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PDB: 56 件

1S9H
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Crystal Structure of Adeno-associated virus Type 2 Rep40
分子名称: Rep 40 protein
著者James, J.A, Escalante, C.R, Yoon-Robarts, M, Edwards, T.A, Linden, R.M, Aggarwal, A.K.
登録日2004-02-04
公開日2004-05-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of the SF3 Helicase from Adeno-Associated Virus Type 2
Structure, 11, 2003
5J7J
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NMR Derived Structure of Ca2+ Calmodulin bound to Phosphorylated PSD-95
分子名称: CALCIUM ION, Calmodulin, Disks large homolog 4
著者Turner, M.L, Ames, J.B, Anderson, D.E.
登録日2016-04-06
公開日2017-10-25
最終更新日2019-11-27
実験手法SOLUTION NMR
主引用文献Ca2+/calmodulin binding to PSD-95 mediates homeostatic synaptic scaling down.
Embo J., 37, 2018
6DRF
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Structure of human Retinal Degeneration 3(RD3) Protein
分子名称: Protein RD3
著者Yu, Q, Lim, S, Peshenko, I, Cudia, D, Dizhoor, A.M, Ames, J.B.
登録日2018-06-11
公開日2019-02-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Retinal degeneration 3 (RD3) protein, a retinal guanylyl cyclase regulator, forms a monomeric and elongated four-helix bundle.
J. Biol. Chem., 294, 2019
8DGH
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NMR Structure of calmodulin bound to C-terminal site in the beta-subunit of cyclic nucleotide-gated channel
分子名称: Calmodulin-1, Cyclic nucleotide-gated cation channel beta-1
著者Bej, A, Ames, J.B.
登録日2022-06-23
公開日2022-12-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR Structures of Calmodulin Bound to Two Separate Regulatory Sites in the Retinal Cyclic Nucleotide-Gated Channel.
Biochemistry, 61, 2022
8DGK
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NMR structure of calmodulin bound to N-terminal site in the beta-subunit of cyclic nucleotide-gated channel
分子名称: Calmodulin-1, Cyclic nucleotide-gated cation channel beta-1
著者Bej, A, Ames, J.B.
登録日2022-06-23
公開日2022-12-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR Structures of Calmodulin Bound to Two Separate Regulatory Sites in the Retinal Cyclic Nucleotide-Gated Channel.
Biochemistry, 61, 2022
7P7W
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N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine and ADP
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-20
公開日2022-08-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P7I
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Native structure of N-acetylglucosamine kinase from Plesiomonas shigelloides
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-19
公開日2022-07-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P9L
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N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine-6-phosphate
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-6-O-phosphono-beta-D-glucopyranose, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-27
公開日2022-08-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P9P
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N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine and AMP-PNP inhibitor
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-27
公開日2022-08-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7PA1
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Structure of N-acetylglucosamine kinase from Plesiomonas shigelloides in complex with AMP-PNP in the absence of N-acetylglucoseamine substrate
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-28
公開日2022-08-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
7P9Y
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N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-glucopyranose, ...
著者Roy, S, Isupov, M.N, Harmer, N.J, Ames, J.R.
登録日2021-07-28
公開日2022-08-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases
J.Biol.Chem., 2022
8VSX
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NMR Structure of GCAP5 R22A
分子名称: Guanylyl cyclase-activating protein 1
著者Cudia, D.L, Ames, J.B.
登録日2024-01-24
公開日2024-05-08
最終更新日2024-06-05
実験手法SOLUTION NMR
主引用文献NMR Structure of Retinal Guanylate Cyclase Activating Protein 5 (GCAP5) with R22A Mutation That Abolishes Dimerization and Enhances Cyclase Activation.
Biochemistry, 63, 2024
7KL5
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Structure of Calmodulin Bound to the Cardiac Ryanodine Receptor (RyR2) at Residues: Phe4246 to Val4271
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Calmodulin-1, ...
著者Fisher, A.J, Ames, J.B, Yu, Q.
登録日2020-10-29
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The Crystal Structure of Calmodulin Bound to the Cardiac Ryanodine Receptor (RyR2) at Residues Phe4246-Val4271 Reveals a Fifth Calcium Binding Site.
Biochemistry, 60, 2021
6C0A
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Actinin-1 EF-Hand bound to the Cav1.2 IQ Motif
分子名称: Alpha-actinin-1, Voltage-dependent L-type calcium channel subunit alpha-1C
著者Turner, M.L, Ames, J.B.
登録日2017-12-28
公開日2019-01-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Basis of the Localization and Activation of Neuronal L-type Ca2+ Channels by a-Actinin1 and Calmodulin
To be Published
6BHO
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Green Light-Absorbing State of NpR6012g4, a Red/Green Cyanobacteriochrome
分子名称: Methyl-accepting chemotaxis sensory transducer with phytochrome sensor, PHYCOCYANOBILIN
著者Lim, S, Yu, Q, Rockwell, N.C, Martin, S.S, Lagarias, J.C, Ames, J.B.
登録日2017-10-31
公開日2018-04-18
最終更新日2019-12-04
実験手法SOLUTION NMR
主引用文献Correlating structural and photochemical heterogeneity in cyanobacteriochrome NpR6012g4.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BHN
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Red Light-Absorbing State of NpR6012g4, a Red/Green Cyanobacteriochrome
分子名称: Methyl-accepting chemotaxis sensory transducer with phytochrome sensor, PHYCOCYANOBILIN
著者Yu, Q, Lim, S, Rockwell, N.C, Martin, S.S, Lagarias, J.C, Ames, J.B.
登録日2017-10-31
公開日2018-04-18
最終更新日2019-12-04
実験手法SOLUTION NMR
主引用文献Correlating structural and photochemical heterogeneity in cyanobacteriochrome NpR6012g4.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2MES
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BU of 2mes by Molmil
Backbone 1H, 13C, 15N resonance assignments of calcium-bound calmodulin in complex with PSD95 N-terminal peptide
分子名称: CALCIUM ION, Calmodulin, Disks large homolog 4
著者Zhang, Y, Ames, J.B.
登録日2013-09-26
公開日2014-12-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Capping of the N-terminus of PSD-95 by calmodulin triggers its postsynaptic release.
Embo J., 33, 2014
2NA0
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NMR structure of Guanylyl Cyclase Activator Protein 1 (GCAP1) mutant V77E in a Ca2+-free/Mg2+-bound Activator State
分子名称: Guanylyl cyclase-activating protein 1
著者Lim, S, Ames, J.B.
登録日2015-12-16
公開日2015-12-30
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure of Guanylyl Cyclase Activator Protein 1 (GCAP1) Mutant V77E in a Ca2+-free/Mg2+-bound Activator State.
J.Biol.Chem., 291, 2016
5T7C
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Solution structure of calcium free, myristoylated visinin-like protein 3
分子名称: Hippocalcin-like protein 1
著者Lim, S, Ames, J.B.
登録日2016-09-02
公開日2017-07-12
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure and Calcium Binding Properties of a Neuronal Calcium-Myristoyl Switch Protein, Visinin-Like Protein 3.
PLoS ONE, 11, 2016
5T0X
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Solution NMR-derived structure of calmodulin bound with ER alpha peptides
分子名称: CALCIUM ION, Calmodulin, Estrogen receptor peptide
著者Zhang, Y, Ames, J.B.
登録日2016-08-16
公開日2017-02-15
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution NMR-derived structure of calmodulin bound with ER alpha peptides
To Be Published
6CTB
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Apo-Calmodulin Bound to Calcium Voltage Gated Channel 1.2 IQ-Motif
分子名称: Calmodulin-1, Voltage-dependent L-type calcium channel subunit alpha-1C
著者Turner, M.L, Anderson, D.E, Ames, J.B.
登録日2018-03-22
公開日2019-09-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献apo-Calmodulin Bound to Calcium Voltage Gated Channel 1.2 IQ-Motif
To Be Published
1IKU
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myristoylated recoverin in the calcium-free state, NMR, 22 structures
分子名称: MYRISTIC ACID, RECOVERIN
著者Tanaka, T, Ames, J.B, Harvey, T.S, Stryer, L, Ikura, M.
登録日1996-01-18
公開日1996-07-11
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Sequestration of the membrane-targeting myristoyl group of recoverin in the calcium-free state.
Nature, 376, 1995
3S44
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Crystal Structure of Pasteurella multocida sialyltransferase M144D mutant with CMP bound
分子名称: Alpha-2,3/2,6-sialyltransferase/sialidase, CMP-3F(a)-Neu5Ac
著者Sugiarto, G, Lau, K, Li, Y, Lim, S, Ames, J.B, Le, D.-T, Fisher, A.J, Chen, X.
登録日2011-05-18
公開日2012-08-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献A Sialyltransferase Mutant with Decreased Donor Hydrolysis and Reduced Sialidase Activities for Directly Sialylating Lewis(x).
Acs Chem.Biol., 7, 2012
7O2L
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Yeast 20S proteasome in complex with the covalently bound inhibitor b-lactone (2R,3S)-3-isopropyl-4-oxo-2-oxetane-carboxylate (IOC)
分子名称: (2 {R},3 {S})-3-methanoyl-4-methyl-2-hydroxy-pentanoic acid, 20S proteasome, BJ4_G0020160.mRNA.1.CDS.1, ...
著者Shi, Y.M, Hirschmann, M, Shi, Y.N, Shabbir, A, Abebew, D, Tobias, N.J, Gruen, P, Crames, J.J, Poeschel, L, Kuttenlochner, W, Richter, C, Herrmann, J, Mueller, R, Thanwisai, A, Pidot, S.J, Stinear, T.P, Groll, M, Kim, Y, Bode, H.
登録日2021-03-30
公開日2022-04-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Global analysis of biosynthetic gene clusters reveals conserved and unique natural products in entomopathogenic nematode-symbiotic bacteria.
Nat.Chem., 14, 2022
1YJD
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BU of 1yjd by Molmil
Crystal structure of human CD28 in complex with the Fab fragment of a mitogenic antibody (5.11A1)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab fragment of 5.11A1 antibody heavy chain, Fab fragment of 5.11A1 antibody light chain, ...
著者Evans, E.J, Esnouf, R.M, Manso-Sancho, R, Gilbert, R.J.C, James, J.R, Sorensen, P, Stuart, D.I, Davis, S.J.
登録日2005-01-14
公開日2005-02-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of a soluble CD28-Fab complex
Nat.Immunol., 6, 2005

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