Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

This is a large structure.

Summary for 4V7E

Related3J60 3J61 3J62
Integrates3J5Z 3J60 3J61 3J62
EMDB information1780
Descriptor18S ribosomal RNA, P-site tRNA, 5'-R(*AP*AP*AP*AP*GP*AP*CP*UP*UP*CP*A)-3', ... (86 entities in total)
Functional Keywordseukaryotic ribosome, homology modeling, de novo modeling, ribosomal rna, rrna, rna expansion segments, ribosome
Biological sourceTriticum aestivum (wheat)
Total number of polymer chains88
Total molecular weight3326877.74
Primary citation
Gogala, M.,Becker, T.,Beatrix, B.,Armache, J.P.,Barrio-Garcia, C.,Berninghausen, O.,Beckmann, R.
Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion.
Nature, 506:107-110, 2014
PubMed: 24499919 (PDB entries with the same primary citation)
DOI: 10.1038/nature12950
MImport into Mendeley
Experimental method

Structure validation

Ramachandran outliersSidechain outliersRNA backbone 8.1% 4.5% 0.46MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures
Download full validation reportDownload
PDB entries from 2020-10-28