Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 4175 件

6LWL
DownloadVisualize
BU of 6lwl by Molmil
Crystal structure of human NEIL1(R242) bound to duplex DNA containing 2'-fluoro-2'-deoxy-5,6-dihydrouridine
分子名称: DNA (5'-D(*CP*GP*TP*CP*CP*AP*(FDU)P*GP*TP*CP*TP*AP*C)-3'), DNA (5'-D(*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*G)-3'), Endonuclease 8-like 1, ...
著者Liu, M.H, Zhang, J, Zhu, C.X, Zhang, X.X, Gao, Y.Q, Yi, C.Q.
登録日2020-02-07
公開日2021-06-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献DNA repair glycosylase hNEIL1 triages damaged bases via competing interaction modes.
Nat Commun, 12, 2021
6LWQ
DownloadVisualize
BU of 6lwq by Molmil
Crystal structure of human NEIL1(R242) bound to duplex DNA containing a C:T mismatch
分子名称: DNA (5'-D(*CP*GP*TP*CP*CP*AP*TP*GP*TP*CP*TP*AP*C)-3'), DNA (5'-D(*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*G)-3'), Endonuclease 8-like 1
著者Liu, M.H, Zhang, J, Zhu, C.X, Zhang, X.X, Gao, Y.Q, Yi, C.Q.
登録日2020-02-07
公開日2021-06-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献DNA repair glycosylase hNEIL1 triages damaged bases via competing interaction modes.
Nat Commun, 12, 2021
6LWR
DownloadVisualize
BU of 6lwr by Molmil
Crystal structure of human NEIL1(K242) bound to duplex DNA containing a cleaved C:T mismatch
分子名称: DNA (5'-D(*CP*GP*TP*CP*CP*(PDA))-3'), DNA (5'-D(*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*G)-3'), Endonuclease 8-like 1
著者Liu, M.H, Zhang, J, Zhu, C.X, Zhang, X.X, Gao, Y.Q, Yi, C.Q.
登録日2020-02-07
公開日2021-06-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献DNA repair glycosylase hNEIL1 triages damaged bases via competing interaction modes.
Nat Commun, 12, 2021
6BA6
DownloadVisualize
BU of 6ba6 by Molmil
Solution structure of Rap1b/talin complex
分子名称: Ras-related protein Rap-1b, Talin-1
著者Zhu, L, Yang, J, Qin, J.
登録日2017-10-12
公開日2017-12-06
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of Rap1b bound to talin reveals a pathway for triggering integrin activation.
Nat Commun, 8, 2017
8H05
DownloadVisualize
BU of 8h05 by Molmil
Minor polymorph in alpha-synuclein fibril seeded by cerebrospinal fluid from a postmortal Parkinson's disease patient
分子名称: Alpha-synuclein
著者Fan, Y, Sun, Y.P, Wang, J, Liu, C.
登録日2022-09-28
公開日2022-11-30
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Conformational change of alpha-synuclein fibrils in cerebrospinal fluid from different clinical phases of Parkinson's disease.
Structure, 31, 2023
8H03
DownloadVisualize
BU of 8h03 by Molmil
Major polymorph in alpha-synuclein fibril seeded by cerebrospinal fluid from a preclinical Parkinson's disease patient
分子名称: Alpha-synuclein
著者Fan, Y, Sun, Y.P, Wang, J, Liu, C.
登録日2022-09-28
公開日2022-11-30
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Conformational change of alpha-synuclein fibrils in cerebrospinal fluid from different clinical phases of Parkinson's disease.
Structure, 31, 2023
7ELF
DownloadVisualize
BU of 7elf by Molmil
Nitrilase-Like Protein Nit2 from Kluyve-romyces lactis
分子名称: KLLA0E15247p
著者Jin, C.W, Chang, J.H.
登録日2021-04-10
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of Nitrilase-Like Protein Nit2 from Kluyveromyces lactis.
Crystals, 11, 2021
8JMM
DownloadVisualize
BU of 8jmm by Molmil
Structure of XBB spike protein (S) dimer-trimer in complex with bispecific antibody G7-Fc at 3.75 Angstroms resolution.
分子名称: 7F3 Fv, GW01 Fv, Spike glycoprotein
著者Hao, A, Mao, Q, Chen, Z, Huang, J, Sun, L.
登録日2023-06-05
公開日2024-06-12
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Structure of XBB spike protein (S) dimer-trimer in complex with bispecific antibody G7-Fc at 3.75 Angstroms resolution.
To Be Published
8H04
DownloadVisualize
BU of 8h04 by Molmil
Major polymorph in alpha-synuclein fibril seeded by cerebrospinal fluid from a postmortal Parkinson's disease patient
分子名称: Alpha-synuclein
著者Fan, Y, Sun, Y.P, Wang, J, Liu, C.
登録日2022-09-28
公開日2022-11-30
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Conformational change of alpha-synuclein fibrils in cerebrospinal fluid from different clinical phases of Parkinson's disease.
Structure, 31, 2023
6GR7
DownloadVisualize
BU of 6gr7 by Molmil
Crystal Structure Of Human Transthyretin in complex with 2,4,5-trichlorophenoxyacetic acid (2,4,5-T)
分子名称: 2-[2,4,5-tris(chloranyl)phenoxy]ethanoic acid, Transthyretin
著者Grundstrom, C, Zhang, J, Olofsson, A, Andersson, P.L, Sauer-Eriksson, A.E.
登録日2018-06-09
公開日2018-07-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Interspecies Variation between Fish and Human Transthyretins in Their Binding of Thyroid-Disrupting Chemicals.
Environ. Sci. Technol., 52, 2018
5JIQ
DownloadVisualize
BU of 5jiq by Molmil
Crystal Structure of Human Transthyretin in Complex with 2,2',4,4'-tetrahydroxybenzophenone (BP2)
分子名称: GLYCEROL, SODIUM ION, Transthyretin, ...
著者Begum, A, Zhang, J, Olofsson, A, Andersson, P, Sauer-Eriksson, A.E.
登録日2016-04-22
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure-Based Virtual Screening Protocol for in Silico Identification of Potential Thyroid Disrupting Chemicals Targeting Transthyretin.
Environ. Sci. Technol., 50, 2016
4GYW
DownloadVisualize
BU of 4gyw by Molmil
Crystal structure of human O-GlcNAc Transferase in complex with UDP and a glycopeptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Casein kinase II subunit alpha, SULFATE ION, ...
著者Lazarus, M.B, Jiang, J, Gloster, T.M, Zandberg, W.F, Vocadlo, D.J, Walker, S.
登録日2012-09-05
公開日2012-10-31
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural snapshots of the reaction coordinate for O-GlcNAc transferase.
Nat.Chem.Biol., 8, 2012
5JCD
DownloadVisualize
BU of 5jcd by Molmil
Crystal structure of OsCEBiP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitin elicitor-binding protein
著者Chai, J.J, Liu, S.M, Wang, J.Z.
登録日2016-04-15
公開日2017-02-22
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular Mechanism for Fungal Cell Wall Recognition by Rice Chitin Receptor OsCEBiP
Structure, 24, 2016
7E6H
DownloadVisualize
BU of 7e6h by Molmil
glucose-6-phosphate dehydrogenase from Kluyveromyces lactis
分子名称: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glucose-6-phosphate 1-dehydrogenase
著者Ha, V.H, Chang, J.H.
登録日2021-02-22
公開日2021-04-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for substrate recognition of glucose-6-phosphate dehydrogenase from Kluyveromyces lactis.
Biochem.Biophys.Res.Commun., 553, 2021
7E6I
DownloadVisualize
BU of 7e6i by Molmil
Glucose-6-phosphate dehydrogenase in complex with its substrate glucose-6-phosphate
分子名称: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-O-phosphono-beta-D-glucopyranose, ...
著者Vu, H.H, Chang, J.H.
登録日2021-02-22
公開日2021-04-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structural basis for substrate recognition of glucose-6-phosphate dehydrogenase from Kluyveromyces lactis.
Biochem.Biophys.Res.Commun., 553, 2021
5I0A
DownloadVisualize
BU of 5i0a by Molmil
RecA mini intein in complex with cisplatin
分子名称: 3,3',3''-phosphanetriyltripropanoic acid, Cisplatin, Intein, ...
著者Li, Z, Zhang, J, Li, H.M.
登録日2016-02-03
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural insights into protein splicing inhibition by platinum therapeutics as potential anti-microbials
To be published
4IXL
DownloadVisualize
BU of 4ixl by Molmil
Crystal structure of endo-beta-1,4-xylanase from the alkaliphilic Bacillus sp. SN5
分子名称: SULFATE ION, xylanase
著者Bai, W.Q, Xue, Y.F, Huang, J.X, Zhou, C, Guo, R.T, Ma, Y.H.
登録日2013-01-26
公開日2014-02-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Structure Analysis of Alkaline xylanase from Alkaliphilic Bacillus sp. SN5 Implications for pH-dependent enzyme activity
To be Published
8ZH5
DownloadVisualize
BU of 8zh5 by Molmil
The Crystal Structure of the ROCK1 from Biortus.
分子名称: Rho-associated protein kinase 1
著者Wang, F, Cheng, W, Yuan, Z, Lin, D, Wang, J.
登録日2024-05-10
公開日2024-06-26
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献The Crystal Structure of the ROCK1 from Biortus.
To Be Published
4J7N
DownloadVisualize
BU of 4j7n by Molmil
Crystal structure of mouse DXO in complex with M7GPPPG cap
分子名称: 1,2-ETHANEDIOL, 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, 9-METHYLGUANINE, ...
著者Kilic, T, Chang, J.H, Tong, L.
登録日2013-02-13
公開日2013-03-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A mammalian pre-mRNA 5' end capping quality control mechanism and an unexpected link of capping to pre-mRNA processing.
Mol.Cell, 50, 2013
5WXH
DownloadVisualize
BU of 5wxh by Molmil
Crystal structure of TAF3 PHD finger bound to H3K4me3
分子名称: Histone H3K4me3, Transcription initiation factor TFIID subunit 3, ZINC ION
著者Zhao, S, Huang, J, Li, H.
登録日2017-01-07
公開日2017-08-16
最終更新日2017-09-13
実験手法X-RAY DIFFRACTION (1.297 Å)
主引用文献Kinetic and high-throughput profiling of epigenetic interactions by 3D-carbene chip-based surface plasmon resonance imaging technology
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8VU0
DownloadVisualize
BU of 8vu0 by Molmil
Co-crystal structure of Aquifex aeolicus Trbp111 in complex with E. coli tRNA-Ile
分子名称: Methionyl-tRNA synthetase beta subunit, RNA (76-MER)
著者Umuhire Juru, A, Zhang, J.
登録日2024-01-27
公開日2024-08-07
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Structural basis of tRNA recognition by the widespread OB fold.
Nat Commun, 15, 2024
6FV6
DownloadVisualize
BU of 6fv6 by Molmil
Monomer structure of the MATE family multidrug resistance transporter Aq_128 from Aquifex aeolicus in the outward-facing state
分子名称: Aq128
著者Zhao, J, Safarian, S, Thielmann, Y, Xie, H, Wang, J, Michel, H.
登録日2018-03-01
公開日2019-03-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Monomer structure of Aq128 in the outward-facing state
To Be Published
6FV8
DownloadVisualize
BU of 6fv8 by Molmil
Dimer structure of the MATE family multidrug resistance transporter Aq_128 from Aquifex aeolicus in the outward-facing state
分子名称: Aq128
著者Zhao, J, Safarian, S, Thielmann, Y, Xie, H, Wang, J, Michel, H.
登録日2018-03-01
公開日2019-03-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Dimer structure of the MATE family multidrug resistance transporter Aq128 in the outward-facing state
To Be Published
4G27
DownloadVisualize
BU of 4g27 by Molmil
Calcium-calmodulin complexed with the calmodulin binding domain from a small conductance potassium channel splice variant and phenylurea
分子名称: 1-phenylurea, CALCIUM ION, Calmodulin, ...
著者Zhang, M, Pascal, J.M, Zhang, J.-F.
登録日2012-07-11
公開日2012-09-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Identification of the functional binding pocket for compounds targeting small-conductance Ca(2+)-activated potassium channels.
Nat Commun, 3, 2012
7XV3
DownloadVisualize
BU of 7xv3 by Molmil
Cryo-EM structure of LPS-bound GPR174 in complex with Gs protein
分子名称: (2~{S})-2-$l^{4}-azanyl-3-[[(2~{R})-3-octadecanoyloxy-2-oxidanyl-propoxy]-oxidanyl-oxidanylidene-$l^{6}-phosphanyl]oxy-propanoic acid, Engineered G protein subunit S (mini-Gs), Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者He, Y, Liang, J.
登録日2022-05-20
公開日2023-02-15
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Structural basis of lysophosphatidylserine receptor GPR174 ligand recognition and activation.
Nat Commun, 14, 2023

227344

件を2024-11-13に公開中

PDB statisticsPDBj update infoContact PDBjnumon