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PDB: 464 results

3ZV9
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BU of 3zv9 by Molmil
3C protease of Enterovirus 68 complexed with Michael receptor inhibitor 74
Descriptor: 3C PROTEASE, ETHYL (4R)-4-[(TERT-BUTOXYCARBONYL)AMINO]-5-[(3S)-2-OXOPYRROLIDIN-3-YL]PENTANOATE
Authors:Tan, J, Perbandt, M, Mesters, J.R, Hilgenfeld, R.
Deposit date:2011-07-24
Release date:2012-08-08
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:3C Protease of Enterovirus 68: Structure-Based Design of Michael Acceptor Inhibitors and Their Broad-Spectrum Antiviral Effects Against Picornaviruses.
J.Virol., 87, 2013
3ZVC
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BU of 3zvc by Molmil
3C protease of Enterovirus 68 complexed with Michael receptor inhibitor 82
Descriptor: 3C PROTEASE, ETHYL (5S,8S,11R)-8-BENZYL-5-(3-TERT-BUTOXY-3-OXOPROPYL)-3,6,9-TRIOXO-11-{[(3S)-2-OXOPYRROLIDIN-3-YL]METHYL}-1-PHENYL-2-OXA-4,7,10-TRIAZATETRADECAN-14-OATE
Authors:Tan, J, Perbandt, M, Mesters, J.R, Hilgenfeld, R.
Deposit date:2011-07-24
Release date:2012-08-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:3C Protease of Enterovirus 68: Structure-Based Design of Michael Acceptor Inhibitors and Their Broad-Spectrum Antiviral Effects Against Picornaviruses.
J.Virol., 87, 2013
1N22
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BU of 1n22 by Molmil
(+)-Bornyl Diphosphate Synthase: Complex with Mg, pyrophosphate, and (4R)-7-aza-7,8-dihydrolimonene
Descriptor: (+)-bornyl diphosphate synthase, (1R)-DIMETHYL-(4-METHYL-CYCLOHEX-3-ENYL)-AMINE, MAGNESIUM ION, ...
Authors:Whittington, D.A, Wise, M.L, Urbansky, M, Coates, R.M, Croteau, R.B, Christianson, D.W.
Deposit date:2002-10-21
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Bornyl diphosphate synthase: Structure and strategy for carbocation manipulation by a terpenoid cyclase
Proc.Natl.Acad.Sci.USA, 99, 2002
1N24
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BU of 1n24 by Molmil
(+)-Bornyl diphosphate synthase: Complex with Mg and product
Descriptor: (+)-BORNYL DIPHOSPHATE, (+)-bornyl diphosphate synthase, MAGNESIUM ION
Authors:Whittington, D.A, Wise, M.L, Urbansky, M, Coates, R.M, Croteau, R.B, Christianson, D.W.
Deposit date:2002-10-21
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Bornyl diphosphate synthase: Structure and strategy for carbocation manipulation by a terpenoid cyclase
Proc.Natl.Acad.Sci.USA, 99, 2002
1N23
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BU of 1n23 by Molmil
(+)-Bornyl diphosphate synthase: Complex with Mg, pyrophosphate, and (1R,4S)-2-azabornane
Descriptor: (+)-bornyl diphosphate synthase, (1R,4S)-2-AZABORNANE, MAGNESIUM ION, ...
Authors:Whittington, D.A, Wise, M.L, Urbansky, M, Coates, R.M, Croteau, R.B, Christianson, D.W.
Deposit date:2002-10-21
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Bornyl diphosphate synthase: Structure and strategy for carbocation manipulation by a terpenoid cyclase
Proc.Natl.Acad.Sci.USA, 99, 2002
1WKO
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BU of 1wko by Molmil
Terminal flower 1 (tfl1) from arabidopsis thaliana
Descriptor: TERMINAL FLOWER 1 protein
Authors:Miller, D, Banfield, M.J, Winter, V.J, Brady, R.L.
Deposit date:2004-06-01
Release date:2005-06-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A divergent external loop confers antagonistic activity on floral regulators FT and TFL1.
Embo J., 25, 2006
9FCT
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BU of 9fct by Molmil
BtuJ1 - Bacteroides thetaiotaomicron B12 scavenging protein
Descriptor: CYANOCOBALAMIN, DUF4465 domain-containing protein
Authors:Clarke, C, Banasik, M, Pickersgill, R.
Deposit date:2024-05-15
Release date:2024-10-16
Method:X-RAY DIFFRACTION (1.603 Å)
Cite:To be released (2024).
To Be Published
2GQ4
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BU of 2gq4 by Molmil
Crystal structure of an RNA racemate
Descriptor: CALCIUM ION, GLYCEROL, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), ...
Authors:Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
Deposit date:2006-04-20
Release date:2006-06-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
2GQ6
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BU of 2gq6 by Molmil
Crystal structure of an RNA racemate
Descriptor: CALCIUM ION, GLYCEROL, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), ...
Authors:Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
Deposit date:2006-04-20
Release date:2006-06-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
2GQ5
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BU of 2gq5 by Molmil
Crystal structure of an RNA racemate
Descriptor: CALCIUM ION, GLYCEROL, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), ...
Authors:Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
Deposit date:2006-04-20
Release date:2006-06-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
2GPM
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BU of 2gpm by Molmil
Crystal structure of an RNA racemate
Descriptor: CALCIUM ION, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3')
Authors:Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
Deposit date:2006-04-18
Release date:2006-06-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
2GQ7
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BU of 2gq7 by Molmil
Crystal structure of an RNA racemate
Descriptor: CALCIUM ION, GLYCEROL, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), ...
Authors:Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
Deposit date:2006-04-20
Release date:2006-06-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
1R3O
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BU of 1r3o by Molmil
Crystal structure of the first RNA duplex in L-conformation at 1.9A resolution
Descriptor: L-RNA
Authors:Vallazza, M, Perbandt, M, Klussmann, S, Rypniewski, W, Erdmann, V.A, Betzel, C.
Deposit date:2003-10-02
Release date:2003-12-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:First look at RNA in L-configuration.
Acta Crystallogr.,Sect.D, 60, 2004
4F8C
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BU of 4f8c by Molmil
Structure of the Cif:Nedd8 complex - Yersinia pseudotuberculosis Cycle Inhibiting Factor in complex with human Nedd8
Descriptor: 1,2-ETHANEDIOL, Cycle Inhibiting Factor, NEDD8
Authors:Crow, A, Banfield, M.
Deposit date:2012-05-17
Release date:2012-06-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The molecular basis of Nedd8 deamidation by the bacterial effector protein Cif
Proc.Natl.Acad.Sci.USA, 2012
1WKP
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BU of 1wkp by Molmil
Flowering locus t (ft) from arabidopsis thaliana
Descriptor: FLOWERING LOCUS T protein, SULFATE ION
Authors:Miller, D, Banfield, M.J, Winter, V.J, Brady, R.L.
Deposit date:2004-06-01
Release date:2005-06-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A divergent external loop confers antagonistic activity on floral regulators FT and TFL1.
Embo J., 25, 2006
4GUF
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BU of 4guf by Molmil
1.5 Angstrom Crystal Structure of the Salmonella enterica 3-Dehydroquinate Dehydratase (aroD) E86A Mutant
Descriptor: 3-dehydroquinate dehydratase, CHLORIDE ION
Authors:Light, S.H, Minasov, G, Duban, M.-E, Shuvalova, L, Kwon, K, Lavie, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-08-29
Release date:2012-09-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Reassessing the type I dehydroquinate dehydratase catalytic triad: Kinetic and structural studies of Glu86 mutants.
Protein Sci., 22, 2013
1E3S
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BU of 1e3s by Molmil
Rat brain 3-hydroxyacyl-CoA dehydrogenase binary complex with NADH
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SHORT CHAIN 3-HYDROXYACYL-COA DEHYDROGENASE
Authors:Powell, A.J, Read, J.A, Banfield, M.J, Brady, R.L.
Deposit date:2000-06-22
Release date:2001-05-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Recognition of Structurally Diverse Substrates by Type II 3-Hydroxyacyl-Coa Dehydrogenase (Hadh II) Amyloid-Beta Binding Alcohol Dehydrogenase (Abad)
J.Mol.Biol., 303, 2000
3PVF
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BU of 3pvf by Molmil
Structure of C126S mutant of Plasmodium falciparum triosephosphate isomerase complexed with PGA
Descriptor: 2-PHOSPHOGLYCOLIC ACID, Triosephosphate isomerase
Authors:Samanta, M, Banerjee, M, Murthy, M.R.N, Balaram, H, Balaram, P.
Deposit date:2010-12-07
Release date:2011-04-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Probing the role of the fully conserved Cys126 in triosephosphate isomerase by site-specific mutagenesis--distal effects on dimer stability.
Febs J., 278, 2011
1N21
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BU of 1n21 by Molmil
(+)-Bornyl Diphosphate Synthase: Cocrystal with Mg and 3-aza-2,3-dihydrogeranyl diphosphate
Descriptor: (+)-bornyl diphosphate synthase, 2-[METHYL-(4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE, MAGNESIUM ION
Authors:Whittington, D.A, Wise, M.L, Urbansky, M, Coates, R.M, Croteau, R.B, Christianson, D.W.
Deposit date:2002-10-21
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Bornyl diphosphate synthase: Structure and strategy for carbocation manipulation by a terpenoid synthase
Proc.Natl.Acad.Sci.USA, 99, 2002
1N1Z
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BU of 1n1z by Molmil
(+)-Bornyl Diphosphate Synthase: Complex with Mg and pyrophosphate
Descriptor: (+)-bornyl diphosphate synthase, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, ...
Authors:Whittington, D.A, Wise, M.L, Urbansky, M, Coates, R.M, Croteau, R.B, Christianson, D.W.
Deposit date:2002-10-21
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Bornyl diphosphate synthase: Structure and strategy for carbocation manipulation by a terpenoid cyclase
Proc.Natl.Acad.Sci.USA, 99, 2002
5FO5
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BU of 5fo5 by Molmil
Structure of the DNA-binding domain of Escherichia coli methionine biosynthesis regulator MetR
Descriptor: 1,2-ETHANEDIOL, HTH-TYPE TRANSCRIPTIONAL REGULATOR METR, MAGNESIUM ION
Authors:Punekar, A.S, Porter, J, Urbanowski, M.L, Stauffer, G.V, Carr, S.B, Phillips, S.E.
Deposit date:2015-11-18
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structural Basis for DNA Recognition by the Transcription Regulator Metr.
Acta Crystallogr.,Sect.F, 72, 2016
1N20
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BU of 1n20 by Molmil
(+)-Bornyl Diphosphate Synthase: Complex with Mg and 3-aza-2,3-dihydrogeranyl diphosphate
Descriptor: (+)-bornyl diphosphate synthase, 2-[METHYL-(4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATE, MAGNESIUM ION
Authors:Whittington, D.A, Wise, M.L, Urbansky, M, Coates, R.M, Croteau, R.B, Christianson, D.W.
Deposit date:2002-10-21
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Bornyl Diphosphate Synthase: Structure and Strategy for Carbocation Manipulation by a Terpenoid Cyclase
Proc.Natl.Acad.Sci.USA, 99, 2002
1N1B
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BU of 1n1b by Molmil
Crystal Structure of (+)-Bornyl Diphosphate Synthase from Sage
Descriptor: (+)-bornyl diphosphate synthase, MAGNESIUM ION, MERCURY (II) ION
Authors:Whittington, D.A, Wise, M.L, Urbansky, M, Coates, R.M, Croteau, R.B, Christianson, D.W.
Deposit date:2002-10-17
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bornyl Diphosphate Synthase: Structure and Strategy for Carbocation Manipulation by a Terpenoid Cyclase
Proc.Natl.Acad.Sci.USA, 99, 2002
1G8T
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BU of 1g8t by Molmil
SM ENDONUCLEASE FROM SERATIA MARCENSCENS AT 1.1 A RESOLUTION
Descriptor: MAGNESIUM ION, NUCLEASE SM2 ISOFORM, SULFATE ION
Authors:Lunin, V.V, Perbandt, M, Betzel, C.H, Mikhailov, A.M.
Deposit date:2000-11-21
Release date:2000-12-06
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Atomic structure of the Serratia marcescens endonuclease at 1.1 A resolution and the enzyme reaction mechanism.
Acta Crystallogr.,Sect.D, 56, 2000
4GUH
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BU of 4guh by Molmil
1.95 Angstrom Crystal Structure of the Salmonella enterica 3-Dehydroquinate Dehydratase (aroD) E86A Mutant in Complex with Dehydroshikimate (Crystal Form #2)
Descriptor: (4S,5R)-4,5-dihydroxy-3-oxocyclohex-1-ene-1-carboxylic acid, 3-dehydroquinate dehydratase, NICKEL (II) ION
Authors:Light, S.H, Minasov, G, Duban, M.-E, Shuvalova, L, Kwon, K, Lavie, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-08-29
Release date:2012-09-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Reassessing the type I dehydroquinate dehydratase catalytic triad: Kinetic and structural studies of Glu86 mutants.
Protein Sci., 22, 2013

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