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PDB: 227 results

3NS7
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Succinic Acid Amides as P2-P3 Replacements for Inhibitors of Interleukin-1beta Converting Enzyme (ICE or Caspase 1)
Descriptor: (3S)-4-hydroxy-3-{[(2S)-4-{[2-(2-methyl-1H-benzimidazol-1-yl)ethyl]amino}-2-(1-methylethyl)-4-oxobutanoyl]amino}butanoic acid, Caspase-1
Authors:Galatsis, P.
Deposit date:2010-07-01
Release date:2011-08-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Succinic acid amides as P2-P3 replacements for inhibitors of interleukin-1beta converting enzyme (ICE or caspase 1).
Bioorg.Med.Chem.Lett., 20, 2010
3K4Z
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Crystal Structure of the Cellulosomal CBM4 from Clostridium thermocellum Cellulase CbhA
Descriptor: 1-O-phosphono-beta-D-glucopyranose, Glycoside hydrolase family 9, MAGNESIUM ION, ...
Authors:Alahuhta, P.M, Xu, Q, Himmel, M.E, Lunin, V.V.
Deposit date:2009-10-06
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:The unique binding mode of cellulosomal CBM4 from Clostridium thermocellum cellobiohydrolase A.
J.Mol.Biol., 402, 2010
3PE9
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Structures of Clostridium thermocellum CbhA fibronectin(III)-like modules
Descriptor: Fibronectin(III)-like module, IODIDE ION
Authors:Alahuhta, P.M, Lunin, V.V.
Deposit date:2010-10-25
Release date:2011-11-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structure and function of the Clostridium thermocellum cellobiohydrolase A X1-module repeat: enhancement through stabilization of the CbhA complex.
Acta Crystallogr.,Sect.D, 68, 2012
3P6B
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BU of 3p6b by Molmil
The crystal structure of CelK CBM4 from Clostridium thermocellum
Descriptor: ACETATE ION, CALCIUM ION, Cellulose 1,4-beta-cellobiosidase, ...
Authors:Alahuhta, P.M, Luo, Y, Lunin, V.V.
Deposit date:2010-10-11
Release date:2011-08-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of CBM4 from Clostridium thermocellum cellulase K.
Acta Crystallogr.,Sect.F, 67, 2011
3PDD
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BU of 3pdd by Molmil
Structures of Clostridium thermocellum CbhA fibronectin(III)-like modules
Descriptor: CALCIUM ION, CHLORIDE ION, Glycoside hydrolase, ...
Authors:Alahuhta, P.M, Lunin, V.V.
Deposit date:2010-10-22
Release date:2011-11-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structure and function of the Clostridium thermocellum cellobiohydrolase A X1-module repeat: enhancement through stabilization of the CbhA complex.
Acta Crystallogr.,Sect.D, 68, 2012
3PDG
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BU of 3pdg by Molmil
Structures of Clostridium thermocellum CbhA fibronectin(III)-like modules
Descriptor: Fibronectin(III)-like module, SODIUM ION
Authors:Alahuhta, P.M, Lunin, V.V.
Deposit date:2010-10-22
Release date:2011-11-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure and function of the Clostridium thermocellum cellobiohydrolase A X1-module repeat: enhancement through stabilization of the CbhA complex.
Acta Crystallogr.,Sect.D, 68, 2012
4WD4
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BU of 4wd4 by Molmil
Crystal structure of human HO1 H25R
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Caaveiro, J.M.M, Morante, K, Sigala, P, Tsumoto, K.
Deposit date:2014-09-06
Release date:2015-09-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:In-Cell Enzymology To Probe His-Heme Ligation in Heme Oxygenase Catalysis
Biochemistry, 55, 2016
4EX7
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Crystal structure of the alnumycin P phosphatase in complex with free phosphate
Descriptor: AlnB, BORIC ACID, MAGNESIUM ION, ...
Authors:Oja, T, Niiranen, L, Sandalova, T, Klika, K.D, Niemi, J, Mantsala, P, Schneider, G, Metsa-Ketela, M.
Deposit date:2012-04-30
Release date:2013-01-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis for C-ribosylation in the alnumycin A biosynthetic pathway.
Proc.Natl.Acad.Sci.USA, 110, 2013
4EX8
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Crystal structure of the prealnumycin C-glycosynthase AlnA
Descriptor: AlnA, CALCIUM ION, CHLORIDE ION, ...
Authors:Oja, T, Niiranen, L, Sandalova, T, Klika, K.D, Niemi, J, Mantsala, P, Schneider, G, Metsa-Ketela, M.
Deposit date:2012-04-30
Release date:2013-01-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for C-ribosylation in the alnumycin A biosynthetic pathway.
Proc.Natl.Acad.Sci.USA, 110, 2013
5IAA
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Crystal structure of human UBA5 in complex with UFM1
Descriptor: Ubiquitin-fold modifier 1, Ubiquitin-like modifier-activating enzyme 5, ZINC ION
Authors:Oweis, W, Padala, P, Wiener, R.
Deposit date:2016-02-21
Release date:2016-09-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Trans-Binding Mechanism of Ubiquitin-like Protein Activation Revealed by a UBA5-UFM1 Complex.
Cell Rep, 16, 2016
1G66
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ACETYLXYLAN ESTERASE AT 0.90 ANGSTROM RESOLUTION
Descriptor: ACETYL XYLAN ESTERASE II, GLYCEROL, SULFATE ION
Authors:Ghosh, D, Sawicki, M, Lala, P, Erman, M, Pangborn, W, Eyzaguirre, J, Gutierrez, R, Jornvall, H, Thiel, D.J.
Deposit date:2000-11-03
Release date:2001-01-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Multiple conformations of catalytic serine and histidine in acetylxylan esterase at 0.90 A.
J.Biol.Chem., 276, 2001
2VEW
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CRYSTAL STRUCTURE OF PROTEIN TYROSINE PHOSPHATASE 1B IN COMPLEX WITH AN ISOTHIAZOLIDINONE-CONTAINING INHIBITOR
Descriptor: 3-fluoro-N-[(1S)-1-[4-[(2-fluorophenyl)methyl]imidazol-2-yl]-2-[4-[(5S)-1,1,3-trioxo-1,2-thiazolidin-5-yl]phenyl]ethyl]benzenesulfonamide, MAGNESIUM ION, TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1
Authors:Douty, B, Wayland, B, Ala, P.J, Bower, M.J, Pruitt, J, Bostrom, L, Wei, M, Klabe, R, Gonneville, L, Wynn, R, Burn, T.C, Liu, P.C.C, Combs, A.P, Yue, E.W.
Deposit date:2007-10-27
Release date:2007-11-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Isothiazolidinone Inhibitors of Ptp1B Containing Imidazoles and Imidazolines
Bioorg.Med.Chem.Lett., 18, 2008
2VEX
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BU of 2vex by Molmil
CRYSTAL STRUCTURE OF PROTEIN TYROSINE PHOSPHATASE 1B IN COMPLEX WITH AN ISOTHIAZOLIDINONE-CONTAINING INHIBITOR
Descriptor: MAGNESIUM ION, N-{(1S)-2-{4-[(5S)-1,1-dioxido-3-oxoisothiazolidin-5-yl]phenyl}-1-[(4R)-4-(2-phenylethyl)-4,5-dihydro-1H-imidazol-2-yl]ethyl}-3-fluorobenzenesulfonamide, TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1
Authors:Douty, B, Wayland, B, Ala, P.J, Bower, M.J, Pruitt, J, Bostrom, L, Wei, M, Klabe, R, Gonneville, L, Wynn, R, Burn, T.C, Liu, P.C.C, Combs, A.P, Yue, E.W.
Deposit date:2007-10-27
Release date:2007-11-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Isothiazolidinone Inhibitors of Ptp1B Containing Imidazoles and Imidazolines
Bioorg.Med.Chem.Lett., 18, 2008
2VEV
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BU of 2vev by Molmil
CRYSTAL STRUCTURE OF PROTEIN TYROSINE PHOSPHATASE 1B IN COMPLEX WITH AN ISOTHIAZOLIDINONE-CONTAINING INHIBITOR
Descriptor: MAGNESIUM ION, N-[(1S)-1-(4-benzyl-1H-imidazol-2-yl)-2-{4-[(5S)-1,1-dioxido-3-oxoisothiazolidin-5-yl]phenyl}ethyl]-3-(trifluoromethyl)benzenesulfonamide, TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1
Authors:Douty, B, Wayland, B, Ala, P.J, Bower, M.J, Pruitt, J, Bostrom, L, Wei, M, Klabe, R, Gonneville, L, Wynn, R, Burn, T.C, Liu, P.C.C, Combs, A.P, Yue, E.W.
Deposit date:2007-10-27
Release date:2007-11-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Isothiazolidinone Inhibitors of Ptp1B Containing Imidazoles and Imidazolines
Bioorg.Med.Chem.Lett., 18, 2008
2VEY
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BU of 2vey by Molmil
CRYSTAL STRUCTURE OF PROTEIN TYROSINE PHOSPHATASE 1B IN COMPLEX WITH AN ISOTHIAZOLIDINONE-CONTAINING INHIBITOR
Descriptor: N-{(1S)-2-{4-[(5S)-1,1-dioxido-3-oxoisothiazolidin-5-yl]phenyl}-1-[4-(3-phenylpropyl)-1H-imidazol-2-yl]ethyl}-3-fluorobenzenesulfonamide, TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1
Authors:Douty, B, Wayland, B, Ala, P.J, Bower, M.J, Pruitt, J, Bostrom, L, Wei, M, Klabe, R, Gonneville, L, Wynn, R, Burn, T.C, Liu, P.C.C, Combs, A.P, Yue, E.W.
Deposit date:2007-10-27
Release date:2007-11-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Isothiazolidinone Inhibitors of Ptp1B Containing Imidazoles and Imidazolines
Bioorg.Med.Chem.Lett., 18, 2008
2VEU
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BU of 2veu by Molmil
Crystal structure of protein tyrosine phosphatase 1B in complex with an isothiazolidinone-containing inhibitor
Descriptor: N-[(1S)-2-{4-[(5S)-1,1-dioxido-3-oxoisothiazolidin-5-yl]phenyl}-1-(4-phenyl-1H-imidazol-2-yl)ethyl]-3-(trifluoromethyl)benzenesulfonamide, TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1
Authors:Douty, B, Wayland, B, Ala, P.J, Bower, M.J, Pruitt, J, Bostrom, L, Wei, M, Klabe, R, Gonneville, L, Wynn, R, Burn, T.C, Liu, P.C.C, Combs, A.P, Yue, E.W.
Deposit date:2007-10-27
Release date:2007-11-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Isothiazolidinone Inhibitors of Ptp1B Containing Imidazoles and Imidazolines
Bioorg.Med.Chem.Lett., 18, 2008
7NW1
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BU of 7nw1 by Molmil
Crystal structure of UFC1 in complex with UBA5
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Manoj Kumar, P, Padala, P, Isupov, M.N, Wiener, R.
Deposit date:2021-03-16
Release date:2021-09-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for UFM1 transfer from UBA5 to UFC1.
Nat Commun, 12, 2021
8CF9
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BU of 8cf9 by Molmil
Crystal structure of the human PXR ligand-binding domain in complex with sclareol
Descriptor: GLYCEROL, Nuclear receptor subfamily 1 group I member 2, sclareol
Authors:Carivenc, C, Derosa, Q, Grimaldi, M, Boulahtouf, A, Balaguer, P, Bourguet, W.
Deposit date:2023-02-03
Release date:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the human PXR ligand-binding domain in complex with sclareol
To Be Published
8CH8
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BU of 8ch8 by Molmil
Crystal structure of the human PXR ligand-binding domain in complex with liranaftate
Descriptor: Nuclear receptor subfamily 1 group I member 2, ~{O}-(5,6,7,8-tetrahydronaphthalen-2-yl) ~{N}-(6-methoxypyridin-2-yl)-~{N}-methyl-carbamothioate
Authors:Carivenc, C, Derosa, Q, Grimaldi, M, Boulahtouf, A, Balaguer, P, Bourguet, W.
Deposit date:2023-02-07
Release date:2024-02-21
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of the human PXR ligand-binding domain in complex with liranaftate
To Be Published
8CCT
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Crystal structure of the human PXR ligand-binding domain in complex with 2,2'-dichloro bisphenol A
Descriptor: 2-chloranyl-4-[2-(3-chloranyl-4-oxidanyl-phenyl)propan-2-yl]phenol, Nuclear receptor subfamily 1 group I member 2
Authors:Derosa, Q, Grimaldi, M, Carivenc, C, Boulahtouf, A, Bourguet, W, Balaguer, P.
Deposit date:2023-01-27
Release date:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the hPXR-LBD in complex with 2,2'-dichloro bisphenol A
To Be Published
6NZG
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BU of 6nzg by Molmil
Bacteroides uniformis beta-glucuronidase 2 covalently bound to cyclophellitol-6-carboxylate aziridine
Descriptor: (1S,2R,3S,4S,5S,6R)-2-amino-3,4,5,6-tetrahydroxycyclohexane-1-carboxylic acid, Beta-galactosidase, CALCIUM ION, ...
Authors:Pellock, S.J, Jariwala, P.B, Redinbo, M.R.
Deposit date:2019-02-13
Release date:2019-12-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Discovering the Microbial Enzymes Driving Drug Toxicity with Activity-Based Protein Profiling.
Acs Chem.Biol., 15, 2020
7NVJ
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BU of 7nvj by Molmil
Crystal structure of UFC1 Y110A & F121A
Descriptor: GLYCEROL, Ubiquitin-fold modifier-conjugating enzyme 1
Authors:Manoj Kumar, P, Padala, P, Isupov, M.N, Wiener, R.
Deposit date:2021-03-15
Release date:2021-09-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for UFM1 transfer from UBA5 to UFC1.
Nat Commun, 12, 2021
7NVK
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Crystal structure of UBA5 fragment fused to the N-terminus of UFC1
Descriptor: Ubiquitin-like modifier-activating enzyme 5,Ubiquitin-fold modifier-conjugating enzyme 1
Authors:Manoj Kumar, P, Padala, P, Isupov, M.N, Wiener, R.
Deposit date:2021-03-15
Release date:2021-09-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.651 Å)
Cite:Structural basis for UFM1 transfer from UBA5 to UFC1.
Nat Commun, 12, 2021
7Q8B
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BU of 7q8b by Molmil
Leishmania major actin filament in ADP-Pi state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, MAGNESIUM ION, ...
Authors:Kotila, T, Muniyandi, S, Lappalainen, P, Huiskonen, J.T.
Deposit date:2021-11-11
Release date:2022-05-18
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of rapid actin dynamics in the evolutionarily divergent Leishmania parasite.
Nat Commun, 13, 2022
7Q8C
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BU of 7q8c by Molmil
Leishmania major actin filament in ADP-state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, MAGNESIUM ION
Authors:Kotila, T, Muniyandi, S, Lappalainen, P, Huiskonen, J.T.
Deposit date:2021-11-11
Release date:2022-05-18
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Structural basis of rapid actin dynamics in the evolutionarily divergent Leishmania parasite.
Nat Commun, 13, 2022

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