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PDB: 126 results

1E8A
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The three-dimensional structure of human S100A12
Descriptor: CALCIUM ION, S100A12
Authors:Moroz, O.V, Antson, A.A, Murshudov, G.N, Maitland, N.J, Dodson, G.G, Wilson, K.S, Skibshoj, I, Lukanidin, E.M, Bronstein, I.B.
Deposit date:2000-09-18
Release date:2001-01-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The Three-Dimensional Structure of Human S100A12
Acta Crystallogr.,Sect.D, 57, 2001
4YCP
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E. coli dihydrouridine synthase C (DusC) in complex with tRNATrp
Descriptor: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, SULFATE ION, ...
Authors:Byrne, R.T, Jenkins, H.T, Peters, D.T, Whelan, F, Stowell, J, Aziz, N, Kasatsky, P, Rodnina, M.V, Koonin, E.V, Konevega, A.L, Antson, A.A.
Deposit date:2015-02-20
Release date:2015-04-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
4YCO
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E. coli dihydrouridine synthase C (DusC) in complex with tRNAPhe
Descriptor: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Byrne, R.T, Jenkins, H.T, Peters, D.T, Whelan, F, Stowell, J, Aziz, N, Kasatsky, P, Rodnina, M.V, Koonin, E.V, Konevega, A.L, Antson, A.A.
Deposit date:2015-02-20
Release date:2015-04-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XP7
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Crystal structure of Human tRNA dihydrouridine synthase 2
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, tRNA-dihydrouridine(20) synthase [NAD(P)+]-like
Authors:Whelan, F, Jenkins, H.T, Griffiths, S, Byrne, R.T, Dodson, E.J, Antson, A.A.
Deposit date:2015-01-16
Release date:2015-01-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:From bacterial to human dihydrouridine synthase: automated structure determination.
Acta Crystallogr.,Sect.D, 71, 2015
2YCT
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Tyrosine phenol-lyase from Citrobacter freundii in complex with pyridine N-oxide and the quinonoid intermediate formed with L-alanine
Descriptor: (2E)-2-{[(Z)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4(1H)-YLIDENE}METHYL]IMINO}PROPANOIC ACID, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, PHOSPHATE ION, ...
Authors:Milic, D, Demidkina, T.V, Faleev, N.G, Phillips, R.S, Matkovic-Calogovic, D, Antson, A.A.
Deposit date:2011-03-16
Release date:2011-09-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystallographic Snapshots of Tyrosine Phenol-Lyase Show that Substrate Strain Plays a Role in C-C Bond Cleavage
J.Am.Chem.Soc., 133, 2011
2YCP
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F448H mutant of tyrosine phenol-lyase from Citrobacter freundii in complex with quinonoid intermediate formed with 3-fluoro-L-tyrosine
Descriptor: (2E)-3-(3-fluoro-4-hydroxyphenyl)-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}propanoic acid, 1,2-ETHANEDIOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ...
Authors:Milic, D, Demidkina, T.V, Faleev, N.G, Phillips, R.S, Matkovic-Calogovic, D, Antson, A.A.
Deposit date:2011-03-16
Release date:2011-09-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic Snapshots of Tyrosine Phenol-Lyase Show that Substrate Strain Plays a Role in C-C Bond Cleavage
J.Am.Chem.Soc., 133, 2011
2YCN
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Y71F mutant of tyrosine phenol-lyase from Citrobacter freundii in complex with quinonoid intermediate formed with 3-fluoro-L-tyrosine
Descriptor: (2E)-3-(3-fluoro-4-hydroxyphenyl)-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}propanoic acid, DI(HYDROXYETHYL)ETHER, POTASSIUM ION, ...
Authors:Milic, D, Demidkina, T.V, Faleev, N.G, Phillips, R.S, Matkovic-Calogovic, D, Antson, A.A.
Deposit date:2011-03-16
Release date:2011-09-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystallographic Snapshots of Tyrosine Phenol-Lyase Show that Substrate Strain Plays a Role in C-C Bond Cleavage
J.Am.Chem.Soc., 133, 2011
2YCB
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BU of 2ycb by Molmil
Structure of the archaeal beta-CASP protein with N-terminal KH domains from Methanothermobacter thermautotrophicus
Descriptor: CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Silva, A.P.G, Chechik, M, Byrne, R.T, Waterman, D.G, Ng, C.L, Dodson, E.J, Koonin, E.V, Antson, A.A, Smits, C.
Deposit date:2011-03-13
Release date:2011-05-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure and Activity of a Novel Archaeal Beta-Casp Protein with N-Terminal Kh Domains.
Structure, 19, 2011
4XVN
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BU of 4xvn by Molmil
Crystal structure of the small terminase from thermophilic phage G20C
Descriptor: Small terminase
Authors:Loredo-Varela, J, Jenkins, H.T, Chechik, M, Greive, S.J, Antson, A.A.
Deposit date:2015-01-27
Release date:2016-02-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the small terminase from thermophilic phage G20C
To Be Published
2JES
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BU of 2jes by Molmil
Portal protein (gp6) from bacteriophage SPP1
Descriptor: CALCIUM ION, MERCURY (II) ION, PORTAL PROTEIN, ...
Authors:Lebedev, A.A, Krause, M.H, Isidro, A.L, Vagin, A.A, Orlova, E.V, Turner, J, Dodson, E.J, Tavares, P, Antson, A.A.
Deposit date:2007-01-21
Release date:2007-03-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Framework for DNA Translocation Via the Viral Portal Protein
Embo J., 26, 2007
2YHK
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BU of 2yhk by Molmil
D214A mutant of tyrosine phenol-lyase from Citrobacter freundii
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, DI(HYDROXYETHYL)ETHER, POTASSIUM ION, ...
Authors:Milic, D, Demidkina, T.V, Matkovic-Calogovic, D, Antson, A.A.
Deposit date:2011-05-03
Release date:2012-05-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal Structure of Citrobacter Freundii Asp214Ala Tyrosine Phenol-Lyase Reveals that Asp214 is Critical for Maintaining a Strain in the Internal Aldimine
Croatica Chemica Acta, 85, 2012
4ZJN
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BU of 4zjn by Molmil
Crystal structure of the bacteriophage G20C portal protein
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Portal protein
Authors:Williams, L.S, Turkenburg, J.P, Levdikov, V.M, Minakhin, L, Severinov, K, Antson, A.A.
Deposit date:2015-04-29
Release date:2015-05-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure of the bacteriophage G20C portal protein
To be published
2JK3
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BU of 2jk3 by Molmil
CRYSTAL STRUCTURE OF THE HLYIIR MUTANT PROTEIN WITH RESIDUES 169-186 SUBSTITUTED BY GSSGSSG LINKER
Descriptor: HEMOLYSIN II REGULATORY PROTEIN, SULFATE ION
Authors:Kovalevskiy, O.V, Solonin, A.S, Antson, A.A.
Deposit date:2008-08-11
Release date:2008-08-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Investigation of Transcriptional Regulator Hlyiir: Influence of a Disordered Region on Protein Fold and Dimerization.
Proteins, 78, 2010
2JEU
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BU of 2jeu by Molmil
Transcription activator structure reveals redox control of a replication initiation reaction
Descriptor: REGULATORY PROTEIN E2
Authors:Sanders, C.M, Sizov, D, Seavers, P.R, Ortiz-Lombardia, M, Antson, A.A.
Deposit date:2007-01-23
Release date:2007-05-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Transcription Activator Structure Reveals Redox Control of a Replication Initiation Reaction.
Nucleic Acids Res., 35, 2007
2JEX
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BU of 2jex by Molmil
Transcription activator structure reveals redox control of a replication initiation reaction
Descriptor: REGULATORY PROTEIN E2
Authors:Sanders, C.M, Sizov, D, Seavers, P.R, Ortiz-Lombardia, M, Antson, A.A.
Deposit date:2007-01-24
Release date:2007-05-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Transcription Activator Structure Reveals Redox Control of a Replication Initiation Reaction.
Nucleic Acids Res., 35, 2007
2JJ7
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BU of 2jj7 by Molmil
Crystal structure of the HlyIIR mutant protein with residues 170-185 substituted by alanine
Descriptor: HEMOLYSIN II REGULATORY PROTEIN
Authors:Kovalevskiy, O.V, Antson, A.A, Solonin, A.S.
Deposit date:2008-03-18
Release date:2008-04-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:[Contraction of the disordered loop located within C-terminal domain of the transcriptional regulator HlyIIR causes its structural rearrangement].
Mol.Biol.(Moscow), 43, 2009
6IBG
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BU of 6ibg by Molmil
Bacteriophage G20c portal protein crystal structure for construct with intact N-terminus
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Portal protein
Authors:Bayfield, O.W, Klimuk, E, Winkler, D.C, Hesketh, E.L, Chechik, M, Cheng, N, Dykeman, E.C, Minakhin, L, Ranson, N.A, Severinov, K, Steven, A.C, Antson, A.A.
Deposit date:2018-11-30
Release date:2019-01-23
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Cryo-EM structure and in vitro DNA packaging of a thermophilic virus with supersized T=7 capsids.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
7QIK
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BU of 7qik by Molmil
SARS-CoV-2 Nucleocapsid phosphopeptide 193-200 bound to human 14-3-3 sigma
Descriptor: 14-3-3 protein sigma, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BROMIDE ION, ...
Authors:Sluchanko, N.N, Tugaeva, K.V, Smith, J.L.R, Antson, A.A.
Deposit date:2021-12-15
Release date:2021-12-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:SARS-CoV-2 Nucleocapsid phosphopeptide 193-200 bound to human 14-3-3 sigma
To Be Published
7QIP
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BU of 7qip by Molmil
SARS-CoV-2 Nucleocapsid phosphopeptide 201-210 bound to human 14-3-3 sigma
Descriptor: 14-3-3 protein sigma, ARG-GLY-TPO-SER-PRO-ALA-ARG-MET, CHLORIDE ION
Authors:Sluchanko, N.N, Tugaeva, K.V, Smith, J.L.R, Antson, A.A.
Deposit date:2021-12-15
Release date:2021-12-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:SARS-CoV-2 Nucleocapsid phosphopeptide 193-200 bound to human 14-3-3 sigma
To Be Published
6I9E
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BU of 6i9e by Molmil
Thermophage P23-45 empty expanded capsid
Descriptor: Auxiliary protein, Major head protein
Authors:Bayfield, O.W, Klimuk, E, Winkler, D.C, Hesketh, E.L, Chechik, M, Cheng, N, Dykeman, E.C, Minakhin, L, Ranson, N.A, Severinov, K, Steven, A.C, Antson, A.A.
Deposit date:2018-11-23
Release date:2019-02-06
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.74 Å)
Cite:Cryo-EM structure and in vitro DNA packaging of a thermophilic virus with supersized T=7 capsids.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6IBC
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BU of 6ibc by Molmil
Thermophage P23-45 procapsid
Descriptor: Major head protein
Authors:Bayfield, O.W, Klimuk, E, Winkler, D.C, Hesketh, E.L, Chechik, M, Cheng, N, Dykeman, E.C, Minakhin, L, Ranson, N.A, Severinov, K, Steven, A.C, Antson, A.A.
Deposit date:2018-11-29
Release date:2019-02-13
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.39 Å)
Cite:Cryo-EM structure and in vitro DNA packaging of a thermophilic virus with supersized T=7 capsids.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
1GWF
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BU of 1gwf by Molmil
Compound II structure of Micrococcus Lysodeikticus catalase
Descriptor: ACETATE ION, Catalase, OXYGEN ATOM, ...
Authors:Murshudov, G.N, Grebenko, A.I, Brannigan, J.A, Antson, A.A, Barynin, V.V, Dodson, G.G, Dauter, Z, Wilson, K.S, Melik-Adamyan, W.R.
Deposit date:2002-03-15
Release date:2002-04-26
Last modified:2018-06-20
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:The Structures of Micrococcus Lysodeikticus Catalase, its Ferryl Intermediate (Compound II) and Nadph Complex.
Acta Crystallogr.,Sect.D, 58, 2002
1GWE
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BU of 1gwe by Molmil
Atomic resolution structure of Micrococcus Lysodeikticus catalase
Descriptor: Catalase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Murshudov, G.N, Grebenko, A.I, Brannigan, J.A, Antson, A.A, Barynin, V.V, Dodson, G.G, Dauter, Z, Wilson, K.S, Melik-Adamyan, W.R.
Deposit date:2002-03-15
Release date:2002-04-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (0.88 Å)
Cite:The Structures of Micrococcus Lysodeikticus Catalase, its Ferryl Intermediate (Compound II) and Nadph Complex.
Acta Crystallogr.,Sect.D, 58, 2002
6HPQ
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BU of 6hpq by Molmil
Crystal structure of human Pif1 helicase in complex with AMP-PNP, brominated crystal form.
Descriptor: ATP-dependent DNA helicase PIF1, BROMIDE ION, MAGNESIUM ION, ...
Authors:Ledikov, V.M, Dehghani-Tafti, S, Bax, B, Sanders, C.M, Antson, A.A.
Deposit date:2018-09-21
Release date:2019-01-23
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Structural and functional analysis of the nucleotide and DNA binding activities of the human PIF1 helicase.
Nucleic Acids Res., 47, 2019
1GWH
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BU of 1gwh by Molmil
Atomic resolution structure of Micrococcus Lysodeikticus catalase complexed with NADPH
Descriptor: ACETATE ION, Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Murshudov, G.N, Grebenko, A.I, Brannigan, J.A, Antson, A.A, Barynin, V.V, Dodson, G.G, Dauter, Z, Wilson, K.S, Melik-Adamyan, W.R.
Deposit date:2002-03-15
Release date:2002-03-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:The Structures of Micrococcus Lysodeikticus Catalase, its Ferryl Intermediate (Compound II) and Nadph Complex.
Acta Crystallogr.,Sect.D, 58, 2002

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