Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 171 件
1FNN
DownloadVisualize
BU of 1fnn by Molmil
CRYSTAL STRUCTURE OF CDC6P FROM PYROBACULUM AEROPHILUM
分子名称: ADENOSINE-5'-DIPHOSPHATE, CELL DIVISION CONTROL PROTEIN 6, MAGNESIUM ION
著者Liu, J, Smith, C.L, DeRyckere, D, DeAngelis, K, Martin, G.S, Berger, J.M.
登録日2000-08-22
公開日2000-10-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and function of Cdc6/Cdc18: implications for origin recognition and checkpoint control.
Mol.Cell, 6, 2000
1JHN
DownloadVisualize
BU of 1jhn by Molmil
Crystal Structure of the Lumenal Domain of Calnexin
分子名称: CALCIUM ION, calnexin
著者Schrag, J.D, Bergeron, J.M, Li, Y, Borisova, S, Hahn, M, Thomas, D.Y, Cygler, M.
登録日2001-06-28
公開日2001-10-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The Structure of calnexin, an ER chaperone involved in quality control of protein folding.
Mol.Cell, 8, 2001
4FM9
DownloadVisualize
BU of 4fm9 by Molmil
Human topoisomerase II alpha bound to DNA
分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*AP*TP*CP*GP*TP*CP*AP*TP*CP*CP*TP*C)-3'), DNA (5'-D(P*GP*AP*GP*GP*AP*TP*GP*AP*CP*GP*AP*TP*G)-3'), DNA topoisomerase 2-alpha, ...
著者Wendorff, T.J, Schmidt, B.H, Heslop, P, Austin, C.A, Berger, J.M.
登録日2012-06-15
公開日2012-08-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.901 Å)
主引用文献The Structure of DNA-Bound Human Topoisomerase II Alpha: Conformational Mechanisms for Coordinating Inter-Subunit Interactions with DNA Cleavage.
J.Mol.Biol., 424, 2012
4GFH
DownloadVisualize
BU of 4gfh by Molmil
Topoisomerase II-DNA-AMPPNP complex
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*CP*GP*TP*CP*AP*TP*CP*C)-3'), DNA (5'-D(*CP*GP*CP*GP*GP*TP*AP*GP*CP*AP*GP*TP*AP*GP*G)-3'), DNA (5'-D(P*CP*CP*TP*AP*CP*TP*GP*CP*TP*AP*C)-3'), ...
著者Schmidt, B.H, Osheroff, N, Berger, J.M.
登録日2012-08-03
公開日2012-10-03
最終更新日2019-07-31
実験手法X-RAY DIFFRACTION (4.408 Å)
主引用文献Structure of a topoisomerase II-DNA-nucleotide complex reveals a new control mechanism for ATPase activity.
Nat.Struct.Mol.Biol., 19, 2012
4KM5
DownloadVisualize
BU of 4km5 by Molmil
X-ray crystal structure of human cyclic GMP-AMP synthase (cGAS)
分子名称: Cyclic GMP-AMP synthase, ZINC ION
著者Kranzusch, P.J, Lee, A.S.Y, Berger, J.M, Doudna, J.A.
登録日2013-05-08
公開日2013-05-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Structure of Human cGAS Reveals a Conserved Family of Second-Messenger Enzymes in Innate Immunity.
Cell Rep, 3, 2013
4MN4
DownloadVisualize
BU of 4mn4 by Molmil
Structural Basis for the MukB-topoisomerase IV Interaction
分子名称: Chromosome partition protein MukB, DNA topoisomerase 4 subunit A
著者Vos, S.M, Stewart, N.K, Oakley, M.G, Berger, J.M.
登録日2013-09-09
公開日2013-10-23
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for the MukB-topoisomerase IV interaction and its functional implications in vivo.
Embo J., 32, 2013
3KML
DownloadVisualize
BU of 3kml by Molmil
Circular Permutant of the Tobacco Mosaic Virus
分子名称: Coat protein
著者Duderstadt, K.E, Dedeo, M.T, Francis, M.B, Berger, J.M.
登録日2009-11-10
公開日2010-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.011 Å)
主引用文献Nanoscale protein assemblies from a circular permutant of the tobacco mosaic virus.
Nano Lett., 10, 2010
3L4J
DownloadVisualize
BU of 3l4j by Molmil
Topoisomerase II-DNA cleavage complex, apo
分子名称: 3'-THIO-THYMIDINE-5'-PHOSPHATE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*CP*GP*TP*CP*AP*TP*CP*C)-3'), DNA (5'-D(*CP*GP*CP*GP*GP*TP*AP*GP*CP*AP*GP*TP*AP*GP*G)-3'), ...
著者Schmidt, B.H, Burgin, A.B, Deweese, J.E, Osheroff, N, Berger, J.M.
登録日2009-12-20
公開日2010-05-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献A novel and unified two-metal mechanism for DNA cleavage by type II and IA topoisomerases.
Nature, 465, 2010
3NO0
DownloadVisualize
BU of 3no0 by Molmil
Aquifex aeolicus type IIA topoisomerase C-terminal domain
分子名称: DNA gyrase subunit A, GLYCEROL, NITRATE ION
著者Tretter, E.M, Lerman, J.C, Berger, J.M.
登録日2010-06-24
公開日2010-12-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.3004 Å)
主引用文献A naturally chimeric type IIA topoisomerase in Aquifex aeolicus highlights an evolutionary path for the emergence of functional paralogs.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KDE
DownloadVisualize
BU of 3kde by Molmil
Crystal structure of the THAP domain from D. melanogaster P-element transposase in complex with its natural DNA binding site
分子名称: 5'-D(*(BRU)P*CP*CP*AP*CP*TP*TP*AP*AP*C)-3', 5'-D(*GP*TP*TP*AP*AP*GP*(BRU)P*GP*GP*A)-3', Transposable element P transposase, ...
著者Sabogal, A, Lyubimov, A.Y, Berger, J.M, Rio, D.C.
登録日2009-10-22
公開日2009-12-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献THAP proteins target specific DNA sites through bipartite recognition of adjacent major and minor grooves.
Nat.Struct.Mol.Biol., 17, 2010
3NUH
DownloadVisualize
BU of 3nuh by Molmil
A domain insertion in E. coli GyrB adopts a novel fold that plays a critical role in gyrase function
分子名称: DNA gyrase subunit A, DNA gyrase subunit B, MAGNESIUM ION
著者Schoeffler, A.J, May, A.P, Berger, J.M.
登録日2010-07-06
公開日2010-08-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.103 Å)
主引用文献A domain insertion in Escherichia coli GyrB adopts a novel fold that plays a critical role in gyrase function.
Nucleic Acids Res., 38, 2010
3L4K
DownloadVisualize
BU of 3l4k by Molmil
Topoisomerase II-DNA cleavage complex, metal-bound
分子名称: 3'-THIO-THYMIDINE-5'-PHOSPHATE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*CP*GP*TP*CP*AP*TP*CP*C)-3'), DNA (5'-D(*CP*GP*CP*GP*GP*TP*AP*GP*CP*AP*GP*TP*AP*GP*G)-3'), ...
著者Schmidt, B.H, Burgin, A.B, Deweese, J.E, Osheroff, N, Berger, J.M.
登録日2009-12-20
公開日2010-05-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献A novel and unified two-metal mechanism for DNA cleavage by type II and IA topoisomerases.
Nature, 465, 2010
4FTH
DownloadVisualize
BU of 4fth by Molmil
Crystal Structure of NtrC4 DNA-binding domain bound to double-stranded DNA
分子名称: 5'-D(*AP*CP*TP*TP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*AP*AP*AP*TP*GP*CP*AP*T)-3', 5'-D(P*GP*AP*TP*GP*CP*AP*TP*TP*TP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*AP*A)-3', Transcriptional regulator (NtrC family)
著者Vidangos, N.K, Heideker, J, Lyubimov, A.Y, Lamers, M, Huo, Y, Pelton, J.G, Ton, J, Gralla, J.D, Kuriyan, J, Berger, J.M, Wemmer, D.E.
登録日2012-06-27
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.004 Å)
主引用文献DNA Recognition by a sigma (54) Transcriptional Activator from Aquifex aeolicus.
J.Mol.Biol., 426, 2014
3PEU
DownloadVisualize
BU of 3peu by Molmil
S. cerevisiae Dbp5 L327V C-terminal domain bound to Gle1 H337R and IP6
分子名称: ATP-dependent RNA helicase DBP5, GLYCEROL, INOSITOL HEXAKISPHOSPHATE, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2010-10-27
公開日2011-03-23
最終更新日2020-10-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Nature, 472, 2011
3PEW
DownloadVisualize
BU of 3pew by Molmil
S. cerevisiae Dbp5 L327V bound to RNA and ADP BeF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, BERYLLIUM TRIFLUORIDE ION, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2010-10-27
公開日2011-03-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Nature, 472, 2011
3PEV
DownloadVisualize
BU of 3pev by Molmil
S. cerevisiae Dbp5 L327V C-terminal domain bound to Gle1 and IP6
分子名称: ATP-dependent RNA helicase DBP5, GLYCEROL, INOSITOL HEXAKISPHOSPHATE, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2010-10-27
公開日2011-03-23
最終更新日2020-10-14
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Nature, 472, 2011
3PEY
DownloadVisualize
BU of 3pey by Molmil
S. cerevisiae Dbp5 bound to RNA and ADP BeF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, BERYLLIUM TRIFLUORIDE ION, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2010-10-27
公開日2011-03-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP(6) in mRNA export.
Nature, 472, 2011
3RRN
DownloadVisualize
BU of 3rrn by Molmil
S. cerevisiae dbp5 l327v bound to gle1 h337r and ip6
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, INOSITOL HEXAKISPHOSPHATE, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2011-04-29
公開日2011-05-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (4.001 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP6 in mRNA export.
Nature, 472, 2011
3RRM
DownloadVisualize
BU of 3rrm by Molmil
S. cerevisiae dbp5 l327v bound to nup159, gle1 h337r, ip6 and adp
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DBP5, INOSITOL HEXAKISPHOSPHATE, ...
著者Montpetit, B, Thomsen, N.D, Helmke, K.J, Seeliger, M.A, Berger, J.M, Weis, K.
登録日2011-04-29
公開日2011-05-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP6 in mRNA export.
Nature, 472, 2011
3R8F
DownloadVisualize
BU of 3r8f by Molmil
Replication initiator DnaA bound to AMPPCP and single-stranded DNA
分子名称: 5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3', Chromosomal replication initiator protein dnaA, MAGNESIUM ION, ...
著者Duderstadt, K.E, Chuang, K, Berger, J.M.
登録日2011-03-23
公開日2011-09-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.366 Å)
主引用文献DNA stretching by bacterial initiators promotes replication origin opening.
Nature, 478, 2011
4LIM
DownloadVisualize
BU of 4lim by Molmil
Crystal structure of the catalytic subunit of yeast primase
分子名称: DNA primase small subunit, ZINC ION
著者Vaithiyalingam, S, Chazin, W.J, Berger, J.M, Corn, J, Stephenson, S.
登録日2013-07-02
公開日2013-12-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Insights into Eukaryotic Primer Synthesis from Structures of the p48 Subunit of Human DNA Primase.
J.Mol.Biol., 426, 2014

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon