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PDB: 272 件

7ZPQ
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Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Best, K.M, Ikeuchi, K, Kater, L, Best, D.M, Musial, J, Matsuo, Y, Berninghausen, O, Becker, T, Inada, T, Beckmann, R.
登録日2022-04-28
公開日2023-02-22
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structural basis for clearing of ribosome collisions by the RQT complex.
Nat Commun, 14, 2023
7ZRS
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Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Best, K.M, Ikeuchi, K, Kater, L, Best, D.M, Musial, J, Matsuo, Y, Berninghausen, O, Becker, T, Inada, T, Beckmann, R.
登録日2022-05-05
公開日2023-02-22
最終更新日2023-03-01
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structural basis for clearing of ribosome collisions by the RQT complex.
Nat Commun, 14, 2023
7ZUX
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Collided ribosome in a disome unit from S. cerevisiae
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Best, K.M, Ikeuchi, K, Kater, L, Best, D.M, Musial, J, Matsuo, Y, Berninghausen, O, Becker, T, Inada, T, Beckmann, R.
登録日2022-05-13
公開日2023-02-22
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structural basis for clearing of ribosome collisions by the RQT complex.
Nat Commun, 14, 2023
7ZUW
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Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Best, K.M, Ikeuchi, K, Kater, L, Best, D.M, Musial, J, Matsuo, Y, Berninghausen, O, Becker, T, Inada, T, Beckmann, R.
登録日2022-05-13
公開日2023-02-22
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural basis for clearing of ribosome collisions by the RQT complex.
Nat Commun, 14, 2023
4V6X
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Structure of the human 80S ribosome
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Anger, A.M, Armache, J.-P, Berninghausen, O, Habeck, M, Subklewe, M, Wilson, D.N, Beckmann, R.
登録日2013-02-27
公開日2014-07-09
最終更新日2023-02-01
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Structures of the human and Drosophila 80S ribosome.
Nature, 497, 2013
2IX8
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BU of 2ix8 by Molmil
MODEL FOR EEF3 BOUND TO AN 80S RIBOSOME
分子名称: ELONGATION FACTOR 3A
著者Andersen, C.B.F, Becker, T, Blau, M, Anand, M, Halic, M, Balar, B, Mielke, T, Boesen, T, Pedersen, J.S, Spahn, C.M.T, Kinzy, T.G, Andersen, G.R, Beckmann, R.
登録日2006-07-07
公開日2007-07-10
最終更新日2017-08-23
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献Structure of Eef3 and the Mechanism of Transfer RNA Release from the E-Site.
Nature, 443, 2006
4V6U
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Promiscuous behavior of proteins in archaeal ribosomes revealed by cryo-EM: implications for evolution of eukaryotic ribosomes
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10P, ...
著者Armache, J.-P, Anger, A.M, Marquez, V, Frankenberg, S, Froehlich, T, Villa, E, Berninghausen, O, Thomm, M, Arnold, G.J, Beckmann, R, Wilson, D.N.
登録日2012-08-09
公開日2014-07-09
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (6.6 Å)
主引用文献Promiscuous behaviour of archaeal ribosomal proteins: Implications for eukaryotic ribosome evolution.
Nucleic Acids Res., 41, 2013
7OI9
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Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3B
分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
著者Cheng, J, Berninghausen, O, Beckmann, R.
登録日2021-05-11
公開日2021-09-15
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献A distinct assembly pathway of the human 39S late pre-mitoribosome.
Nat Commun, 12, 2021
7OIA
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Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3C
分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
著者Cheng, J, Berninghausen, O, Beckmann, R.
登録日2021-05-11
公開日2021-09-15
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献A distinct assembly pathway of the human 39S late pre-mitoribosome.
Nat Commun, 12, 2021
7OI7
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Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2
分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
著者Cheng, J, Berninghausen, O, Beckmann, R.
登録日2021-05-11
公開日2021-09-15
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献A distinct assembly pathway of the human 39S late pre-mitoribosome.
Nat Commun, 12, 2021
7OIE
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Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5B
分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
著者Cheng, J, Berninghausen, O, Beckmann, R.
登録日2021-05-11
公開日2021-09-15
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献A distinct assembly pathway of the human 39S late pre-mitoribosome.
Nat Commun, 12, 2021
7OIC
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BU of 7oic by Molmil
Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4
分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
著者Cheng, J, Berninghausen, O, Beckmann, R.
登録日2021-05-11
公開日2021-09-15
最終更新日2021-10-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献A distinct assembly pathway of the human 39S late pre-mitoribosome.
Nat Commun, 12, 2021
7OIB
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BU of 7oib by Molmil
Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3D
分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
著者Cheng, J, Berninghausen, O, Beckmann, R.
登録日2021-05-11
公開日2021-09-15
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献A distinct assembly pathway of the human 39S late pre-mitoribosome.
Nat Commun, 12, 2021
7OI8
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BU of 7oi8 by Molmil
Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3A
分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
著者Cheng, J, Berninghausen, O, Beckmann, R.
登録日2021-05-11
公開日2021-09-15
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献A distinct assembly pathway of the human 39S late pre-mitoribosome.
Nat Commun, 12, 2021
7OID
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BU of 7oid by Molmil
Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5A
分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
著者Cheng, J, Berninghausen, O, Beckmann, R.
登録日2021-05-11
公開日2021-09-15
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献A distinct assembly pathway of the human 39S late pre-mitoribosome.
Nat Commun, 12, 2021
7OI6
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BU of 7oi6 by Molmil
Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 1
分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
著者Cheng, J, Berninghausen, O, Beckmann, R.
登録日2021-05-11
公開日2021-10-13
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (5.7 Å)
主引用文献A distinct assembly pathway of the human 39S late pre-mitoribosome.
Nat Commun, 12, 2021
7P3K
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BU of 7p3k by Molmil
Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Buschauer, R, Komar, T, Becker, T, Berninghausen, O, Cheng, J, Beckmann, R.
登録日2021-07-08
公開日2021-10-27
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of l-tryptophan-dependent inhibition of release factor 2 by the TnaC arrest peptide.
Nucleic Acids Res., 49, 2021
4URD
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BU of 4urd by Molmil
Cryo-EM map of Trigger Factor bound to a translating ribosome
分子名称: TRIGGER FACTOR
著者Deeng, J, Chan, K.Y, van der Sluis, E, Bischoff, L, Berninghausen, O, Han, W, Gumbart, J, Schulten, K, Beatrix, B, Beckmann, R.
登録日2014-06-27
公開日2016-01-13
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Dynamic Behavior of Trigger Factor on the Ribosome.
J.Mol.Biol., 428, 2016
4V5H
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E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.
分子名称: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
著者Seidelt, B, Innis, C.A, Wilson, D.N, Gartmann, M, Armache, J, Villa, E, Trabuco, L.G, Becker, T, Mielke, T, Schulten, K, Steitz, T.A, Beckmann, R.
登録日2009-10-26
公開日2014-07-09
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Structural insight into nascent polypeptide chain-mediated translational stalling.
Science, 326, 2009
4V7E
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BU of 4v7e by Molmil
Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome
分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S10E, ...
著者Barrio-Garcia, C, Armache, J.-P, Jarasch, A, Anger, A.M, Villa, E, Becker, T, Bhushan, S, Jossinet, F, Habeck, M, Dindar, G, Franckenberg, S, Marquez, V, Mielke, T, Thomm, M, Berninghausen, O, Beatrix, B, Soeding, J, Westhof, E, Wilson, D.N, Beckmann, R.
登録日2013-11-22
公開日2014-07-09
最終更新日2023-02-01
実験手法ELECTRON MICROSCOPY (5.5 Å)
主引用文献Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion.
Nature, 506, 2014
8CAS
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BU of 8cas by Molmil
Cryo-EM structure of native Otu2-bound ubiquitinated 48S initiation complex (partial)
分子名称: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
著者Ikeuchi, K, Buschauer, R, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
登録日2023-01-24
公開日2023-05-24
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Molecular basis for recognition and deubiquitination of 40S ribosomes by Otu2.
Nat Commun, 14, 2023
8CBJ
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BU of 8cbj by Molmil
Cryo-EM structure of Otu2-bound cytoplasmic pre-40S ribosome biogenesis complex
分子名称: 20S pre-ribosomal RNA, 20S-pre-rRNA D-site endonuclease NOB1, 40S ribosomal protein S0-A, ...
著者Ikeuchi, K, Buschauer, R, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
登録日2023-01-25
公開日2023-05-24
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Molecular basis for recognition and deubiquitination of 40S ribosomes by Otu2.
Nat Commun, 14, 2023
4V6W
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Structure of the D. melanogaster 80S ribosome
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 2S ribosomal RNA, ...
著者Anger, A.M, Armache, J.-P, Berninghausen, O, Habeck, M, Subklewe, M, Wilson, D.N, Beckmann, R.
登録日2013-02-27
公開日2014-07-09
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献Structures of the human and Drosophila 80S ribosome.
Nature, 497, 2013
6T83
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BU of 6t83 by Molmil
Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ...
著者Tesina, P, Buschauer, R, Cheng, J, Berninghausen, O, Becker, R, Beckmann, R.
登録日2019-10-24
公開日2019-12-25
最終更新日2020-02-12
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Molecular mechanism of translational stalling by inhibitory codon combinations and poly(A) tracts.
Embo J., 39, 2020
6T7I
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Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Tesina, P, Buschauer, R, Cheng, J, Berninghausen, O, Becker, R, Beckmann, R.
登録日2019-10-22
公開日2019-12-25
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Molecular mechanism of translational stalling by inhibitory codon combinations and poly(A) tracts.
Embo J., 39, 2020

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