Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 388 results

4JZB
DownloadVisualize
BU of 4jzb by Molmil
Crystal Structure of Leshmaniasis major Farnesyl diphosphate synthase in complex with 1-(2-HYDROXY-2,2-DIPHOSPHONOETHYL)-3-PHENYLPYRIDINIUM, IPP and Ca2+
Descriptor: 1-(2-hydroxy-2,2-diphosphonoethyl)-3-phenylpyridinium, 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, CALCIUM ION, ...
Authors:Aripirala, S, Amzel, L.M, Gabelli, S.
Deposit date:2013-04-02
Release date:2014-02-12
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and thermodynamic basis of the inhibition of Leishmania major farnesyl diphosphate synthase by nitrogen-containing bisphosphonates.
Acta Crystallogr.,Sect.D, 70, 2014
4HFQ
DownloadVisualize
BU of 4hfq by Molmil
Crystal structure of UDP-X diphosphatase
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Duong-Ly, K.C, Amzel, L.M, Gabelli, S.B.
Deposit date:2012-10-05
Release date:2013-08-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:A UDP-X diphosphatase from Streptococcus pneumoniae hydrolyzes precursors of peptidoglycan biosynthesis.
Plos One, 8, 2013
5TJ7
DownloadVisualize
BU of 5tj7 by Molmil
Structure of WWP2 WW2-2,3-linker-HECT aa 334-398 linked to 485-865
Descriptor: CHLORIDE ION, NEDD4-like E3 ubiquitin-protein ligase WWP2, SODIUM ION, ...
Authors:Chen, Z, Gabelli, S.B.
Deposit date:2016-10-03
Release date:2017-05-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Tunable Brake for HECT Ubiquitin Ligases.
Mol. Cell, 66, 2017
3FFU
DownloadVisualize
BU of 3ffu by Molmil
Structure of the RNA pyrophosphohydrolase BdRppH in complex with GTP and magnesium
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Probable pyrophosphohydrolase
Authors:Messing, S.A, Gabelli, S.B, Amzel, L.M.
Deposit date:2008-12-04
Release date:2009-03-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and Biological Function of the RNA Pyrophosphohydrolase BdRppH from Bdellovibrio bacteriovorus.
Structure, 17, 2009
3CCN
DownloadVisualize
BU of 3ccn by Molmil
X-ray structure of c-Met with triazolopyridazine inhibitor.
Descriptor: 4-[(6-phenyl[1,2,4]triazolo[4,3-b]pyridazin-3-yl)methyl]phenol, Hepatocyte growth factor receptor
Authors:Abrecht, B.K, Harmange, J.-C, Bauer, D, Dussault, I, long, A, Bellon, S.F.
Deposit date:2008-02-26
Release date:2008-04-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery and Optimization of Triazolopyridazines as Potent and Selective Inhibitors of the c-Met Kinase.
J.Med.Chem., 51, 2008
2LQR
DownloadVisualize
BU of 2lqr by Molmil
NMR structure of Ig3 domain of palladin
Descriptor: Palladin
Authors:Beck, M.R, Dixon IV, R.D.S, Otey, C.A, Campbell, S.L, Murphy, G.S.
Deposit date:2012-03-13
Release date:2013-01-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure and Function of Palladin's Actin Binding Domain.
J.Mol.Biol., 425, 2013
4YYG
DownloadVisualize
BU of 4yyg by Molmil
Crystal structure of BRD9 Bromodomain bound to a butyryllysine peptide
Descriptor: Bromodomain-containing protein 9, Histone H4
Authors:Tang, Y, Bellon, S, Cochran, A.G, Poy, F.
Deposit date:2015-03-23
Release date:2015-09-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Subset of Human Bromodomains Recognizes Butyryllysine and Crotonyllysine Histone Peptide Modifications.
Structure, 23, 2015
4YYJ
DownloadVisualize
BU of 4yyj by Molmil
Crystal structure of BRD9 Bromodomain bound to a butyryllysine peptide
Descriptor: Bromodomain-containing protein 9, Histone H4
Authors:Tang, Y, Bellon, S, Cochran, A.G, Poy, F.
Deposit date:2015-03-23
Release date:2015-09-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A Subset of Human Bromodomains Recognizes Butyryllysine and Crotonyllysine Histone Peptide Modifications.
Structure, 23, 2015
4YY6
DownloadVisualize
BU of 4yy6 by Molmil
Crystal structure of BRD9 Bromodomain bound to a butyryllysine peptide
Descriptor: Bromodomain-containing protein 9, Histone H4
Authors:Tang, Y, Bellon, S, Cochran, A.G, Poy, F.
Deposit date:2015-03-23
Release date:2015-09-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A Subset of Human Bromodomains Recognizes Butyryllysine and Crotonyllysine Histone Peptide Modifications.
Structure, 23, 2015
4YYD
DownloadVisualize
BU of 4yyd by Molmil
Crystal structure of BRD9 Bromodomain bound to a crotonyllysine peptide
Descriptor: Bromodomain-containing protein 9, Histone H4
Authors:Tang, Y, Bellon, S, Cochran, A.G, Poy, F.
Deposit date:2015-03-23
Release date:2015-09-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:A Subset of Human Bromodomains Recognizes Butyryllysine and Crotonyllysine Histone Peptide Modifications.
Structure, 23, 2015
4YYH
DownloadVisualize
BU of 4yyh by Molmil
Crystal structure of BRD9 Bromodomain bound to a crotonyllysine peptide
Descriptor: Bromodomain-containing protein 9, Histone H4
Authors:Tang, Y, Bellon, S, Cochran, A.G, Poy, F.
Deposit date:2015-03-23
Release date:2015-09-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:A Subset of Human Bromodomains Recognizes Butyryllysine and Crotonyllysine Histone Peptide Modifications.
Structure, 23, 2015
4YYN
DownloadVisualize
BU of 4yyn by Molmil
Crystal structure of TAF1 BD2 Bromodomain bound to a crotonyllysine peptide
Descriptor: Histone H4, Transcription initiation factor TFIID subunit 1
Authors:Tang, Y, Bellon, S, Cochran, A.G, Poy, F.
Deposit date:2015-03-24
Release date:2015-09-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A Subset of Human Bromodomains Recognizes Butyryllysine and Crotonyllysine Histone Peptide Modifications.
Structure, 23, 2015
4YYK
DownloadVisualize
BU of 4yyk by Molmil
Crystal structure of BRD9 Bromodomain bound to a crotonyllysine peptide
Descriptor: Bromodomain-containing protein 9, Histone H4
Authors:Tang, Y, Bellon, S, Cochran, A.G, Poy, F.
Deposit date:2015-03-24
Release date:2015-09-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:A Subset of Human Bromodomains Recognizes Butyryllysine and Crotonyllysine Histone Peptide Modifications.
Structure, 23, 2015
4YYM
DownloadVisualize
BU of 4yym by Molmil
Crystal structure of TAF1 BD2 Bromodomain bound to a butyryllysine peptide
Descriptor: CALCIUM ION, Histone H4, Transcription initiation factor TFIID subunit 1
Authors:Tang, Y, Bellon, S, Cochran, A.G, Poy, F.
Deposit date:2015-03-24
Release date:2015-09-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A Subset of Human Bromodomains Recognizes Butyryllysine and Crotonyllysine Histone Peptide Modifications.
Structure, 23, 2015
4YYI
DownloadVisualize
BU of 4yyi by Molmil
Crystal structure of BRD9 Bromodomain bound to an acetylated peptide
Descriptor: Bromodomain-containing protein 9, Histone H4
Authors:Tang, Y, Bellon, S, Cochran, A.G, Poy, F.
Deposit date:2015-03-23
Release date:2015-09-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A Subset of Human Bromodomains Recognizes Butyryllysine and Crotonyllysine Histone Peptide Modifications.
Structure, 23, 2015
1FAQ
DownloadVisualize
BU of 1faq by Molmil
RAF-1 CYSTEINE RICH DOMAIN, NMR, 27 STRUCTURES
Descriptor: RAF-1, ZINC ION
Authors:Mott, H.R, Campbell, S.L.
Deposit date:1996-09-05
Release date:1997-01-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of the Raf-1 cysteine-rich domain: a novel ras and phospholipid binding site.
Proc.Natl.Acad.Sci.USA, 93, 1996
1FAR
DownloadVisualize
BU of 1far by Molmil
RAF-1 CYSTEINE RICH DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: RAF-1, ZINC ION
Authors:Mott, H.R, Campbell, S.L.
Deposit date:1996-09-05
Release date:1997-01-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of the Raf-1 cysteine-rich domain: a novel ras and phospholipid binding site.
Proc.Natl.Acad.Sci.USA, 93, 1996
5TJ8
DownloadVisualize
BU of 5tj8 by Molmil
Structure of WWP2 WW2-2,3-linker-HECT (no WW2 observed)
Descriptor: NEDD4-like E3 ubiquitin-protein ligase WWP2,NEDD4-like E3 ubiquitin-protein ligase WWP2, SODIUM ION
Authors:Chen, Z, Gabelli, S.B.
Deposit date:2016-10-03
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Tunable Brake for HECT Ubiquitin Ligases.
Mol. Cell, 66, 2017
5TJQ
DownloadVisualize
BU of 5tjq by Molmil
Structure of WWP2 2,3-linker-HECT
Descriptor: NEDD4-like E3 ubiquitin-protein ligase WWP2,NEDD4-like E3 ubiquitin-protein ligase WWP2
Authors:Chen, Z, Gabelli, S.B.
Deposit date:2016-10-04
Release date:2017-05-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A Tunable Brake for HECT Ubiquitin Ligases.
Mol. Cell, 66, 2017
2C56
DownloadVisualize
BU of 2c56 by Molmil
A comparative study of uracil DNA glycosylases from human and herpes simplex virus type 1
Descriptor: URACIL DNA GLYCOSYLASE, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Krusong, K, Carpenter, E.P, Bellamy, S.R.W, Savva, R, Baldwin, G.S.
Deposit date:2005-10-26
Release date:2005-11-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Comparative Study of Uracil-DNA Glycosylases from Human and Herpes Simplex Virus Type 1.
J.Biol.Chem., 281, 2006
2C53
DownloadVisualize
BU of 2c53 by Molmil
A comparative study of uracil DNA glycosylases from human and herpes simplex virus type 1
Descriptor: 2'-DEOXYURIDINE, GLYCEROL, URACIL DNA GLYCOSYLASE
Authors:Krusong, K, Carpenter, E.P, Bellmy, S.R.W, Savva, R, Baldwin, G.S.
Deposit date:2005-10-25
Release date:2005-11-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Comparative Study of Uracil-DNA Glycosylases from Human and Herpes Simplex Virus Type 1.
J.Biol.Chem., 281, 2006
3JBK
DownloadVisualize
BU of 3jbk by Molmil
Cryo-EM reconstruction of the metavinculin-actin interface
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Kim, L.Y, Thompson, P.M, Lee, H.T, Pershad, M, Campbell, S.L, Alushin, G.M.
Deposit date:2015-09-03
Release date:2015-11-04
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:The Structural Basis of Actin Organization by Vinculin and Metavinculin.
J.Mol.Biol., 428, 2016
3JBI
DownloadVisualize
BU of 3jbi by Molmil
MDFF model of the vinculin tail domain bound to F-actin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Kim, L.Y, Thompson, P.M, Lee, H.T, Pershad, M, Campbell, S.L, Alushin, G.M.
Deposit date:2015-09-02
Release date:2015-11-04
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (8.5 Å)
Cite:The Structural Basis of Actin Organization by Vinculin and Metavinculin.
J.Mol.Biol., 428, 2016
2NQ4
DownloadVisualize
BU of 2nq4 by Molmil
Solution Structures of a DNA Dodecamer Duplex
Descriptor: 5'-D(*CP*CP*TP*CP*AP*GP*GP*CP*CP*TP*CP*C)-3', 5'-D(*GP*GP*AP*GP*GP*CP*CP*TP*GP*AP*GP*G)-3'
Authors:Bhattacharyya, D, Wu, Y, Chaney, S, Campbell, S.
Deposit date:2006-10-30
Release date:2007-06-12
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structures of a DNA Dodecamer Duplex with and without a Cisplatin 1,2-d(GG) Intrastrand Cross-Link: Comparison with the Same DNA Duplex Containing an Oxaliplatin 1,2-d(GG) Intrastrand Cross-Link
Biochemistry, 46, 2007
2NQ0
DownloadVisualize
BU of 2nq0 by Molmil
Solution Structures of a DNA Dodecamer Duplex with a Cisplatin 1,2-d(GG) Intrastrand Cross-Link
Descriptor: 5'-D(*CP*CP*TP*CP*AP*GP*GP*CP*CP*TP*CP*C)-3', 5'-D(*GP*GP*AP*GP*GP*CP*CP*TP*GP*AP*GP*G)-3', Cisplatin
Authors:Wu, Y, Bhattacharyya, D, Chaney, S, Campbell, S.
Deposit date:2006-10-30
Release date:2007-06-12
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structures of a DNA Dodecamer Duplex with and without a Cisplatin 1,2-d(GG) Intrastrand Cross-Link: Comparison with the Same DNA Duplex Containing an Oxaliplatin 1,2-d(GG) Intrastrand Cross-Link
Biochemistry, 46, 2007

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon