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PDB: 138 results

7QDE
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BU of 7qde by Molmil
NMR structure of Npl3 RRM12 bound to the AUCCAGUGGAA RNA
Descriptor: Nucleolar protein 3, RNA (5'-R(*AP*UP*CP*CP*AP*GP*UP*GP*GP*AP*A)-3')
Authors:Allain, F.H.-T, Clery, A, Moursy, A.
Deposit date:2021-11-26
Release date:2022-12-21
Last modified:2024-01-10
Method:SOLUTION NMR
Cite:RNA recognition by Npl3p reveals U2 snRNA-binding compatible with a chaperone role during splicing.
Nat Commun, 14, 2023
1AUD
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BU of 1aud by Molmil
U1A-UTRRNA, NMR, 31 STRUCTURES
Descriptor: RNA 3UTR, U1A 102
Authors:Allain, F.H.-T, Gubser, C.C, Howe, P.W.A, Nagai, K, Neuhaus, D, Varani, G.
Deposit date:1997-08-22
Release date:1998-02-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural basis of the RNA-binding specificity of human U1A protein.
EMBO J., 16, 1997
6HPJ
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BU of 6hpj by Molmil
Structure of human SRSF1 RRM1 bound to AACAAA RNA
Descriptor: Immunoglobulin G-binding protein G,Serine/arginine-rich splicing factor 1, RNA (5'-R(*AP*AP*CP*AP*AP*A)-3')
Authors:Allain, F.T.H, Clery, A.
Deposit date:2018-09-21
Release date:2020-11-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of SRSF1 RRM1 bound to RNA reveals an unexpected bimodal mode of interaction and explains its involvement in SMN1 exon7 splicing.
Nat Commun, 12, 2021
1HLX
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BU of 1hlx by Molmil
P1 HELIX NUCLEIC ACIDS (DNA/RNA) RIBONUCLEIC ACID
Descriptor: RNA (5'-R(*GP*GP*GP*AP*UP*AP*AP*CP*UP*UP*CP*GP*GP*UP*UP*GP*UP*CP*CP*C)-3')
Authors:Allain, F.H.-T, Varani, G.
Deposit date:1995-05-03
Release date:1995-09-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the P1 helix from group I self-splicing introns.
J.Mol.Biol., 250, 1995
1FJE
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BU of 1fje by Molmil
SOLUTION STRUCTURE OF NUCLEOLIN RBD12 IN COMPLEX WITH SNRE RNA
Descriptor: NUCLEOLIN RBD12, SNRE RNA
Authors:Allain, F.H.T, Bouvet, P, Dieckmann, T, Feigon, J.
Deposit date:2000-08-08
Release date:2001-01-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Molecular basis of sequence-specific recognition of pre-ribosomal RNA by nucleolin.
EMBO J., 19, 2000
2KG0
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BU of 2kg0 by Molmil
Structure of the second qRRM domain of hnRNP F in complex with a AGGGAU G-tract RNA
Descriptor: 5'-R(*AP*GP*GP*GP*AP*U)-3', Heterogeneous nuclear ribonucleoprotein F
Authors:Allain, F.H.T, Dominguez, C.
Deposit date:2009-03-02
Release date:2010-06-09
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs.
Nat.Struct.Mol.Biol., 17, 2010
2KFY
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BU of 2kfy by Molmil
NMR structure of the first qRRM of hnRNP F in complex with AGGGAU G-tract RNA
Descriptor: 5'-R(*AP*GP*GP*GP*AP*U)-3', Heterogeneous nuclear ribonucleoprotein F
Authors:Allain, F.H.T, Dominguez, C.
Deposit date:2009-03-02
Release date:2010-06-09
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs.
Nat.Struct.Mol.Biol., 17, 2010
2L2K
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BU of 2l2k by Molmil
Solution NMR structure of the R/G STEM LOOP RNA-ADAR2 DSRBM2 Complex
Descriptor: Adenosine deaminase, RNA (42-MER)
Authors:Allain, F.H.-T, Oberstrass, F.C, Stefl, R.
Deposit date:2010-08-20
Release date:2010-10-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove.
Cell(Cambridge,Mass.), 143, 2010
2LI8
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BU of 2li8 by Molmil
The solution structure of the Lin28-ZnF domains bound to AGGAGAU of pre-let-7 miRNA
Descriptor: Protein lin-28 homolog A, RNA (5'-R(*AP*GP*GP*AP*GP*AP*U)-3'), ZINC ION
Authors:Allain, F.H.-T, Loughlin, F.E.
Deposit date:2011-08-25
Release date:2011-12-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis of pre-let-7 miRNA recognition by the zinc knuckles of pluripotency factor Lin28.
Nat.Struct.Mol.Biol., 19, 2011
2L3C
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BU of 2l3c by Molmil
Solution structure of ADAR2 dsRBM1 bound to LSL RNA
Descriptor: Double-stranded RNA-specific editase 1, RNA (34-MER)
Authors:Allain, F, Stefl, R, Oberstrass, F.
Deposit date:2010-09-12
Release date:2010-10-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove.
Cell(Cambridge,Mass.), 143, 2010
1FJ7
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BU of 1fj7 by Molmil
SOLUTION STRUCTURE OF NUCLEOLIN RBD1
Descriptor: NUCLEOLIN RBD1
Authors:Allain, F.H.-T, Gilbert, D.E, Bouvet, P, Feigon, J.
Deposit date:2000-08-07
Release date:2000-10-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the two N-terminal RNA-binding domains of nucleolin and NMR study of the interaction with its RNA target.
J.Mol.Biol., 303, 2000
1FJC
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BU of 1fjc by Molmil
SOLUTION STRUCTURE OF NUCLEOLIN RBD2
Descriptor: NUCLEOLIN RBD2
Authors:Allain, F.H.-T, Gilbert, D.E, Bouvet, P, Feigon, J.
Deposit date:2000-08-07
Release date:2000-10-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the two N-terminal RNA-binding domains of nucleolin and NMR study of the interaction with its RNA target.
J.Mol.Biol., 303, 2000
1CG7
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BU of 1cg7 by Molmil
HMG PROTEIN NHP6A FROM SACCHAROMYCES CEREVISIAE
Descriptor: PROTEIN (NON HISTONE PROTEIN 6 A)
Authors:Allain, F.H.T, Yen, Y.M, Masse, J.E, Schultze, P, Dieckmann, T, Johnson, R.C, Feigon, J.
Deposit date:1999-03-27
Release date:1999-10-14
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the HMG protein NHP6A and its interaction with DNA reveals the structural determinants for non-sequence-specific binding.
EMBO J., 18, 1999
1FHT
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BU of 1fht by Molmil
RNA-BINDING DOMAIN OF THE U1A SPLICEOSOMAL PROTEIN U1A117, NMR, 43 STRUCTURES
Descriptor: U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
Authors:Allain, F.H.-T, Gubser, C.C, Howe, P.W.A, Nagai, K, Neuhaus, D, Varani, G.
Deposit date:1996-02-21
Release date:1996-07-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the N-terminal RNP domain of U1A protein: the role of C-terminal residues in structure stability and RNA binding.
J.Mol.Biol., 257, 1996
2ESE
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BU of 2ese by Molmil
Structure of the SAM domain of Vts1p in complex with RNA
Descriptor: 5'-R(*GP*GP*AP*GP*AP*GP*GP*CP*UP*CP*UP*GP*GP*CP*AP*GP*CP*UP*UP*UP*UP*CP*C)-3', Vts1p
Authors:Allain, F.H.T.
Deposit date:2005-10-26
Release date:2006-01-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Shape-specific recognition in the structure of the Vts1p SAM domain with RNA.
Nat.Struct.Mol.Biol., 13, 2006
2ES5
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BU of 2es5 by Molmil
Structure of the SRE RNA
Descriptor: 5'-R(*GP*GP*AP*GP*AP*GP*GP*CP*UP*CP*UP*GP*GP*CP*AP*GP*CP*UP*UP*UP*UP*CP*C)-3'
Authors:Allain, F.H.T.
Deposit date:2005-10-25
Release date:2006-01-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Shape-specific recognition in the structure of the Vts1p SAM domain with RNA.
Nat.Struct.Mol.Biol., 13, 2006
2EVZ
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BU of 2evz by Molmil
Structure of RNA Binding Domains 3 and 4 of Polypyrimidine Tract Binding Protein
Descriptor: Polypyrimidine tract-binding protein 1
Authors:Allain, F.H, Auweter, S.D.
Deposit date:2005-11-01
Release date:2006-01-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the two most C-terminal RNA recognition motifs of PTB using segmental isotope labeling
Embo J., 25, 2006
2ERR
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BU of 2err by Molmil
NMR Structure of the RNA Binding Domain of Human Fox-1 in Complex with UGCAUGU
Descriptor: Ataxin-2-binding protein 1, UGCAUGU
Authors:Allain, F.H, Auweter, S.D.
Deposit date:2005-10-25
Release date:2006-01-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Molecular basis of RNA recognition by the human alternative splicing factor Fox-1.
Embo J., 25, 2006
2KG1
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BU of 2kg1 by Molmil
Structure of the third qRRM domain of hnRNP F in complex with a AGGGAU G-tract RNA
Descriptor: 5'-R(*AP*GP*GP*GP*AP*U)-3', Heterogeneous nuclear ribonucleoprotein F
Authors:Allain, F.H.T, Dominguez, C.
Deposit date:2009-03-02
Release date:2010-06-09
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis of G-tract recognition and encaging by hnRNP F quasi-RRMs.
Nat.Struct.Mol.Biol., 17, 2010
2ES6
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BU of 2es6 by Molmil
Structure of the SAM domain of Vts1p
Descriptor: Vts1p
Authors:Allain, F.H.T.
Deposit date:2005-10-25
Release date:2006-01-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Shape-specific recognition in the structure of the Vts1p SAM domain with RNA.
Nat.Struct.Mol.Biol., 13, 2006
4LUP
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BU of 4lup by Molmil
Crystal structure of the complex formed by region of E. coli sigmaE bound to its -10 element non template strand
Descriptor: 1,2-ETHANEDIOL, RNA polymerase sigma factor, region 2 of sigmaE of E. coli
Authors:Campagne, S, Marsh, M.E, Vorholt, J.A.V, Allain, F.H.-T, Capitani, G.
Deposit date:2013-07-25
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural basis for -10 promoter element melting by environmentally induced sigma factors.
Nat.Struct.Mol.Biol., 21, 2014
8BGF
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BU of 8bgf by Molmil
NMR solution structure of the N-terminal RRM and flanking linker regions of Polypyrimidine tract binding protein 1 using the CYANA CONSENSUS method.
Descriptor: Polypyrimidine tract-binding protein 1
Authors:Damberger, F.D, Beusch, I, Allain, F.H.-T.
Deposit date:2022-10-27
Release date:2023-11-08
Last modified:2024-10-02
Method:SOLUTION NMR
Cite:N-terminal domain of polypyrimidine-tract binding protein is a dynamic folding platform for adaptive RNA recognition.
Nucleic Acids Res., 52, 2024
5OR5
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BU of 5or5 by Molmil
NMR structure of the complex formed by an engineered region 2 of sigmaE in complex with GTAAAA
Descriptor: DNA (5'-D(*GP*TP*AP*AP*AP*A)-3'), ECF RNA polymerase sigma-E factor,ECF RNA polymerase sigma factor SigW,ECF RNA polymerase sigma-E factor
Authors:Campagne, S, Vorholt, J.A, Allain, F.H.
Deposit date:2017-08-15
Release date:2018-06-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Engineered promoter selectivity of an ECF sigma factor
Not published
1LWA
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BU of 1lwa by Molmil
Solution Structure of SRY_DNA
Descriptor: 5'-D(*CP*TP*GP*AP*AP*CP*AP*AP*TP*CP*AP*CP*CP*CP*C)-3', 5'-D(*GP*GP*GP*GP*TP*GP*AP*TP*TP*GP*TP*TP*CP*AP*G)-3'
Authors:Masse, J.E, Wong, B, Yen, Y.-M, Allain, F.H.-T, Johnson, R.C, Feigon, J.
Deposit date:2002-05-30
Release date:2002-10-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The S. cerevisiae architectural HMGB protein NHP6A complexed with DNA: DNA and protein conformational changes upon binding
J.Mol.Biol., 323, 2002
4QPT
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BU of 4qpt by Molmil
Structural Investigation of hnRNP L
Descriptor: Heterogenous nuclear ribonucleoprotein L, PHOSPHATE ION
Authors:Blatter, M, Allain, F.H.-T.
Deposit date:2014-06-25
Release date:2015-05-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.351 Å)
Cite:The Signature of the Five-Stranded vRRM Fold Defined by Functional, Structural and Computational Analysis of the hnRNP L Protein.
J.Mol.Biol., 427, 2015

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