integrase(75-356) dimer bound to a COC' core site
分子名称: 33-MER, 5'-D(*CP*TP*CP*GP*TP*TP*CP*AP*GP*CP*TP*TP*TP*TP*TP*T)-3', 5'-D(P*TP*TP*TP*AP*TP*AP*CP*TP*AP*AP*GP*TP*TP*GP*GP*CP*AP*TP*TP*A)-3', ...
著者Biswas, T, Aihara, H, Radman-Livaja, M, Filman, D, Landy, A, Ellenberger, T.
登録日2005-03-03
公開日2005-06-28
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A structural basis for allosteric control of DNA recombination by lambda integrase.
Nature, 435, 2005
1P7D
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BU of 1p7d by Molmil
Crystal structure of the Lambda Integrase (residues 75-356) bound to DNA
分子名称: 26-MER, 5'-D(*CP*AP*AP*TP*GP*CP*CP*AP*AP*CP*TP*TP*T)-3', Integrase
著者Aihara, H, Kwon, H.J, Nunes-Duby, S.E, Landy, A, Ellenberger, T.
登録日2003-05-01
公開日2003-08-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献A Conformational Switch Controls the DNA Cleavage Activity of Lambda Integrase
Mol.Cell, 12, 2003
1Z1G
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BU of 1z1g by Molmil
Crystal structure of a lambda integrase tetramer bound to a Holliday junction
分子名称: 25-MER, 29-MER, 5'-D(*AP*CP*AP*GP*GP*TP*CP*AP*CP*TP*AP*TP*CP*AP*GP*TP*CP*AP*AP*AP*AP*TP*AP*CP*C)-3', ...
著者Biswas, T, Aihara, H, Radman-Livaja, M, Filman, D, Landy, A, Ellenberger, T.
登録日2005-03-03
公開日2005-06-28
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (4.4 Å)
主引用文献A structural basis for allosteric control of DNA recombination by lambda integrase.
Nature, 435, 2005
1CR1
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BU of 1cr1 by Molmil
CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF THE GENE 4 PROTEIN OF BACTERIOPHAGE T7: COMPLEX WITH DTTP
分子名称: DNA PRIMASE/HELICASE, SULFATE ION, THYMIDINE-5'-TRIPHOSPHATE
著者Sawaya, M.R, Guo, S, Tabor, S, Richardson, C.C, Ellenberger, T.
登録日1999-08-12
公開日1999-11-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.
Cell(Cambridge,Mass.), 99, 1999
1CR4
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BU of 1cr4 by Molmil
CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF THE GENE 4 PROTEIN OF BACTERIOPHAGE T7: COMPLEX WITH DTDP
分子名称: DNA PRIMASE/HELICASE, SULFATE ION, THYMIDINE-5'-DIPHOSPHATE
著者Sawaya, M.R, Guo, S, Tabor, S, Richardson, C.C, Ellenberger, T.
登録日1999-08-12
公開日1999-11-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.
Cell(Cambridge,Mass.), 99, 1999
1CR2
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BU of 1cr2 by Molmil
CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF THE GENE 4 PROTEIN OF BACTERIOPHAGE T7: COMPLEX WITH DATP
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA PRIMASE/HELICASE, SULFATE ION
著者Sawaya, M.R, Guo, S, Tabor, S, Richardson, C.C, Ellenberger, T.
登録日1999-08-12
公開日1999-11-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.
Cell(Cambridge,Mass.), 99, 1999
1D5Y
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BU of 1d5y by Molmil
CRYSTAL STRUCTURE OF THE E. COLI ROB TRANSCRIPTION FACTOR IN COMPLEX WITH DNA
分子名称: DNA (5'-D(*AP*CP*TP*TP*TP*GP*AP*CP*AP*TP*TP*CP*AP*GP*TP*GP*CP*TP*GP*TP*C)-3'), DNA (5'-D(*TP*GP*AP*CP*AP*GP*CP*AP*CP*TP*GP*AP*AP*TP*GP*TP*CP*AP*AP*AP*G)-3'), ROB TRANSCRIPTION FACTOR
著者Kwon, H.J, Bennik, M.H.J, Demple, B, Ellenberger, T.
登録日1999-10-12
公開日2000-04-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the Escherichia coli Rob transcription factor in complex with DNA.
Nat.Struct.Biol., 7, 2000
1F4R
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CRYSTAL STRUCTURE OF THE HUMAN AAG DNA REPAIR GLYCOSYLASE COMPLEXED WITH 1,N6-ETHENOADENINE-DNA
分子名称: 3-METHYL-ADENINE DNA GLYCOSYLASE, DNA (5'-D(*GP*AP*CP*AP*TP*GP*(EDA)P*TP*TP*GP*CP*CP*T)-3'), DNA (5'-D(*GP*GP*CP*AP*AP*TP*CP*AP*TP*GP*TP*CP*A)-3'), ...
著者Lau, A.Y, Wyatt, M.D, Glassner, B.J, Samson, L.D, Ellenberger, T.
登録日2000-06-08
公開日2000-12-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular basis for discriminating between normal and damaged bases by the human alkyladenine glycosylase, AAG.
Proc.Natl.Acad.Sci.USA, 97, 2000

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