4V7E

Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome

This is a non-PDB format compatible entry.

Replaces:  3IZ5Replaces:  3IZ6Replaces:  3IZ7Replaces:  3IZ9Replaces:  3IZR

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	Ad	18S ribosomal RNA	polymer	1810	583613.6	1	GenBank (AY049040.1)	Triticum aestivum (wheat)
2	Ae	P-site tRNA	polymer	75	24135.3	1	GenBank (M25599.1)	Triticum aestivum (wheat)
3	Af	5'-R(*AP*AP*AP*AP*GP*AP*CP*UP*UP*CP*A)-3'	polymer	11	3498.2	1		Triticum aestivum (wheat)
4	BY	40S ribosomal protein S24E	polymer	138	15788.7	1		Triticum aestivum (wheat)
5	BI	40S ribosomal protein S8E	polymer	220	24883.6	1		Triticum aestivum (wheat)
6	BK	40S ribosomal protein S10E	polymer	183	20292.8	1		Triticum aestivum (wheat)
7	BM	40S ribosomal protein S12E	polymer	171	18404.4	1		Triticum aestivum (wheat)
8	Bf	40S ribosomal protein S31e	polymer	155	17720.7	1		Triticum aestivum (wheat)
9	BX	40S ribosomal protein S12	polymer	142	15696.5	1		Triticum aestivum (wheat)
10	Bg	RACK1	polymer	380	41794.8	1	UniProt (Q8LNY6) Pfam (PF00400) In PDB	Triticum aestivum (wheat)
11	BD	40S ribosomal protein S3	polymer	208	23255.1	1	UniProt (Q8L804) Pfam (PF07650) Pfam (PF00189) In PDB	Triticum aestivum (wheat)
12	BE	40S ribosomal protein S4E	polymer	265	29922.0	1		Triticum aestivum (wheat)
13	BF	40S ribosomal protein S7	polymer	191	21249.5	1		Triticum aestivum (wheat)
14	BQ	40S ribosomal protein S9	polymer	149	16853.0	1		Triticum aestivum (wheat)
15	BU	40S ribosomal protein S10	polymer	128	14070.4	1		Triticum aestivum (wheat)
16	BO	40S ribosomal protein S11	polymer	151	16351.8	1		Triticum aestivum (wheat)
17	BS	40S ribosomal protein S13	polymer	152	17702.7	1	UniProt (Q8L806) Pfam (PF00416) In PDB	Triticum aestivum (wheat)
18	BN	40S ribosomal protein S15	polymer	151	17152.4	1		Triticum aestivum (wheat)
19	BL	40S ribosomal protein S17	polymer	160	18027.4	1		Triticum aestivum (wheat)
20	BT	40S ribosomal protein S19E	polymer	146	16414.8	1		Triticum aestivum (wheat)
21	BP	40S ribosomal protein S19	polymer	154	17449.5	1		Triticum aestivum (wheat)
22	BZ	40S ribosomal protein S25E	polymer	108	11944.9	1		Triticum aestivum (wheat)
23	Bc	40S ribosomal protein S28E	polymer	65	7477.8	1	UniProt (Q7X9K4) Pfam (PF01200) In PDB	Triticum aestivum (wheat)
24	BW	40S ribosomal protein S8	polymer	130	14825.4	1		Triticum aestivum (wheat)
25	Bd	40S ribosomal protein S14	polymer	56	6392.4	1	UniProt (Q5I7K3) Pfam (PF00253) In PDB	Triticum aestivum (wheat)
26	Bb	40S ribosomal protein S27E	polymer	86	9542.1	1		Triticum aestivum (wheat)
27	Be	40S ribosomal protein S30E	polymer	62	6953.3	1		Triticum aestivum (wheat)
28	BA	40S ribosomal protein S2	polymer	260	28723.6	1		Triticum aestivum (wheat)
29	BR	40S ribosomal protein S17E	polymer	141	16461.1	1		Triticum aestivum (wheat)
30	BB	40S ribosomal protein S1E	polymer	262	29781.7	1		Triticum aestivum (wheat)
31	BV	40S ribosomal protein S21E	polymer	82	9266.4	1		Triticum aestivum (wheat)
32	Ba	40S ribosomal protein S26E	polymer	133	15029.4	1		Triticum aestivum (wheat)
33	BJ	40S ribosomal protein S4	polymer	195	22629.2	1		Triticum aestivum (wheat)
34	BC	40S ribosomal protein S5	polymer	263	28859.6	1		Triticum aestivum (wheat)
35	BG	40S ribosomal protein S6	polymer	245	28107.0	1		Triticum aestivum (wheat)
36	BH	40S ribosomal protein S7E	polymer	189	21902.4	1	UniProt (Q5I7K2) Pfam (PF01251) In PDB	Triticum aestivum (wheat)
37	CG	60S ribosomal protein L8E	polymer	257	29236.9	1		Triticum aestivum (wheat)
38	CT	60S ribosomal protein L21E	polymer	164	18719.8	1	UniProt (F4YWL9) Pfam (PF01157) In PDB	Triticum aestivum (wheat)
39	CZ	60S ribosomal protein L27E	polymer	136	15508.6	1		Triticum aestivum (wheat)
40	Cz	60S ribosomal protein L1	polymer	216	24604.2	1	UniProt (Q5I7L3) Pfam (PF00687) In PDB	Triticum aestivum (wheat)
41	CA	60S ribosomal protein L2	polymer	261	28309.7	1		Triticum aestivum (wheat)
42	CJ	60S ribosomal protein L5	polymer	180	20727.1	1	UniProt (Q5I7L2) Pfam (PF00281) Pfam (PF00673) In PDB	Triticum aestivum (wheat)
43	CH	60S ribosomal protein L6	polymer	190	21382.8	1		Triticum aestivum (wheat)
44	CV	60S ribosomal protein L14	polymer	140	15040.9	1	UniProt (Q5I7K4) Pfam (PF00238) In PDB	Triticum aestivum (wheat)
45	CN	60S ribosomal protein L15E	polymer	200	23760.8	1		Triticum aestivum (wheat)
46	Ca	60S ribosomal protein L15	polymer	144	15834.8	1		Triticum aestivum (wheat)
47	CQ	60S ribosomal protein L18E	polymer	188	21379.3	1	UniProt (Q5I7L0) Pfam (PF17135) In PDB	Triticum aestivum (wheat)
48	CD	60S ribosomal protein L18	polymer	304	34723.2	1		Triticum aestivum (wheat)
49	CR	60S ribosomal protein L19E	polymer	209	24485.9	1	UniProt (Q7XY20) Pfam (PF01280) In PDB	Triticum aestivum (wheat)
50	CP	60S ribosomal protein L22	polymer	171	19536.5	1		Triticum aestivum (wheat)
51	CX	60S ribosomal protein L23	polymer	152	17091.4	1		Triticum aestivum (wheat)
52	CW	60S ribosomal protein L24E	polymer	162	18504.9	1		Triticum aestivum (wheat)
53	CY	60S ribosomal protein L24	polymer	150	16971.8	1		Triticum aestivum (wheat)
54	Cr	60S ribosomal protein L28E	polymer	147	16639.4	1		Triticum aestivum (wheat)
55	Cc	60S ribosomal protein L30E	polymer	112	12294.4	1	UniProt (Q5I7K9) Pfam (PF01248) In PDB	Triticum aestivum (wheat)
56	Cd	60S ribosomal protein L31E	polymer	123	14092.3	1		Triticum aestivum (wheat)
57	Ce	60S ribosomal protein L32E	polymer	133	15740.7	1		Triticum aestivum (wheat)
58	Cj	60S ribosomal protein L37E	polymer	94	10823.7	1		Triticum aestivum (wheat)
59	Cl	60S ribosomal protein L39E	polymer	51	6528.8	1	UniProt (Q5I7K7) Pfam (PF00832) In PDB	Triticum aestivum (wheat)
60	Co	60S ribosomal protein L44E	polymer	105	12174.4	1		Triticum aestivum (wheat)
61	CM	60S ribosomal protein L14E	polymer	134	15418.4	1		Triticum aestivum (wheat)
62	CS	60S ribosomal protein L20	polymer	178	21444.2	1		Triticum aestivum (wheat)
63	CU	60S ribosomal protein L22E	polymer	130	14443.6	1		Triticum aestivum (wheat)
64	Ci	60S ribosomal protein L36E	polymer	112	12563.0	1	UniProt (Q5I7L5) Pfam (PF01158) In PDB	Triticum aestivum (wheat)
65	CK	60S ribosomal protein L11	polymer	166	17775.7	1		Triticum aestivum (wheat)
66	Cu, Cv	60S ribosomal protein P1	polymer	110	11204.6	2	UniProt (Q5I7K5) Pfam (PF00428) In PDB	Triticum aestivum (wheat)
67	Cs, Ct	Acidic ribosomal protein P2	polymer	113	11597.0	2		Triticum aestivum (wheat)
68	Ch	60S ribosomal protein L29	polymer	124	14401.0	1	UniProt (Q8L805) Pfam (PF00831) In PDB	Triticum aestivum (wheat)
69	CF	60S ribosomal protein L30	polymer	244	28175.1	1	UniProt (Q5I7K6) Pfam (PF08079) Pfam (PF00327) In PDB	Triticum aestivum (wheat)
70	Cq	60S acidic ribosomal protein P0	polymer	319	34418.6	1		Triticum aestivum (wheat)
71	CB	60S ribosomal protein L3	polymer	389	44720.4	1	UniProt (Q7X744) Pfam (PF00297) In PDB	Triticum aestivum (wheat)
72	CC	60S ribosomal protein L4	polymer	405	44822.0	1		Triticum aestivum (wheat)
73	CO	60S ribosomal protein L13	polymer	206	23581.2	1	UniProt (Q5I7L1) Pfam (PF00572) In PDB	Triticum aestivum (wheat)
74	Cp	60S ribosomal protein L43E	polymer	92	10266.1	1	UniProt (D8L9P6) Pfam (PF01780) In PDB	Triticum aestivum (wheat)
75	CI	60S ribosomal protein L16	polymer	224	25400.8	1		Triticum aestivum (wheat)
76	Cn	60S ribosomal protein L41E	polymer	25	3445.4	1		Triticum aestivum (wheat)
77	Cm	60S ribosomal protein L40E	polymer	53	6295.6	1		Triticum aestivum (wheat)
78	CL	60S ribosomal protein L13E	polymer	208	24070.2	1		Triticum aestivum (wheat)
79	CE	60S ribosomal protein L6E	polymer	219	24589.8	1	UniProt (Q5I7L4) Pfam (PF01159) In PDB	Triticum aestivum (wheat)
80	Cf	60S ribosomal protein L33E	polymer	111	12684.7	1		Triticum aestivum (wheat)
81	Ck	60S ribosomal protein L38E	polymer	69	8053.6	1		Triticum aestivum (wheat)
82	Cb	60S ribosomal protein L29E	polymer	60	7069.0	1		Triticum aestivum (wheat)
83	Cg	60S ribosomal protein L34E	polymer	119	13808.4	1	UniProt (Q5I7K8) Pfam (PF01199) In PDB	Triticum aestivum (wheat)
84	Aa	60S ribosomal RNA	polymer	3391	1097289.3	1		Triticum aestivum (wheat)
85	Ac	5.8S ribosomal RNA	polymer	160	51535.6	1		Triticum aestivum (wheat)
86	Ab	5S ribosomal RNA	polymer	120	38717.0	1	GenBank (X06094.1)	Triticum aestivum (wheat)

Sequence modifications

Ad: 6 - 1810 (GenBank: AY049040.1)
Ad: 1 - 1810 (PDB: 4V7E)

Contents of the asymmetric unit

Polymers	Number of chains	88
	Total formula weight	3326877.7
All*	Total formula weight	3326877.7

*Water molecules are not included.