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PDB: 4046 results

1UW0
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Solution structure of the zinc-finger domain from DNA ligase IIIa
Descriptor: DNA LIGASE III, ZINC ION
Authors:Kulczyk, A.W, Yang, J.-C, Neuhaus, D.
Deposit date:2004-01-27
Release date:2004-08-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure and DNA Binding of the Zinc-Finger Domain from DNA Ligase Iiialpha
J.Mol.Biol., 341, 2004
2B3V
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Spermine spermidine acetyltransferase in complex with acetylcoa, K26R mutant
Descriptor: ACETYL COENZYME *A, Diamine acetyltransferase 1
Authors:Bewley, M.C, Graziano, V, Jiang, J.S, Matz, E, Studier, F.W, Pegg, A.P, Coleman, C.S, Flanagan, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-09-21
Release date:2006-01-17
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures of wild-type and mutant human spermidine/spermine N1-acetyltransferase, a potential therapeutic drug target.
Proc.Natl.Acad.Sci.USA, 103, 2006
2B4B
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SSAT+COA+BE-3-3-3, K26R mutant
Descriptor: COENZYME A, Diamine acetyltransferase 1, N-ETHYL-N-[3-(PROPYLAMINO)PROPYL]PROPANE-1,3-DIAMINE
Authors:Bewley, M.C, Graziano, V, Jiang, J.S, Matz, E, Studier, F.W, Pegg, A.P, Coleman, C.S, Flanagan, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-09-23
Release date:2006-01-17
Last modified:2023-05-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of wild-type and mutant human spermidine/spermine N1-acetyltransferase, a potential therapeutic drug target
Proc.Natl.Acad.Sci.Usa, 103, 2006
2VKM
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Crystal structure of GRL-8234 bound to BACE (Beta-secretase)
Descriptor: BETA-SECRETASE 1, N-{(1S,2R)-1-benzyl-2-hydroxy-3-[(3-methoxybenzyl)amino]propyl}-5-[methyl(methylsulfonyl)amino]-N'-[(1R)-1-phenylethyl]benzene-1,3-dicarboxamide
Authors:Hong, L, Tang, J, Ghosh, A.K.
Deposit date:2007-12-04
Release date:2008-12-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Potent Memapsin 2 (Beta-Secretase) Inhibitors: Design, Synthesis, Protein-Ligand X-Ray Structure, and in Vivo Evaluation.
Bioorg.Med.Chem.Lett., 18, 2008
1DU2
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SOLUTION STRUCTURE OF THE THETA SUBUNIT OF DNA POLYMERASE III
Descriptor: DNA POLYMERASE III
Authors:Keniry, M.A, Berthon, H.A, Yang, J.-Y, Miles, C.S, Dixon, N.E.
Deposit date:2000-01-13
Release date:2000-05-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR solution structure of the theta subunit of DNA polymerase III from Escherichia coli.
Protein Sci., 9, 2000
3BQJ
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VA387 polypeptide
Descriptor: va387 polypeptide
Authors:Bu, W, Mamedova, A, Tan, M, Jiang, J, Hegde, R.
Deposit date:2007-12-20
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for the receptor binding specificity of Norwalk virus.
J.Virol., 82, 2008
2XQU
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Microscopic rotary mechanism of ion translocation in the Fo complex of ATP synthases
Descriptor: ATP SYNTHASE C CHAIN, CYMAL-4
Authors:Pogoryelov, D, Krah, A, Langer, J, Yildiz, O, Faraldo-Gomez, J.D, Meier, T.
Deposit date:2010-09-07
Release date:2010-10-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Microscopic Rotary Mechanism of Ion Translocation in the Fo Complex of ATP Synthases
Nat.Chem.Biol., 6, 2010
1SJW
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Structure of polyketide cyclase SnoaL
Descriptor: METHYL 5,7-DIHYDROXY-2-METHYL-4,6,11-TRIOXO-3,4,6,11-TETRAHYDROTETRACENE-1-CARBOXYLATE, nogalonic acid methyl ester cyclase
Authors:Sultana, A, Kallio, P, Jansson, A, Wang, J.S, Neimi, J, Mantsala, P, Schneider, G, Structural Proteomics in Europe (SPINE)
Deposit date:2004-03-04
Release date:2004-04-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of the polyketide cyclase SnoaL reveals a novel mechanism for enzymatic aldol condensation.
Embo J., 23, 2004
1QU3
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INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN
Descriptor: ISOLEUCYL-TRNA, ISOLEUCYL-TRNA SYNTHETASE, MUPIROCIN, ...
Authors:Silvian, L.F, Wang, J, Steitz, T.A.
Deposit date:1999-07-06
Release date:1999-08-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Insights into editing from an ile-tRNA synthetase structure with tRNAile and mupirocin.
Science, 285, 1999
1JE9
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NMR SOLUTION STRUCTURE OF NT2
Descriptor: SHORT NEUROTOXIN II
Authors:Cheng, Y, Wang, W, Wang, J.
Deposit date:2001-06-16
Release date:2001-07-04
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure-function relationship of three neurotoxins from the venom of Naja kaouthia: a comparison between the NMR-derived structure of NT2 with its homologues, NT1 and NT3
BIOCHIM.BIOPHYS.ACTA, 1594, 2002
2AFJ
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SPRY domain-containing SOCS box protein 2 (SSB-2)
Descriptor: gene rich cluster, C9 gene
Authors:Masters, S.L, Yao, S, Willson, T.A, Zhang, J.G, Palmer, K.R, Smith, B.J, Babon, J.J, Nicola, N.A, Norton, R.S, Nicholson, S.E.
Deposit date:2005-07-26
Release date:2006-01-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The SPRY domain of SSB-2 adopts a novel fold that presents conserved Par-4-binding residues
Nat.Struct.Mol.Biol., 13, 2006
1ZXQ
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THE CRYSTAL STRUCTURE OF ICAM-2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, INTERCELLULAR ADHESION MOLECULE-2
Authors:Casasnovas, J.M, Springer, T.A, Harrison, S.C, Wang, J.-H.
Deposit date:1997-03-04
Release date:1997-09-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of ICAM-2 reveals a distinctive integrin recognition surface.
Nature, 387, 1997
1FZD
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STRUCTURE OF RECOMBINANT ALPHAEC DOMAIN FROM HUMAN FIBRINOGEN-420
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Spraggon, G, Applegate, D, Everse, S.J, Zhang, J.-Z, Veerapandian, L, Redman, C, Doolittle, R.F, Grieninger, G.
Deposit date:1998-06-22
Release date:1998-08-19
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a recombinant alphaEC domain from human fibrinogen-420.
Proc.Natl.Acad.Sci.USA, 95, 1998
2XQT
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Microscopic rotary mechanism of ion translocation in the Fo complex of ATP synthases
Descriptor: ATP SYNTHASE C CHAIN, CYMAL-4, DICYCLOHEXYLUREA
Authors:Pogoryelov, D, Krah, A, Langer, J, Yildiz, O, Faraldo-Gomez, J.D, Meier, T.
Deposit date:2010-09-07
Release date:2010-10-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Microscopic Rotary Mechanism of Ion Translocation in the Fo Complex of ATP Synthases
Nat.Chem.Biol., 6, 2010
1FXP
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AQUIFEX AEOLICUS KDO8P SYNTHASE IN COMPLEX WITH CADMIUM
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, CADMIUM ION, PHOSPHATE ION
Authors:Duewel, H.S, Radaev, S, Wang, J, Woodard, R.W, Gatti, D.L.
Deposit date:2000-09-26
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Substrate and metal complexes of 3-deoxy-D-manno-octulosonate-8-phosphate synthase from Aquifex aeolicus at 1.9-A resolution. Implications for the condensation mechanism.
J.Biol.Chem., 276, 2001
2KHS
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Solution structure of SNase121:SNase(111-143) complex
Descriptor: Nuclease, Thermonuclease
Authors:Geng, Y, Feng, Y, Xie, T, Shan, L, Wang, J.
Deposit date:2009-04-10
Release date:2009-10-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The native-like interactions between SNase121 and SNase(111-143) fragments induce the recovery of their native-like structures and the ability to degrade DNA.
Biochemistry, 48, 2009
2XQS
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Microscopic rotary mechanism of ion translocation in the Fo complex of ATP synthases
Descriptor: ATP SYNTHASE C CHAIN, CYMAL-4
Authors:Pogoryelov, D, Krah, A, Langer, J, Yildiz, O, Faraldo-Gomez, J.D, Meier, T.
Deposit date:2010-09-07
Release date:2010-10-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Microscopic Rotary Mechanism of Ion Translocation in the Fo Complex of ATP Synthases
Nat.Chem.Biol., 6, 2010
1ZA4
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Crystal Structure of the Thrombospondin-1 N-terminal Domain in Complex with Arixtra
Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, SULFATE ION, Thrombospondin 1
Authors:Tan, K, Wang, J.H, Lawler, J.
Deposit date:2005-04-05
Release date:2006-01-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Structures of the Thrombospondin-1 N-terminal Domain and its Complex with a Synthetic Pentameric Heparin
Structure, 14, 2006
1ZJI
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Aquifex aeolicus KDO8PS R106G mutant in complex with 2PGA and R5P
Descriptor: 2-PHOSPHOGLYCERIC ACID, 2-dehydro-3-deoxyphosphooctonate aldolase, CADMIUM ION, ...
Authors:Xu, X, Kona, F, Wang, J, Lu, J, Stemmler, T, Gatti, D.L.
Deposit date:2005-04-28
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Catalytic and Conformational Cycle of Aquifex aeolicus KDO8P Synthase: Role of the L7 Loop
Biochemistry, 44, 2005
1QRZ
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CATALYTIC DOMAIN OF PLASMINOGEN
Descriptor: PLASMINOGEN
Authors:Peisach, E, Wang, J, de los Santos, T, Reich, E, Ringe, D.
Deposit date:1999-06-16
Release date:1999-10-14
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the proenzyme domain of plasminogen.
Biochemistry, 38, 1999
1FWN
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AQUIFEX AEOLICUS KDO8P SYNTHASE IN COMPLEX WITH PEP
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, PHOSPHATE ION, PHOSPHOENOLPYRUVATE
Authors:Duewel, H.S, Radaev, S, Wang, J, Woodard, R.W, Gatti, D.L.
Deposit date:2000-09-23
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Substrate and metal complexes of 3-deoxy-D-manno-octulosonate-8-phosphate synthase from Aquifex aeolicus at 1.9-A resolution. Implications for the condensation mechanism.
J.Biol.Chem., 276, 2001
2HR9
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Solution structure of human translationally controlled tumor protein
Descriptor: Translationally-controlled tumor protein
Authors:Feng, Y, Liu, D, Yao, H, Wang, J.
Deposit date:2006-07-20
Release date:2006-08-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure and mapping of a very weak calcium-binding site of human translationally controlled tumor protein by NMR
Arch.Biochem.Biophys., 48, 2007
1ECL
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AMINO TERMINAL 67KDA DOMAIN OF ESCHERICHIA COLI DNA TOPOISOMERASE I (RESIDUES 2-590 OF MATURE PROTEIN) CLONING ARTIFACT ADDS TWO RESIDUES TO THE AMINO-TERMINUS WHICH WERE NOT OBSERVED IN THE EXPERIMENTAL ELECTRON DENSITY (GLY-2, SER-1).
Descriptor: ESCHERICHIA COLI TOPOISOMERASE I
Authors:Lima, C.D, Wang, J.C, Mondragon, A.
Deposit date:1995-05-05
Release date:1995-07-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Three-dimensional structure of the 67K N-terminal fragment of E. coli DNA topoisomerase I.
Nature, 367, 1994
1GZN
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Structure of PKB kinase domain
Descriptor: RAC-BETA SERINE/THREONINE PROTEIN KINASE
Authors:Barford, D, Yang, J, Hemmings, B.A.
Deposit date:2002-05-24
Release date:2003-05-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Mechanism for the Regulation of Protein Kinase B/Akt by Hydrophobic Motif Phosphorylation
Mol.Cell, 9, 2002
1GZO
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Structure of protein kinase B unphosphorylated
Descriptor: RAC-BETA SERINE/THREONINE PROTEIN KINASE
Authors:Barford, D, Yang, J, Hemmings, B.A.
Deposit date:2002-05-24
Release date:2003-05-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Molecular Mechanism for the Regulation of Protein Kinase B/Akt by Hydrophobic Motif Phosphorylation
Mol.Cell, 9, 2002

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