Structure of bacterial type II NADH dehydrogenase from Caldalkalibacillus thermarum at 2.15A resolution

Summary for 5WED

DescriptorFAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE (3 entities in total)
Functional Keywordsrossmann fold, dehydrogenase, nucleotide binding, membrane/cytoplasm, oxidoreductase
Biological sourceCaldalkalibacillus thermarum TA2.A1
Total number of polymer chains4
Total molecular weight181430.15
Nakatani, Y.,Aragao, D.,Cook, G.M. (deposition date: 2017-07-09, release date: 2017-10-18, Last modification date: 2018-04-18)
Primary citation
Nakatani, Y.,Jiao, W.,Aragao, D.,Shimaki, Y.,Petri, J.,Parker, E.J.,Cook, G.M.
Crystal structure of type II NADH:quinone oxidoreductase from Caldalkalibacillus thermarum with an improved resolution of 2.15 angstrom.
Acta Crystallogr F Struct Biol Commun, 73:541-549, 2017
PubMed: 28994401 (PDB entries with the same primary citation)
DOI: 10.1107/S2053230X17013073
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.239100.3%6.1%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution