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PDB: 267 results

3KB6
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BU of 3kb6 by Molmil
Crystal structure of D-Lactate dehydrogenase from aquifex aeolicus complexed with NAD and Lactic acid
Descriptor: D-lactate dehydrogenase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Antonyuk, S.V, Strange, R.W, Ellis, M.J, Bessho, Y, Kuramitsu, S, Yokoyama, S, Hasnain, S.S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-10-20
Release date:2009-11-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structure of D-lactate dehydrogenase from Aquifex aeolicus complexed with NAD(+) and lactic acid (or pyruvate).
Acta Crystallogr.,Sect.F, 65, 2009
3ZIY
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BU of 3ziy by Molmil
Structure of three-domain heme-Cu nitrite reductase from Ralstonia pickettii at 1.01 A resolution
Descriptor: COPPER (II) ION, COPPER-CONTAINING NITRITE REDUCTASE, HEME C
Authors:Antonyuk, S.V, Han, C, Eady, R.R, Hasnain, S.S.
Deposit date:2013-01-14
Release date:2013-03-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Structures of protein-protein complexes involved in electron transfer.
Nature, 496, 2013
3ZBM
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BU of 3zbm by Molmil
Structure of M92A variant of three-domain heme-Cu nitrite reductase from Ralstonia pickettii
Descriptor: COPPER (II) ION, COPPER-CONTAINING NITRITE REDUCTASE, HEME C
Authors:Antonyuk, S.V, Han, C, Eady, R.R, Hasnain, S.S.
Deposit date:2012-11-10
Release date:2013-04-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structures of protein-protein complexes involved in electron transfer.
Nature, 496, 2013
3ZQY
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BU of 3zqy by Molmil
CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: CARBON MONOOXIDE BOUND L16A VARIANT AT 1.03 A RESOLUTION- NON-RESTRAINT REFINEMENT
Descriptor: CARBON MONOXIDE, CYTOCHROME C', HEME C
Authors:Antonyuk, S.V, Rustage, N, Eady, R.R, Hasnain, S.S.
Deposit date:2011-06-12
Release date:2011-10-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Carbon Monoxide Poisoning is Prevented by the Energy Costs of Conformational Changes in Gas- Binding Haemproteins.
Proc.Natl.Acad.Sci.USA, 108, 2011
8B61
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BU of 8b61 by Molmil
Crystal structure of BfrC protein from Bacteroides fragilis NCTC 9343
Descriptor: Conserved hypothetical lipoprotein, GLYCEROL, pentane-1,3,5-tricarboxylic acid
Authors:Antonyuk, S.V, Barnett, K, Strange, R.W, Olczak, T.
Deposit date:2022-09-25
Release date:2023-05-31
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Bacteroides fragilis expresses three proteins similar to Porphyromonas gingivalis HmuY: Hemophore-like proteins differentially evolved to participate in heme acquisition in oral and gut microbiomes.
Faseb J., 37, 2023
8B6A
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BU of 8b6a by Molmil
Crystal structure of BfrB protein from Bacteroides fragilis NCTC 9343
Descriptor: Conserved hypothetical lipoprotein, GLYCEROL, SULFATE ION
Authors:Antonyuk, S.V, Strange, R.W, Olczak, T.
Deposit date:2022-09-26
Release date:2023-05-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Bacteroides fragilis expresses three proteins similar to Porphyromonas gingivalis HmuY: Hemophore-like proteins differentially evolved to participate in heme acquisition in oral and gut microbiomes.
Faseb J., 37, 2023
8Q6M
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BU of 8q6m by Molmil
Human SOD1 low dose data collecton
Descriptor: ACETATE ION, COPPER (II) ION, SULFATE ION, ...
Authors:Antonyuk, S.V, Hossain, A, Agar, J.N, Hasnain, S.S.
Deposit date:2023-08-14
Release date:2023-12-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Evaluating protein cross-linking as a therapeutic strategy to stabilize SOD1 variants in a mouse model of familial ALS.
Plos Biol., 22, 2024
5G4P
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BU of 5g4p by Molmil
Crystal structure of human hippocalcin at 2.4 A resolution
Descriptor: CALCIUM ION, Neuron-specific calcium-binding protein hippocalcin
Authors:Antonyuk, S.V, Helassa, N, Lian, L.Y, Haynes, L.P, Burgoyne, R.D.
Deposit date:2016-05-15
Release date:2017-05-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Biophysical and functional characterization of hippocalcin mutants responsible for human dystonia.
Hum. Mol. Genet., 26, 2017
5G58
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BU of 5g58 by Molmil
Crystal structure of A190T mutant of human hippocalcin AT 2.5 A resolution
Descriptor: CALCIUM ION, Neuron-specific calcium-binding protein hippocalcin
Authors:Antonyuk, S.V, Helassa, N, Lian, L.Y, Haynes, L.P, Burgoyne, R.D.
Deposit date:2016-05-22
Release date:2017-05-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Biophysical and functional characterization of hippocalcin mutants responsible for human dystonia.
Hum. Mol. Genet., 26, 2017
8CCX
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BU of 8ccx by Molmil
Human SOD1 in complex with S-XL6 cross-linker
Descriptor: COPPER (II) ION, DIMETHYL SULFOXIDE, SULFATE ION, ...
Authors:Antonyuk, S.V, Hossain, A, Agar, J.N, Hasnain, S.S.
Deposit date:2023-01-27
Release date:2023-12-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.665 Å)
Cite:Evaluating protein cross-linking as a therapeutic strategy to stabilize SOD1 variants in a mouse model of familial ALS.
Plos Biol., 22, 2024
3IWT
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BU of 3iwt by Molmil
Structure of hypothetical molybdenum cofactor biosynthesis protein B from Sulfolobus tokodaii
Descriptor: 178aa long hypothetical molybdenum cofactor biosynthesis protein B, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Antonyuk, S.V, Ellis, M.J, Strange, R.W, Hasnain, S.S, Bessho, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-09-03
Release date:2009-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of hypothetical Mo-cofactor biosynthesis protein B (ST2315) from Sulfolobus tokodaii
Acta Crystallogr.,Sect.F, 65, 2009
2JLP
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BU of 2jlp by Molmil
Crystal structure of human extracellular copper-zinc superoxide dismutase.
Descriptor: COPPER (II) ION, EXTRACELLULAR SUPEROXIDE DISMUTASE (CU-ZN), THIOCYANATE ION, ...
Authors:Antonyuk, S.V, Strange, R.W, Marklund, S.L, Hasnain, S.S.
Deposit date:2008-09-14
Release date:2009-03-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structure of Human Extracellular Copper-Zinc Superoxide Dismutase at 1.7 A Resolution: Insights Into Heparin and Collagen Binding.
J.Mol.Biol., 388, 2009
6XY3
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BU of 6xy3 by Molmil
2.0 Angstrom crystal structure of Ca/CaM N53I:RyR2 peptide complex
Descriptor: CALCIUM ION, Calmodulin-1, RyR2 peptide
Authors:Antonyuk, S, Helassa, N.
Deposit date:2020-01-29
Release date:2021-02-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:CPVT-associated calmodulin variants N53I and A102V dysregulate Ca2+ signalling via different mechanisms.
J.Cell.Sci., 135, 2022
6XXX
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BU of 6xxx by Molmil
1.25 Angstrom crystal structure of Ca/CaM A102V:RyR2 peptide complex
Descriptor: CALCIUM ION, Calmodulin-1, LYS-LYS-ALA-VAL-TRP-HIS-LYS-LEU-LEU-SER-LYS-GLN-ARG-LYS-ARG-ALA-VAL-VAL-ALA-CYS-PHE
Authors:Antonyuk, S, Helassa, N.
Deposit date:2020-01-28
Release date:2021-02-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:CPVT-associated calmodulin variants N53I and A102V dysregulate Ca2+ signalling via different mechanisms.
J.Cell.Sci., 135, 2022
6XXF
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BU of 6xxf by Molmil
1.7 Angstrom crystal structure of Ca/CaM:RyR2 peptide complex
Descriptor: CALCIUM ION, Calmodulin-2, RyR2 Peptide
Authors:Antonyuk, S, Helassa, N.
Deposit date:2020-01-27
Release date:2021-02-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:CPVT-associated calmodulin variants N53I and A102V dysregulate Ca2+ signalling via different mechanisms.
J.Cell.Sci., 135, 2022
6R2H
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BU of 6r2h by Molmil
Crystal structure of Apo PinO from Porphyromonas gingivitis
Descriptor: GLYCEROL, HmuY protein
Authors:Antonyuk, S.V, Bielecki, M, Strange, R.W, Capper, M, Olczak, T, Olczak, M.
Deposit date:2019-03-17
Release date:2020-01-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Prevotella intermedia produces two proteins homologous to Porphyromonas gingivalis HmuY but with different heme coordination mode.
Biochem.J., 477, 2020
3IXQ
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BU of 3ixq by Molmil
Structure of ribose 5-phosphate isomerase a from methanocaldococcus jannaschii
Descriptor: ACETATE ION, CHLORIDE ION, Ribose-5-phosphate isomerase A, ...
Authors:Antonyuk, S.V, Ellis, M.J, Strange, R.W, Hasnain, S.S, Bessho, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-09-04
Release date:2009-10-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The structure of an archaeal ribose-5-phosphate isomerase from Methanocaldococcus jannaschii (MJ1603).
Acta Crystallogr.,Sect.F, 65, 2009
3ZK4
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BU of 3zk4 by Molmil
Structure of purple acid phosphatase PPD1 isolated from yellow lupin (Lupinus luteus) seeds
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DIPHOSPHONUCLEOTIDE PHOSPHATASE 1, ...
Authors:Antonyuk, S.V, Strange, R.W.
Deposit date:2013-01-21
Release date:2014-01-29
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Structure of a Purple Acid Phosphatase Involved in Plant Growth and Pathogen Defence Exhibits a Novel Immunoglobulin-Like Fold
Iucrj, 1, 2014
3ZWI
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BU of 3zwi by Molmil
RECOMBINANT NATIVE CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: CARBON MONOOXIDE BOUND AT 1.25 A:UNRESTRAINT REFINEMENT
Descriptor: ASCORBIC ACID, CARBON MONOXIDE, CYTOCHROME C', ...
Authors:Antonyuk, S, Rustage, N, Eady, R.R, Hasnain, S.S.
Deposit date:2011-07-31
Release date:2012-08-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Carbon Monoxide Poisoning is Prevented by the Energy Costs of Conformational Changes in Gas-Binding Haemproteins.
Proc.Natl.Acad.Sci.USA, 108, 2011
6EU8
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BU of 6eu8 by Molmil
Crystal structure of Tannerella forsythia Apo HmuY analog (TFO)
Descriptor: MALONATE ION, Putative heme binding protein
Authors:Antonyuk, S.V, Strange, R.W.
Deposit date:2017-10-29
Release date:2018-10-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Tannerella forsythiaTfo belongs toPorphyromonas gingivalisHmuY-like family of proteins but differs in heme-binding properties.
Biosci. Rep., 38, 2018
1OBD
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BU of 1obd by Molmil
SAICAR-synthase complexed with ATP
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Antonyuk, S.V, Grebenko, A.I, Levdikov, V.M, Urusova, D.V, Melik-Adamyan, W.R, Lamzin, V.S, Wilson, K.
Deposit date:2003-01-30
Release date:2003-03-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:X-Ray Structure of Saicar-Synthase Complexed with ATP
Kristallografiya, 46, 2001
1OBG
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BU of 1obg by Molmil
SAICAR-synthase complexed with ATP
Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, PHOSPHORIBOSYLAMIDOIMIDAZOLE- SUCCINOCARBOXAMIDE SYNTHASE, ...
Authors:Antonyuk, S.V, Grebenko, A.I, Levdikov, V.M, Urusova, D.V, Melik-Adamyan, W.R, Lamzin, V.S, Wilson, K.
Deposit date:2003-01-30
Release date:2003-03-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:X-Ray Structure of Saicar-Synthase Complexed with ATP
Kristallografiya, 46, 2001
1OBF
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BU of 1obf by Molmil
The crystal structure of Glyceraldehyde 3-phosphate Dehydrogenase from Alcaligenes xylosoxidans at 1.7A resolution.
Descriptor: GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, POTASSIUM ION, SULFATE ION, ...
Authors:Antonyuk, S.V, Eady, R.R, Strange, R.W, Hasnain, S.S.
Deposit date:2003-01-30
Release date:2003-06-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structure of Glyceraldehyde 3-Phosphate Dehydrogenase from Alcaligenes Xylosoxidans at 1.7 A Resolution
Acta Crystallogr.,Sect.D, 59, 2003
6QPU
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BU of 6qpu by Molmil
Crystal structure of as isolated synthetic core domain of nitrite reductase from Ralstonia pickettii (residues 1-331)
Descriptor: CHLORIDE ION, COPPER (II) ION, Copper-containing nitrite reductase, ...
Authors:Antonyuk, S.V, Hedison, T.M, Eady, R.R, Hasnain, S.S, Scrutton, N.S.
Deposit date:2019-02-15
Release date:2019-11-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Unexpected Roles of a Tether Harboring a Tyrosine Gatekeeper Residue in Modular Nitrite Reductase Catalysis.
Acs Catalysis, 9, 2019
6QPT
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BU of 6qpt by Molmil
Crystal structure of nitrite bound synthetic core domain of nitrite reductase from Ralstonia pickettii (residues 1-331)
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, NITRITE ION, ...
Authors:Antonyuk, S.V, Hedison, T.M, Eady, R.R, Hasnain, S.S, Scrutton, N.S.
Deposit date:2019-02-15
Release date:2019-11-06
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Unexpected Roles of a Tether Harboring a Tyrosine Gatekeeper Residue in Modular Nitrite Reductase Catalysis.
Acs Catalysis, 9, 2019

226707

数据于2024-10-30公开中

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