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PDB: 322 件

1UGL
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Solution structure of S8-SP11
分子名称: S-locus pollen protein
著者Mishima, M, Takayama, S, Sasaki, K, Jee, J.G, Kojima, C, Isogai, A, Shirakawa, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-16
公開日2003-09-30
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structure of the Male Determinant Factor for Brassica Self-incompatibility
J.Biol.Chem., 278, 2003
3AK1
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Superoxide dismutase from Aeropyrum pernix K1, apo-form
分子名称: 1,2-ETHANEDIOL, Superoxide dismutase [Mn/Fe]
著者Nakamura, T, Uegaki, K.
登録日2010-06-30
公開日2011-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Crystal structure of the cambialistic superoxide dismutase from Aeropyrum pernix K1 - insights into the enzyme mechanism and stability
Febs J., 278, 2011
3AGI
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BU of 3agi by Molmil
High resolution X-ray analysis of Arg-lysozyme complex in the presence of 500 mM Arg
分子名称: ACETATE ION, ARGININE, CHLORIDE ION, ...
著者Ito, L, Shiraki, K, Hasegawa, K, Baba, S, Kumasaka, T.
登録日2010-03-31
公開日2011-03-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献High-resolution X-ray analysis reveals binding of arginine to aromatic residues of lysozyme surface: implication of suppression of protein aggregation by arginine
Protein Eng.Des.Sel., 24, 2011
3AK2
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Superoxide dismutase from Aeropyrum pernix K1, Mn-bound form
分子名称: 1,2-ETHANEDIOL, MANGANESE (II) ION, Superoxide dismutase [Mn/Fe]
著者Nakamura, T, Uegaki, K.
登録日2010-06-30
公開日2011-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystal structure of the cambialistic superoxide dismutase from Aeropyrum pernix K1 - insights into the enzyme mechanism and stability
Febs J., 278, 2011
3WMG
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BU of 3wmg by Molmil
Crystal structure of an inward-facing eukaryotic ABC multidrug transporter G277V/A278V/A279V mutant in complex with an cyclic peptide inhibitor, aCAP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ATP-binding cassette, sub-family B, ...
著者Kodan, A, Yamaguchi, T, Nakatsu, T, Sakiyama, K, Hipolito, C.J, Fujioka, A, Hirokane, R, Ikeguchi, K, Watanabe, B, Hirtake, J, Kimura, Y, Suga, H, Ueda, K, Kato, H.
登録日2013-11-18
公開日2014-04-30
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for gating mechanisms of a eukaryotic P-glycoprotein homolog.
Proc.Natl.Acad.Sci.USA, 111, 2014
1VEE
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BU of 1vee by Molmil
NMR structure of the hypothetical rhodanese domain At4g01050 from Arabidopsis thaliana
分子名称: proline-rich protein family
著者Pantoja-Uceda, D, Lopez-Mendez, B, Koshiba, S, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Tanaka, A, Seki, M, Shinozaki, K, Yokoyama, S, Guntert, P, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-30
公開日2005-01-25
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the rhodanese homology domain At4g01050(175-295) from Arabidopsis thaliana
Protein Sci., 14, 2005
1GE6
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ZINC PEPTIDASE FROM GRIFOLA FRONDOSA
分子名称: PEPTIDYL-LYS METALLOENDOPEPTIDASE, ZINC ION, alpha-D-mannopyranose
著者Hori, T, Kumasaka, T, Yamamoto, M, Nonaka, T, Tanaka, N, Hashimoto, Y, Ueki, T, Takio, K.
登録日2000-10-11
公開日2001-03-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a new 'aspzincin' metalloendopeptidase from Grifola frondosa: implications for the catalytic mechanism and substrate specificity based on several different crystal forms.
Acta Crystallogr.,Sect.D, 57, 2001
3ATO
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Glycine ethyl ester shielding on the aromatic surfaces of lysozyme: Implication for suppression of protein aggregation
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
著者Ito, L, Shiraki, K, Hasegawa, K, Kumasaka, T.
登録日2011-01-06
公開日2012-03-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Glycine ethyl ester shielding on the aromatic surfaces of lysozyme: Implication for suppression of protein aggregation
To be Published
2ZB5
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BU of 2zb5 by Molmil
Crystal structure of the measles virus hemagglutinin (complex-sugar-type)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin protein
著者Hashiguchi, T, Kajikawa, M, Maita, N, Takeda, M, Kuroki, K, Sasaki, K, Kohda, D, Yanagi, Y, Maenaka, K.
登録日2007-10-16
公開日2007-11-06
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of measles virus hemagglutinin provides insight into effective vaccines
Proc.Natl.Acad.Sci.Usa, 104, 2007
1VDY
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BU of 1vdy by Molmil
NMR Structure of the hypothetical ENTH-VHS domain At3g16270 from Arabidopsis thaliana
分子名称: hypothetical protein (RAFL09-17-B18)
著者Lopez-Mendez, B, Pantoja-Uceda, D, Tomizawa, T, Koshiba, S, Kigawa, T, Shirouzu, M, Terada, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Seki, M, Shinozaki, K, Yokoyama, S, Guntert, P, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-25
公開日2005-05-03
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the hypothetical ENTH-VHS domain AT3G16270 from arabidopsis thaliana
To be Published
1GE5
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ZINC PEPTIDASE FROM GRIFOLA FRONDOSA
分子名称: PEPTIDYL-LYS METALLOENDOPEPTIDASE, ZINC ION, alpha-D-mannopyranose
著者Hori, T, Kumasaka, T, Yamamoto, M, Nonaka, T, Tanaka, N, Hashimoto, Y, Ueki, T, Takio, K.
登録日2000-10-11
公開日2001-03-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a new 'aspzincin' metalloendopeptidase from Grifola frondosa: implications for the catalytic mechanism and substrate specificity based on several different crystal forms.
Acta Crystallogr.,Sect.D, 57, 2001
1G12
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BU of 1g12 by Molmil
ZINC PEPTIDASE FROM GRIFOLA FRONDOSA
分子名称: PEPTIDYL-LYS METALLOENDOPEPTIDASE, ZINC ION, alpha-D-mannopyranose
著者Hori, T, Kumasaka, T, Yamamoto, M, Nonaka, T, Tanaka, N, Hashimoto, Y, Ueki, T, Takio, K.
登録日2000-10-10
公開日2001-03-14
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of a new 'aspzincin' metalloendopeptidase from Grifola frondosa: implications for the catalytic mechanism and substrate specificity based on several different crystal forms.
Acta Crystallogr.,Sect.D, 57, 2001
1GE7
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BU of 1ge7 by Molmil
ZINC PEPTIDASE FROM GRIFOLA FRONDOSA
分子名称: PEPTIDYL-LYS METALLOENDOPEPTIDASE, ZINC ION, alpha-D-mannopyranose
著者Hori, T, Kumasaka, T, Yamamoto, M, Nonaka, T, Tanaka, N, Hashimoto, Y, Ueki, T, Takio, K.
登録日2000-10-11
公開日2001-03-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a new 'aspzincin' metalloendopeptidase from Grifola frondosa: implications for the catalytic mechanism and substrate specificity based on several different crystal forms.
Acta Crystallogr.,Sect.D, 57, 2001
3ATN
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BU of 3atn by Molmil
Glycine ethyl ester shielding on the aromatic surfaces of lysozyme: Implication for suppression of protein aggregation
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Ito, L, Shiraki, K, Hasegawa, K, Kumasaka, T.
登録日2011-01-06
公開日2012-03-07
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Glycine ethyl ester shielding on the aromatic surfaces of lysozyme: Implication for suppression of protein aggregation
To be Published
3ASX
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BU of 3asx by Molmil
Human Squalene synthase in complex with 1-{4-[{4-chloro-2-[(2-chlorophenyl)(hydroxy)methyl]phenyl}(2,2-dimethylpropyl)amino]-4-oxobutanoyl}piperidine-3-carboxylic acid
分子名称: (3R)-1-{4-[{4-chloro-2-[(S)-(2-chlorophenyl)(hydroxy)methyl]phenyl}(2,2-dimethylpropyl)amino]-4-oxobutanoyl}piperidine-3-carboxylic acid, PHOSPHATE ION, Squalene synthase
著者Shimizu, H, Suzuki, M, Katakura, S, Yamazaki, K, Higashihashi, N, Ichikawa, M, Yokomizo, A, Itoh, M, Sugita, K, Usui, H.
登録日2010-12-22
公開日2011-12-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of a new 2-aminobenzhydrol template for highly potent squalene synthase inhibitors
Bioorg.Med.Chem., 19, 2011
3A8U
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BU of 3a8u by Molmil
Crystal Structure of omega-Amino Acid:Pyruvate Aminotransferase
分子名称: Omega-amino acid--pyruvate aminotransferase, PYRIDOXAL-5'-PHOSPHATE
著者Watanabe, N, Sakabe, N, Sakabe, K, Sasaki, K.
登録日2009-10-11
公開日2009-11-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal Structure of omega-Amino Acid:Pyruvate Aminotransferase
to be published
1ICH
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BU of 1ich by Molmil
SOLUTION STRUCTURE OF THE TUMOR NECROSIS FACTOR RECEPTOR-1 DEATH DOMAIN
分子名称: TUMOR NECROSIS FACTOR RECEPTOR-1
著者Sukits, S.F, Lin, L.-L, Malakian, K, Powers, R, Xu, G.-Y.
登録日2001-04-01
公開日2002-04-01
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the tumor necrosis factor receptor-1 death domain.
J.Mol.Biol., 310, 2001
3WXQ
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BU of 3wxq by Molmil
Serial femtosecond X-ray structure of human fatty acid-binding protein type-3 (FABP3) in complex with stearic acid (C18:0) determined using X-ray free-electron laser at SACLA
分子名称: Fatty acid-binding protein, heart, STEARIC ACID
著者Mizohata, E, Suzuki, M, Kakinouchi, K, Sugiyama, S, Murata, M, Sugahara, M, Nango, E, Tanaka, T, Tanaka, R, Tono, K, Song, C, Hatsui, T, Joti, Y, Yabashi, M, Iwata, S.
登録日2014-08-04
公開日2014-11-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Grease matrix as a versatile carrier of proteins for serial crystallography
Nat. Methods, 12, 2015
3AK3
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Superoxide dismutase from Aeropyrum pernix K1, Fe-bound form
分子名称: 1,2-ETHANEDIOL, FE (III) ION, Superoxide dismutase [Mn/Fe]
著者Nakamura, T, Uegaki, K.
登録日2010-06-30
公開日2011-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Crystal structure of the cambialistic superoxide dismutase from Aeropyrum pernix K1 - insights into the enzyme mechanism and stability
Febs J., 278, 2011
3X0V
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BU of 3x0v by Molmil
Structure of L-lysine oxidase
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, L-lysine oxidase
著者Sano, T, Uchida, Y, Amano, M, Kawaguchi, T, Kondo, H, Inagaki, K, Imada, K.
登録日2014-10-22
公開日2015-04-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Recombinant expression, molecular characterization and crystal structure of antitumor enzyme, l-lysine alpha-oxidase from Trichoderma viride.
J.Biochem., 157, 2015
2ZB6
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BU of 2zb6 by Molmil
Crystal structure of the measles virus hemagglutinin (oligo-sugar type)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin protein
著者Hashiguchi, T, Kajikawa, M, Maita, N, Takeda, M, Kuroki, K, Sasaki, K, Kohda, D, Yanagi, Y, Maenaka, K.
登録日2007-10-16
公開日2007-11-06
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of measles virus hemagglutinin provides insight into effective vaccines
Proc.Natl.Acad.Sci.Usa, 104, 2007
1F2H
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BU of 1f2h by Molmil
SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF THE TNFR1 ASSOCIATED PROTEIN, TRADD.
分子名称: TUMOR NECROSIS FACTOR RECEPTOR TYPE 1 ASSOCIATED DEATH DOMAIN PROTEIN
著者Tsao, D, McDonaugh, T, Malakian, K, Xu, G.-Y, Telliez, J.-B, Hsu, H, Lin, L.-L.
登録日2000-05-24
公開日2001-05-30
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of N-TRADD and characterization of the interaction of N-TRADD and C-TRAF2, a key step in the TNFR1 signaling pathway.
Mol.Cell, 5, 2000
3VP8
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Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p
分子名称: General transcriptional corepressor TUP1
著者Matsumura, H, Kusaka, N, Nakamura, T, Tanaka, N, Sagegami, K, Uegaki, K, Inoue, T, Mukai, Y.
登録日2012-02-28
公開日2012-06-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p and its functional implications
J.Biol.Chem., 287, 2012
3A0F
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The crystal structure of Geotrichum sp. M128 xyloglucanase
分子名称: Xyloglucanase
著者Yaoi, K, Kondo, H, Hiyoshi, A, Noro, N, Sugimoto, H, Tsuda, S, Miyazaki, K.
登録日2009-03-16
公開日2009-09-08
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of a xyloglucan-specific endo-beta-1,4-glucanase from Geotrichum sp. M128 xyloglucanase reveals a key amino acid residue for substrate specificity
Febs J., 276, 2009
1U9E
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BU of 1u9e by Molmil
CRYSTAL STRUCTURE OF ESTROGEN RECEPTOR BETA COMPLEXED WITH WAY-397
分子名称: 2-(4-HYDROXY-PHENYL)BENZOFURAN-5-OL, Estrogen receptor beta, STEROID RECEPTOR COACTIVATOR-1
著者Manas, E.S, Unwalla, R.J, Xu, Z.B, Malamas, M.S, Miller, C.P, Harris, H.A, Hsiao, C, Akopian, T, Hum, W.T, Malakian, K, Wolfrom, S, Bapat, A, Bhat, R.A, Stahl, M.L, Somers, W.S, Alvarez, J.C.
登録日2004-08-09
公開日2005-03-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure-Based Design Of Estrogen Receptor-beta Selective Ligands
J.Am.Chem.Soc., 126, 2004

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