1L8Q
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5JJI
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![BU of 5jji by Molmil](/molmil-images/mine/5jji) | Rho transcription termination factor bound to rU7 and 6 ADP-BeF3 molecules | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ... | Authors: | Thomsen, N.D, Lawson, M.R, Witkowsky, L.B, Qu, S, Berger, J.M. | Deposit date: | 2016-04-24 | Release date: | 2016-11-16 | Last modified: | 2019-12-25 | Method: | X-RAY DIFFRACTION (2.601 Å) | Cite: | Molecular mechanisms of substrate-controlled ring dynamics and substepping in a nucleic acid-dependent hexameric motor. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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5JJL
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![BU of 5jjl by Molmil](/molmil-images/mine/5jjl) | Rho transcription termination factor bound to rU8 and 5 ADP-BeF3 molecules | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ... | Authors: | Thomsen, N.D, Lawson, M.R, Witkowsky, L.B, Qu, S, Berger, J.M. | Deposit date: | 2016-04-24 | Release date: | 2016-11-16 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | Molecular mechanisms of substrate-controlled ring dynamics and substepping in a nucleic acid-dependent hexameric motor. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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5JJK
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![BU of 5jjk by Molmil](/molmil-images/mine/5jjk) | Rho transcription termination factor bound to rA7 and 6 ADP-BeF3 molecules | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ... | Authors: | Thomsen, N.D, Lawson, M.R, Witkowsky, L.B, Qu, S, Berger, J.M. | Deposit date: | 2016-04-24 | Release date: | 2016-11-16 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (3.15 Å) | Cite: | Molecular mechanisms of substrate-controlled ring dynamics and substepping in a nucleic acid-dependent hexameric motor. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
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1ROC
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![BU of 1roc by Molmil](/molmil-images/mine/1roc) | Crystal structure of the histone deposition protein Asf1 | Descriptor: | Anti-silencing protein 1, BROMIDE ION | Authors: | Daganzo, S.M, Erzberger, J.P, Lam, W.M, Skordalakes, E, Zhang, R, Franco, A.A, Brill, S.J, Adams, P.D, Berger, J.M, Kaufman, P.D. | Deposit date: | 2003-12-02 | Release date: | 2003-12-23 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Structure and function of the conserved core of histone deposition protein Asf1. Curr.Biol., 13, 2003
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3EC2
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![BU of 3ec2 by Molmil](/molmil-images/mine/3ec2) | Crystal structure of the DnaC helicase loader | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, DNA replication protein DnaC, MAGNESIUM ION | Authors: | Mott, M.L, Erzberger, J.P, Coons, M.M, Berger, J.M. | Deposit date: | 2008-08-28 | Release date: | 2008-11-25 | Last modified: | 2017-10-25 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structural synergy and molecular crosstalk between bacterial helicase loaders and replication initiators. Cell(Cambridge,Mass.), 135, 2008
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1SUU
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3TO1
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![BU of 3to1 by Molmil](/molmil-images/mine/3to1) | Two surfaces on Rtt106 mediate histone binding and chaperone activity | Descriptor: | Histone chaperone RTT106 | Authors: | Zunder, R.M, Antczak, A.J, Berger, J.M, Rine, J. | Deposit date: | 2011-09-02 | Release date: | 2011-12-21 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Two surfaces on the histone chaperone Rtt106 mediate histone binding, replication, and silencing. Proc.Natl.Acad.Sci.USA, 109, 2012
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1BJT
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![BU of 1bjt by Molmil](/molmil-images/mine/1bjt) | TOPOISOMERASE II RESIDUES 409-1201 | Descriptor: | TOPOISOMERASE II | Authors: | Fass, D, Bogden, C.E, Berger, J.M. | Deposit date: | 1998-06-29 | Release date: | 1999-05-04 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Quaternary changes in topoisomerase II may direct orthogonal movement of two DNA strands. Nat.Struct.Biol., 6, 1999
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3UC1
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![BU of 3uc1 by Molmil](/molmil-images/mine/3uc1) | Mycobacterium tuberculosis gyrase type IIA topoisomerase C-terminal domain | Descriptor: | ACETATE ION, CALCIUM ION, DNA gyrase subunit A, ... | Authors: | Tretter, E.M, Berger, J.M. | Deposit date: | 2011-10-25 | Release date: | 2012-03-28 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Mechanisms for Defining Supercoiling Set Point of DNA Gyrase Orthologs: II. THE SHAPE OF THE GyrA SUBUNIT C-TERMINAL DOMAIN (CTD) IS NOT A SOLE DETERMINANT FOR CONTROLLING SUPERCOILING EFFICIENCY. J.Biol.Chem., 287, 2012
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437D
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![BU of 437d by Molmil](/molmil-images/mine/437d) | CRYSTAL STRUCTURE OF AN RNA PSEUDOKNOT FROM BEET WESTERN YELLOW VIRUS INVOLVED IN RIBOSOMAL FRAMESHIFTING | Descriptor: | MAGNESIUM ION, RNA PSEUDOKNOT, SODIUM ION | Authors: | Su, L, Chen, L, Egli, M, Berger, J.M, Rich, A. | Deposit date: | 1998-11-24 | Release date: | 1998-12-03 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot. Nat.Struct.Biol., 6, 1999
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3HVD
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![BU of 3hvd by Molmil](/molmil-images/mine/3hvd) | The Protective Antigen Component of Anthrax Toxin Forms Functional Octameric Complexes | Descriptor: | CALCIUM ION, Protective antigen | Authors: | Kintzer, A.F, Dong, K.C, Berger, J.M, Krantz, B.A. | Deposit date: | 2009-06-15 | Release date: | 2009-08-25 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (3.209 Å) | Cite: | The protective antigen component of anthrax toxin forms functional octameric complexes. J.Mol.Biol., 392, 2009
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3ICE
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![BU of 3ice by Molmil](/molmil-images/mine/3ice) | Rho transcription termination factor bound to RNA and ADP-BeF3 | Descriptor: | 5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3', ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ... | Authors: | Thomsen, N.D, Berger, J.M. | Deposit date: | 2009-07-17 | Release date: | 2009-11-10 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Running in reverse: the structural basis for translocation polarity in hexameric helicases. Cell(Cambridge,Mass.), 139, 2009
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3IBP
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![BU of 3ibp by Molmil](/molmil-images/mine/3ibp) | The Crystal Structure of the Dimerization Domain of Escherichia coli Structural Maintenance of Chromosomes Protein MukB | Descriptor: | AMMONIUM ION, Chromosome partition protein mukB | Authors: | Li, Y, Schoeffler, A.J, Berger, J.M, Oakley, M.G. | Deposit date: | 2009-07-16 | Release date: | 2010-01-26 | Last modified: | 2017-11-01 | Method: | X-RAY DIFFRACTION (3.099 Å) | Cite: | The crystal structure of the hinge domain of the Escherichia coli structural maintenance of chromosomes protein MukB. J.Mol.Biol., 395, 2010
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3ILW
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![BU of 3ilw by Molmil](/molmil-images/mine/3ilw) | Structure of DNA gyrase subunit A N-terminal domain | Descriptor: | DNA gyrase subunit A, GLYCEROL | Authors: | Tretter, E.M, Schoeffler, A.J, Weisfield, S.R, Berger, J.M, TB Structural Genomics Consortium (TBSGC) | Deposit date: | 2009-08-07 | Release date: | 2009-10-06 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (1.603 Å) | Cite: | Crystal structure of the DNA gyrase GyrA N-terminal domain from Mycobacterium tuberculosis. Proteins, 78, 2010
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3K60
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1Z5C
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![BU of 1z5c by Molmil](/molmil-images/mine/1z5c) | Topoisomerase VI-B, ADP Pi bound dimer form | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ... | Authors: | Corbett, K.D, Berger, J.M. | Deposit date: | 2005-03-17 | Release date: | 2005-06-14 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structural dissection of ATP turnover in the prototypical GHL ATPase TopoVI. Structure, 13, 2005
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2Q2E
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2QBY
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![BU of 2qby by Molmil](/molmil-images/mine/2qby) | Crystal structure of a heterodimer of Cdc6/Orc1 initiators bound to origin DNA (from S. solfataricus) | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 6 homolog 1, Cell division control protein 6 homolog 3, ... | Authors: | Cunningham Dueber, E.L, Corn, J.E, Bell, S.D, Berger, J.M. | Deposit date: | 2007-06-18 | Release date: | 2007-09-11 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (3.35 Å) | Cite: | Replication origin recognition and deformation by a heterodimeric archaeal Orc1 complex. Science, 317, 2007
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1ZVU
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1ZVT
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2RGR
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![BU of 2rgr by Molmil](/molmil-images/mine/2rgr) | Topoisomerase IIA bound to G-segment DNA | Descriptor: | DNA, DNA topoisomerase 2, MAGNESIUM ION | Authors: | Dong, K.C, Berger, J.M. | Deposit date: | 2007-10-04 | Release date: | 2007-12-25 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Structural basis for gate-DNA recognition and bending by type IIA topoisomerases. Nature, 450, 2007
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1ZUN
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![BU of 1zun by Molmil](/molmil-images/mine/1zun) | Crystal Structure of a GTP-Regulated ATP Sulfurylase Heterodimer from Pseudomonas syringae | Descriptor: | GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... | Authors: | Mougous, J.D, Lee, D.H, Hubbard, S.C, Schelle, M.W, Vocadlo, D.J, Berger, J.M, Bertozzi, C.R. | Deposit date: | 2005-05-31 | Release date: | 2006-01-17 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Molecular basis for g protein control of the prokaryotic ATP sulfurylase. Mol.Cell, 21, 2006
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2AU3
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![BU of 2au3 by Molmil](/molmil-images/mine/2au3) | Crystal Structure of the Aquifex aeolicus primase (Zinc Binding and RNA Polymerase Domains) | Descriptor: | DNA primase, ZINC ION | Authors: | Corn, J.E, Pease, P.J, Hura, G.L, Berger, J.M. | Deposit date: | 2005-08-26 | Release date: | 2005-11-15 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crosstalk between primase subunits can act to regulate primer synthesis in trans. Mol.Cell, 20, 2005
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1Z5A
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![BU of 1z5a by Molmil](/molmil-images/mine/1z5a) | Topoisomerase VI-B, ADP-bound dimer form | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Type II DNA topoisomerase VI subunit B | Authors: | Corbett, K.D, Berger, J.M. | Deposit date: | 2005-03-17 | Release date: | 2005-06-14 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structural dissection of ATP turnover in the prototypical GHL ATPase TopoVI. Structure, 13, 2005
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