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PDB: 56 results

1S9H
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BU of 1s9h by Molmil
Crystal Structure of Adeno-associated virus Type 2 Rep40
Descriptor: Rep 40 protein
Authors:James, J.A, Escalante, C.R, Yoon-Robarts, M, Edwards, T.A, Linden, R.M, Aggarwal, A.K.
Deposit date:2004-02-04
Release date:2004-05-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of the SF3 Helicase from Adeno-Associated Virus Type 2
Structure, 11, 2003
5J7J
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BU of 5j7j by Molmil
NMR Derived Structure of Ca2+ Calmodulin bound to Phosphorylated PSD-95
Descriptor: CALCIUM ION, Calmodulin, Disks large homolog 4
Authors:Turner, M.L, Ames, J.B, Anderson, D.E.
Deposit date:2016-04-06
Release date:2017-10-25
Last modified:2019-11-27
Method:SOLUTION NMR
Cite:Ca2+/calmodulin binding to PSD-95 mediates homeostatic synaptic scaling down.
Embo J., 37, 2018
6DRF
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BU of 6drf by Molmil
Structure of human Retinal Degeneration 3(RD3) Protein
Descriptor: Protein RD3
Authors:Yu, Q, Lim, S, Peshenko, I, Cudia, D, Dizhoor, A.M, Ames, J.B.
Deposit date:2018-06-11
Release date:2019-02-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Retinal degeneration 3 (RD3) protein, a retinal guanylyl cyclase regulator, forms a monomeric and elongated four-helix bundle.
J. Biol. Chem., 294, 2019
8DGH
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BU of 8dgh by Molmil
NMR Structure of calmodulin bound to C-terminal site in the beta-subunit of cyclic nucleotide-gated channel
Descriptor: Calmodulin-1, Cyclic nucleotide-gated cation channel beta-1
Authors:Bej, A, Ames, J.B.
Deposit date:2022-06-23
Release date:2022-12-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structures of Calmodulin Bound to Two Separate Regulatory Sites in the Retinal Cyclic Nucleotide-Gated Channel.
Biochemistry, 61, 2022
8DGK
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BU of 8dgk by Molmil
NMR structure of calmodulin bound to N-terminal site in the beta-subunit of cyclic nucleotide-gated channel
Descriptor: Calmodulin-1, Cyclic nucleotide-gated cation channel beta-1
Authors:Bej, A, Ames, J.B.
Deposit date:2022-06-23
Release date:2022-12-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structures of Calmodulin Bound to Two Separate Regulatory Sites in the Retinal Cyclic Nucleotide-Gated Channel.
Biochemistry, 61, 2022
7P7W
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BU of 7p7w by Molmil
N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine and ADP
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
Deposit date:2021-07-20
Release date:2022-08-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P7I
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BU of 7p7i by Molmil
Native structure of N-acetylglucosamine kinase from Plesiomonas shigelloides
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
Authors:Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
Deposit date:2021-07-19
Release date:2022-07-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P9L
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BU of 7p9l by Molmil
N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine-6-phosphate
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-6-O-phosphono-beta-D-glucopyranose, ...
Authors:Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
Deposit date:2021-07-27
Release date:2022-08-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P9P
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BU of 7p9p by Molmil
N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine and AMP-PNP inhibitor
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
Deposit date:2021-07-27
Release date:2022-08-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7PA1
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BU of 7pa1 by Molmil
Structure of N-acetylglucosamine kinase from Plesiomonas shigelloides in complex with AMP-PNP in the absence of N-acetylglucoseamine substrate
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
Deposit date:2021-07-28
Release date:2022-08-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P9Y
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BU of 7p9y by Molmil
N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, ...
Authors:Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
Deposit date:2021-07-28
Release date:2022-08-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
8VSX
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BU of 8vsx by Molmil
NMR Structure of GCAP5 R22A
Descriptor: Guanylyl cyclase-activating protein 1
Authors:Cudia, D.L, Ames, J.B.
Deposit date:2024-01-24
Release date:2024-05-08
Last modified:2024-06-05
Method:SOLUTION NMR
Cite:NMR Structure of Retinal Guanylate Cyclase Activating Protein 5 (GCAP5) with R22A Mutation That Abolishes Dimerization and Enhances Cyclase Activation.
Biochemistry, 63, 2024
7KL5
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BU of 7kl5 by Molmil
Structure of Calmodulin Bound to the Cardiac Ryanodine Receptor (RyR2) at Residues: Phe4246 to Val4271
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Calmodulin-1, ...
Authors:Fisher, A.J, Ames, J.B, Yu, Q.
Deposit date:2020-10-29
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Crystal Structure of Calmodulin Bound to the Cardiac Ryanodine Receptor (RyR2) at Residues Phe4246-Val4271 Reveals a Fifth Calcium Binding Site.
Biochemistry, 60, 2021
6C0A
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BU of 6c0a by Molmil
Actinin-1 EF-Hand bound to the Cav1.2 IQ Motif
Descriptor: Alpha-actinin-1, Voltage-dependent L-type calcium channel subunit alpha-1C
Authors:Turner, M.L, Ames, J.B.
Deposit date:2017-12-28
Release date:2019-01-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis of the Localization and Activation of Neuronal L-type Ca2+ Channels by a-Actinin1 and Calmodulin
To be Published
6BHO
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BU of 6bho by Molmil
Green Light-Absorbing State of NpR6012g4, a Red/Green Cyanobacteriochrome
Descriptor: Methyl-accepting chemotaxis sensory transducer with phytochrome sensor, PHYCOCYANOBILIN
Authors:Lim, S, Yu, Q, Rockwell, N.C, Martin, S.S, Lagarias, J.C, Ames, J.B.
Deposit date:2017-10-31
Release date:2018-04-18
Last modified:2019-12-04
Method:SOLUTION NMR
Cite:Correlating structural and photochemical heterogeneity in cyanobacteriochrome NpR6012g4.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BHN
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BU of 6bhn by Molmil
Red Light-Absorbing State of NpR6012g4, a Red/Green Cyanobacteriochrome
Descriptor: Methyl-accepting chemotaxis sensory transducer with phytochrome sensor, PHYCOCYANOBILIN
Authors:Yu, Q, Lim, S, Rockwell, N.C, Martin, S.S, Lagarias, J.C, Ames, J.B.
Deposit date:2017-10-31
Release date:2018-04-18
Last modified:2019-12-04
Method:SOLUTION NMR
Cite:Correlating structural and photochemical heterogeneity in cyanobacteriochrome NpR6012g4.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2MES
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BU of 2mes by Molmil
Backbone 1H, 13C, 15N resonance assignments of calcium-bound calmodulin in complex with PSD95 N-terminal peptide
Descriptor: CALCIUM ION, Calmodulin, Disks large homolog 4
Authors:Zhang, Y, Ames, J.B.
Deposit date:2013-09-26
Release date:2014-12-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Capping of the N-terminus of PSD-95 by calmodulin triggers its postsynaptic release.
Embo J., 33, 2014
2NA0
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BU of 2na0 by Molmil
NMR structure of Guanylyl Cyclase Activator Protein 1 (GCAP1) mutant V77E in a Ca2+-free/Mg2+-bound Activator State
Descriptor: Guanylyl cyclase-activating protein 1
Authors:Lim, S, Ames, J.B.
Deposit date:2015-12-16
Release date:2015-12-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of Guanylyl Cyclase Activator Protein 1 (GCAP1) Mutant V77E in a Ca2+-free/Mg2+-bound Activator State.
J.Biol.Chem., 291, 2016
5T7C
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BU of 5t7c by Molmil
Solution structure of calcium free, myristoylated visinin-like protein 3
Descriptor: Hippocalcin-like protein 1
Authors:Lim, S, Ames, J.B.
Deposit date:2016-09-02
Release date:2017-07-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and Calcium Binding Properties of a Neuronal Calcium-Myristoyl Switch Protein, Visinin-Like Protein 3.
PLoS ONE, 11, 2016
5T0X
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BU of 5t0x by Molmil
Solution NMR-derived structure of calmodulin bound with ER alpha peptides
Descriptor: CALCIUM ION, Calmodulin, Estrogen receptor peptide
Authors:Zhang, Y, Ames, J.B.
Deposit date:2016-08-16
Release date:2017-02-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution NMR-derived structure of calmodulin bound with ER alpha peptides
To Be Published
6CTB
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BU of 6ctb by Molmil
Apo-Calmodulin Bound to Calcium Voltage Gated Channel 1.2 IQ-Motif
Descriptor: Calmodulin-1, Voltage-dependent L-type calcium channel subunit alpha-1C
Authors:Turner, M.L, Anderson, D.E, Ames, J.B.
Deposit date:2018-03-22
Release date:2019-09-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:apo-Calmodulin Bound to Calcium Voltage Gated Channel 1.2 IQ-Motif
To Be Published
1IKU
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BU of 1iku by Molmil
myristoylated recoverin in the calcium-free state, NMR, 22 structures
Descriptor: MYRISTIC ACID, RECOVERIN
Authors:Tanaka, T, Ames, J.B, Harvey, T.S, Stryer, L, Ikura, M.
Deposit date:1996-01-18
Release date:1996-07-11
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Sequestration of the membrane-targeting myristoyl group of recoverin in the calcium-free state.
Nature, 376, 1995
3S44
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BU of 3s44 by Molmil
Crystal Structure of Pasteurella multocida sialyltransferase M144D mutant with CMP bound
Descriptor: Alpha-2,3/2,6-sialyltransferase/sialidase, CMP-3F(a)-Neu5Ac
Authors:Sugiarto, G, Lau, K, Li, Y, Lim, S, Ames, J.B, Le, D.-T, Fisher, A.J, Chen, X.
Deposit date:2011-05-18
Release date:2012-08-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A Sialyltransferase Mutant with Decreased Donor Hydrolysis and Reduced Sialidase Activities for Directly Sialylating Lewis(x).
Acs Chem.Biol., 7, 2012
7O2L
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BU of 7o2l by Molmil
Yeast 20S proteasome in complex with the covalently bound inhibitor b-lactone (2R,3S)-3-isopropyl-4-oxo-2-oxetane-carboxylate (IOC)
Descriptor: (2 {R},3 {S})-3-methanoyl-4-methyl-2-hydroxy-pentanoic acid, 20S proteasome, BJ4_G0020160.mRNA.1.CDS.1, ...
Authors:Shi, Y.M, Hirschmann, M, Shi, Y.N, Shabbir, A, Abebew, D, Tobias, N.J, Gruen, P, Crames, J.J, Poeschel, L, Kuttenlochner, W, Richter, C, Herrmann, J, Mueller, R, Thanwisai, A, Pidot, S.J, Stinear, T.P, Groll, M, Kim, Y, Bode, H.
Deposit date:2021-03-30
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Global analysis of biosynthetic gene clusters reveals conserved and unique natural products in entomopathogenic nematode-symbiotic bacteria.
Nat.Chem., 14, 2022
1YJD
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BU of 1yjd by Molmil
Crystal structure of human CD28 in complex with the Fab fragment of a mitogenic antibody (5.11A1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab fragment of 5.11A1 antibody heavy chain, Fab fragment of 5.11A1 antibody light chain, ...
Authors:Evans, E.J, Esnouf, R.M, Manso-Sancho, R, Gilbert, R.J.C, James, J.R, Sorensen, P, Stuart, D.I, Davis, S.J.
Deposit date:2005-01-14
Release date:2005-02-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a soluble CD28-Fab complex
Nat.Immunol., 6, 2005

223790

數據於2024-08-14公開中

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