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PDB: 62 results

1W9M
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AS-isolated hybrid cluster protein from Desulfovibrio vulgaris X-ray structure at 1.35A resolution using iron anomalous signal
Descriptor: FE-S-O HYBRID CLUSTER, HYDROXYLAMINE REDUCTASE, IRON/SULFUR CLUSTER
Authors:Aragao, D, Macedo, S, Mitchell, E.P, Coelho, D, Romao, C.V, Teixeira, M, Lindley, P.F.
Deposit date:2004-10-14
Release date:2005-02-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural and Functional Relationships in the Hybrid Cluster Protein Family:Structure of the Anaerobically Purified Hybrid Cluster Protein from Desulfovibrio Vulgaris at 1.35 A Resolution
Acta Crystallogr.,Sect.D, 64, 2008
1OA1
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REDUCED HYBRID CLUSTER PROTEIN (HCP) FROM DESULFOVIBRIO VULGARIS HILDENBOROUGH STRUCTURE AT 1.55A RESOLUTION USING SYNCHROTRON RADIATION.
Descriptor: FE4-S3 CLUSTER, GLYCEROL, HYDROXYLAMINE REDUCTASE, ...
Authors:Aragao, D, Macedo, S, Mitchell, E.P, Romao, C.V, Liu, M.Y, Frazao, C, Saraiva, L.M, Xavier, A.V, Legall, J, Van Dongen, W.M.A.M, Hagen, W.R, Teixeira, M, Carrondo, M.A, Lindley, P.F.
Deposit date:2002-12-23
Release date:2003-04-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Reduced Hybrid Cluster Proteins (Hcp) from Desulfovibrio Desulfuricans Atcc 27774 and Desulfovibrio Vulgaris (Hildenborough): X-Ray Structures at High Resolution Using Synchrotron Radiation
J.Biol.Inorg.Chem., 8, 2003
1UPX
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The crystal structure of the Hybrid Cluster Protein from Desulfovibrio desulfuricans containing molecules in the oxidized and reduced states.
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FE4-S3 CLUSTER, HYDROXYLAMINE REDUCTASE, ...
Authors:Aragao, D, Macedo, S, Mitchell, E.P, Lindley, P.F.
Deposit date:2003-10-14
Release date:2003-12-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structure of the Hybrid Cluster Protein (Hcp) from Desulfovibrio Desulfuricans Atcc 27774 Containing Molecules in the Oxidized and Reduced States
Acta Crystallogr.,Sect.D, 59, 2003
1GYO
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Crystal structure of the di-tetraheme cytochrome c3 from Desulfovibrio gigas at 1.2 Angstrom resolution
Descriptor: CYTOCHROME C3, A DIMERIC CLASS III C-TYPE CYTOCHROME, GLYCEROL, ...
Authors:Aragao, D, Frazao, C, Sieker, L, Sheldrick, G.M, Legall, J, Carrondo, M.A.
Deposit date:2002-04-29
Release date:2002-05-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of Dimeric Cytochrome C3 from Desulfovibrio Gigas at 1.2 A Resolution
Acta Crystallogr.,Sect.D, 59, 2003
2UX8
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Crystal Structure of Sphingomonas elodea ATCC 31461 Glucose-1- phosphate uridylyltransferase in Complex with glucose-1-phosphate.
Descriptor: 1-O-phosphono-alpha-D-glucopyranose, GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE
Authors:Aragao, D, Fialho, A.M, Marques, A.R, Frazao, C, Sa-Correia, I, Mitchell, E.P.
Deposit date:2007-03-27
Release date:2007-05-22
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The Complex of Sphingomonas Elodea Atcc 31461 Glucose-1-Phosphate Uridylyltransferase with Glucose-1-Phosphate Reveals a Novel Quaternary Structure, Unique Among Nucleoside Diphosphate-Sugar Pyrophosphorylase Members.
J.Bacteriol., 189, 2007
7RG4
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Importin alpha2 in complex with p50 NLS
Descriptor: Importin subunit alpha-1, Isoform 3 of Nuclear factor NF-kappa-B p105 subunit
Authors:Smith, K.M, Tsimbalyuk, S, Aragao, D, Forwood, J.K.
Deposit date:2021-07-14
Release date:2021-08-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:MERS-CoV ORF4b employs an unusual binding mechanism to target IMP alpha and block innate immunity.
Nat Commun, 13, 2022
6NZX
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Hadesarchaea YNP_N21 cytochrome b5 domain protein (KUO41884.1)
Descriptor: Cytochrome B5, PROTOPORPHYRIN IX CONTAINING FE
Authors:Teakel, S.L, Marama, M.S, Aragao, D, Forwood, J.K, Cahill, M.A.
Deposit date:2019-02-14
Release date:2019-03-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Hadesarchaea YNP_N21 cytochrome b5 domain protein (KUO41884.1)
To Be Published
7RG2
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Importin alpha2 in complex with MERS ORF4B R33A mutant
Descriptor: Importin subunit alpha-1, ORF4b
Authors:Munasinghe, T.S, Tsimbalyuk, S, Roby, J.A, Aragao, D, Forwood, J.K.
Deposit date:2021-07-14
Release date:2021-08-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:MERS-CoV ORF4b employs an unusual binding mechanism to target IMP alpha and block innate immunity.
Nat Commun, 13, 2022
7RG3
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Importin alpha2 in complex with MERS ORF4B R37A mutant
Descriptor: Importin subunit alpha-1, ORF4b
Authors:Munasinghe, T.S, Tsimbalyuk, S, Roby, J.A, Aragao, D, Forwood, J.K.
Deposit date:2021-07-14
Release date:2021-08-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:MERS-CoV ORF4b employs an unusual binding mechanism to target IMP alpha and block innate immunity.
Nat Commun, 13, 2022
7RG5
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Importin alpha3 in complex with p50 NLS
Descriptor: Importin subunit alpha-3, Isoform 3 of Nuclear factor NF-kappa-B p105 subunit
Authors:Smith, K.M, Tsimbalyuk, S, Aragao, D, Forwood, J.K.
Deposit date:2021-07-14
Release date:2021-08-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:MERS-CoV ORF4b employs an unusual binding mechanism to target IMP alpha and block innate immunity.
Nat Commun, 13, 2022
7RG6
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Importin alpha2 in complex with ORF4B Bat coronavirus HKU5
Descriptor: Importin subunit alpha-1, Non-structural protein ORF4b
Authors:Foster, J.K, Tsimbalyuk, S, Roby, J.A, Aragao, D, Forwood, J.K.
Deposit date:2021-07-14
Release date:2021-08-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:MERS-CoV ORF4b employs an unusual binding mechanism to target IMP alpha and block innate immunity.
Nat Commun, 13, 2022
6NRP
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Putative short-chain dehydrogenase/reductase (SDR) from Acinetobacter baumannii
Descriptor: 3-oxoacyl-ACP reductase FabG
Authors:Cross, E.M, Smith, K.M, Shaw, K.I, Aragao, D, Forwood, J.K.
Deposit date:2019-01-23
Release date:2019-02-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insights into Acinetobacter baumannii fatty acid synthesis 3-oxoacyl-ACP reductases.
Sci Rep, 11, 2021
3PDS
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BU of 3pds by Molmil
Irreversible Agonist-Beta2 Adrenoceptor Complex
Descriptor: 8-hydroxy-5-[(1R)-1-hydroxy-2-({2-[3-methoxy-4-(3-sulfanylpropoxy)phenyl]ethyl}amino)ethyl]quinolin-2(1H)-one, CHOLESTEROL, Fusion protein Beta-2 adrenergic receptor/Lysozyme, ...
Authors:Rosenbaum, D.M, Zhang, C, Lyons, J.A, Holl, R, Aragao, D, Arlow, D.H, Rasmussen, S.G.F, Choi, H.-J, DeVree, B.T, Sunahara, R.K, Chae, P.S, Gellman, S.H, Dror, R.O, Shaw, D.E, Weis, W.I, Caffrey, M, Gmeiner, P, Kobilka, B.K.
Deposit date:2010-10-24
Release date:2011-01-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure and function of an irreversible agonist-beta(2) adrenoceptor complex
Nature, 469, 2011
5WED
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BU of 5wed by Molmil
Structure of bacterial type II NADH dehydrogenase from Caldalkalibacillus thermarum at 2.15A resolution
Descriptor: FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Nakatani, Y, Aragao, D, Cook, G.M.
Deposit date:2017-07-09
Release date:2017-10-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of type II NADH:quinone oxidoreductase from Caldalkalibacillus thermarum with an improved resolution of 2.15 angstrom.
Acta Crystallogr F Struct Biol Commun, 73, 2017
8QXX
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HCMV DNA polymerase processivity factor UL44 phosphorylated NLS 410-433 bound to mouse importin alpha 2
Descriptor: DNA polymerase processivity factor, Importin subunit alpha-1
Authors:Cross, E.M, Marin, O, Ariawan, D, Aragao, D, Cozza, G, Di Iorio, E, Forwood, J.K, Alvisi, G.
Deposit date:2023-10-25
Release date:2023-11-08
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural determinants of phosphorylation-dependent nuclear transport of HCMV DNA polymerase processivity factor UL44.
Febs Lett., 598, 2024
8QXW
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BU of 8qxw by Molmil
HCMV DNA polymerase processivity factor UL44 unphosphorylated NLS 410-433 bound to mouse importin alpha 2
Descriptor: DNA polymerase processivity factor, Importin subunit alpha-1
Authors:Cross, E.M, Marin, O, Ariawan, D, Aragao, D, Cozza, G, Di Iorio, E, Forwood, J.K, Alvisi, G.
Deposit date:2023-10-25
Release date:2023-11-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural determinants of phosphorylation-dependent nuclear transport of HCMV DNA polymerase processivity factor UL44.
Febs Lett., 598, 2024
1OA0
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BU of 1oa0 by Molmil
REDUCED HYBRID CLUSTER PROTEIN FROM DESULFOVIBRIO DESULFURICANS X-RAY STRUCTURE AT 1.25A RESOLUTION
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FE4-S3 CLUSTER, IRON/SULFUR CLUSTER, ...
Authors:Macedo, S, Aragao, D, Mitchell, E.P, Romao, C.V, Liu, M.Y, Frazao, C, Saraiva, L.M, Xavier, A.V, Legall, J, Van Dongen, W.M.A.M, Hagen, W.R, Teixeira, M, Carrondo, M.A, Lindley, P.F.
Deposit date:2002-12-23
Release date:2003-04-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Reduced hybrid cluster proteins (HCP) from Desulfovibrio desulfuricans ATCC 27774 and Desulfovibrio vulgaris (Hildenborough): X-ray structures at high resolution using synchrotron radiation.
J. Biol. Inorg. Chem., 8, 2003
6YB7
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SARS-CoV-2 main protease with unliganded active site (2019-nCoV, coronavirus disease 2019, COVID-19).
Descriptor: 3C-like proteinase, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE
Authors:Owen, C.D, Lukacik, P, Strain-Damerell, C.M, Douangamath, A, Powell, A.J, Fearon, D, Brandao-Neto, J, Crawshaw, A.D, Aragao, D, Williams, M, Flaig, R, Hall, D.R, McAuley, K.E, Mazzorana, M, Stuart, D.I, von Delft, F, Walsh, M.A.
Deposit date:2020-03-16
Release date:2020-03-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:COVID-19 main protease with unliganded active site
To Be Published
6Y84
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SARS-CoV-2 main protease with unliganded active site (2019-nCoV, coronavirus disease 2019, COVID-19)
Descriptor: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE
Authors:Owen, C.D, Lukacik, P, Strain-Damerell, C.M, Douangamath, A, Powell, A.J, Fearon, D, Brandao-Neto, J, Crawshaw, A.D, Aragao, D, Williams, M, Flaig, R, Hall, D.R, McAuley, K.E, Mazzorana, M, Stuart, D.I, von Delft, F, Walsh, M.A.
Deposit date:2020-03-03
Release date:2020-03-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:COVID-19 main protease with unliganded active site
To Be Published
4UXW
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Structure of delta4-DgkA-apo in 9.9 MAG
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (4S)-2-METHYL-2,4-PENTANEDIOL, DIACYLGLYCEROL KINASE, ...
Authors:Li, D, Pye, V.E, Aragao, D, Caffrey, M.
Deposit date:2014-08-27
Release date:2015-09-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Ternary Structure Reveals Mechanism of a Membrane Diacylglycerol Kinase.
Nat.Commun., 6, 2015
6BVZ
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Importin alpha 3 in cargo free state
Descriptor: Importin subunit alpha-3
Authors:Smith, K.M, Tsimbalyuk, S, Edwards, M.R, Aragao, D, Cross, E.M, Basler, C.F, Forwood, J.K.
Deposit date:2017-12-14
Release date:2018-07-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for importin alpha 3 specificity of W proteins in Hendra and Nipah viruses.
Nat Commun, 9, 2018
6VZ6
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Methanococcoides burtonii cytochrome b5 domain protein (WP 011499504.1)
Descriptor: Cytochrome b5-domain protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Teakel, S.L, Forwood, J.K, Aragao, D, Cahill, M.A, Marama, M.
Deposit date:2020-02-27
Release date:2020-03-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Methanococcoides burtonii cytochrome b5 domain protein (WP 011499504.1)
To Be Published
6BW9
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Hendra virus W protein C-terminus in complex with Importin alpha 3 crystal form 1
Descriptor: Importin subunit alpha-3, Protein W
Authors:Tsimbalyuk, S, Smith, K.M, Edwards, M.R, Aragao, D, Cross, E.M, Basler, C.F, Forwood, J.K.
Deposit date:2017-12-14
Release date:2018-07-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for importin alpha 3 specificity of W proteins in Hendra and Nipah viruses.
Nat Commun, 9, 2018
5J36
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Crystal structure of 60-mer BFDV Capsid Protein
Descriptor: Beak and feather disease virus capsid protein, PHOSPHATE ION
Authors:Sarker, S, Raidal, S, Aragao, D, Forwood, J.K.
Deposit date:2016-03-30
Release date:2016-05-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural insights into the assembly and regulation of distinct viral capsid complexes.
Nat Commun, 7, 2016
5J09
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BU of 5j09 by Molmil
Crystal structure of decameric BFDV Capsid Protein
Descriptor: Beak and feather disease virus capsid protein
Authors:Sarker, S, Raidal, S, Aragao, D, Forwood, J.K.
Deposit date:2016-03-28
Release date:2016-05-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into the assembly and regulation of distinct viral capsid complexes.
Nat Commun, 7, 2016

 

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