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PDB: 322 results

5B2F
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BU of 5b2f by Molmil
N,N'-diacetylchitobiose deacetylase from Pyrococcus horikoshii complexed with its inhibitor MPG (phosphate-containing condition)
Descriptor: 2-deoxy-2-{[(S)-hydroxy(methyl)phosphoryl]amino}-beta-D-glucopyranose, Putative uncharacterized protein PH0499, ZINC ION
Authors:Nakamura, T, Niiyama, M, Ida, K, Uegaki, K.
Deposit date:2016-01-15
Release date:2016-08-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Substrate recognition of N,N'-diacetylchitobiose deacetylase from Pyrococcus horikoshii
J.Struct.Biol., 195, 2016
4E9W
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Multicopper Oxidase mgLAC (data2)
Descriptor: CHLORIDE ION, COPPER (II) ION, Multicopper oxidase, ...
Authors:Komori, H, Miyazaki, K, Higuchi, Y.
Deposit date:2012-03-21
Release date:2013-03-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:New insights into the catalytic active-site structure of multicopper oxidases.
Acta Crystallogr.,Sect.D, 70, 2014
7FBW
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BU of 7fbw by Molmil
Acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis
Descriptor: NICKEL (II) ION, Predicted xylanase/chitin deacetylase
Authors:Sasamoto, K, Himiyama, T, Moriyoshi, K, Ohmoto, T, Uegaki, K, Nishiya, Y, Nakamura, T.
Deposit date:2021-07-13
Release date:2021-10-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis.
Acta Crystallogr.,Sect.F, 77, 2021
4E9X
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Multicopper Oxidase mgLAC (data3)
Descriptor: CHLORIDE ION, COPPER (II) ION, Multicopper oxidase, ...
Authors:Komori, H, Miyazaki, K, Higuchi, Y.
Deposit date:2012-03-21
Release date:2013-03-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:New insights into the catalytic active-site structure of multicopper oxidases.
Acta Crystallogr.,Sect.D, 70, 2014
4E9V
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BU of 4e9v by Molmil
Multicopper Oxidase mgLAC (data1)
Descriptor: CHLORIDE ION, COPPER (II) ION, HYDROXIDE ION, ...
Authors:Komori, H, Miyazaki, K, Higuchi, Y.
Deposit date:2012-03-21
Release date:2013-03-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:New insights into the catalytic active-site structure of multicopper oxidases.
Acta Crystallogr.,Sect.D, 70, 2014
1MIE
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BU of 1mie by Molmil
Crystal Structure Of The Fab Fragment of Esterolytic Antibody MS5-393
Descriptor: IMMUNOGLOBULIN MS5-393
Authors:Ruzheinikov, S.N, Muranova, T.A, Sedelnikova, S.E, Partridge, L.J, Blackburn, G.M, Murray, I.A, Kakinuma, H, Takashi, N, Shimazaki, K, Sun, J, Nishi, Y, Rice, D.W.
Deposit date:2002-08-23
Release date:2003-09-23
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:High-resolution crystal structure of the Fab-fragments of a family of mouse catalytic antibodies with esterase activity
J.Mol.Biol., 332, 2003
2LMK
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BU of 2lmk by Molmil
Solution Structure of Mouse Pheromone ESP1
Descriptor: Exocrine gland-secreting peptide 1
Authors:Yoshinaga, S, Sato, T, Hirakane, M, Esaki, K, Hamaguchi, T, Haga-Yamanaka, S, Tsunoda, M, Kimoto, H, Shimada, I, Touhara, K, Terasawa, H.
Deposit date:2011-12-06
Release date:2013-04-17
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of the Mouse Sex Peptide Pheromone ESP1 Reveals a Molecular Basis for Specific Binding to the Class-C G-Protein-Coupled Vomeronasal Receptor
J.Biol.Chem., 2013
7C3I
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BU of 7c3i by Molmil
Structure of L-lysine oxidase D212A/D315A
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Kitagawa, M, Matsumoto, Y, Inagaki, K, Imada, K.
Deposit date:2020-05-12
Release date:2020-09-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of strict substrate recognition of l-lysine alpha-oxidase from Trichoderma viride.
Protein Sci., 29, 2020
3Q30
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BU of 3q30 by Molmil
Human Squalene synthase in complex with (2R,3R)-2-Carboxymethoxy-3-[5-(2-naphthalenyl)pentyl]aminocarbonyl-3-[5-(2-naphthalenyl)pentyloxy]propionic acid
Descriptor: (2R,3R)-2-(carboxymethoxy)-4-{[5-(naphthalen-2-yl)pentyl]amino}-3-{[5-(naphthalen-2-yl)pentyl]oxy}-4-oxobutanoic acid, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Suzuki, M, Shimizu, H, Katakura, S, Yamazaki, K, Higashihashi, N, Ichikawa, M, Yokomizo, A, Itoh, M, Sugita, K, Usui, H.
Deposit date:2010-12-21
Release date:2011-12-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of a new 2-aminobenzhydrol template for highly potent squalene synthase inhibitors
Bioorg.Med.Chem., 19, 2011
7C3L
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BU of 7c3l by Molmil
Structure of L-lysine oxidase D212A/D315A in complex with L-tyrosine
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, L-lysine oxidase, ...
Authors:Kitagawa, M, Matsumoto, Y, Inagaki, K, Imada, K.
Deposit date:2020-05-12
Release date:2020-09-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of strict substrate recognition of l-lysine alpha-oxidase from Trichoderma viride.
Protein Sci., 29, 2020
7C3J
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BU of 7c3j by Molmil
Structure of L-lysine oxidase D212A/D315A in complex with L-phenylalanine
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, L-lysine oxidase, ...
Authors:Kitagawa, M, Matsumoto, Y, Inagaki, K, Imada, K.
Deposit date:2020-05-12
Release date:2020-09-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of strict substrate recognition of l-lysine alpha-oxidase from Trichoderma viride.
Protein Sci., 29, 2020
1UD6
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BU of 1ud6 by Molmil
Crystal structure of AmyK38 with potassium ion
Descriptor: POTASSIUM ION, amylase
Authors:Nonaka, T, Fujihashi, M, Kita, A, Hagihara, H, Ozaki, K, Ito, S, Miki, K.
Deposit date:2003-04-28
Release date:2003-07-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites
J.Biol.Chem., 278, 2003
3W80
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BU of 3w80 by Molmil
Crystal structure of dodecamer human insulin with double C-axis length of the hexamer 2 Zn insulin cell
Descriptor: Insulin, ZINC ION
Authors:Murayoshi, M, Sasaki, K, Sakabe, N, Sakabe, K.
Deposit date:2013-03-11
Release date:2013-07-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of dodecamer insulin with double C-axis length of the hexamer 2 Zn insulin celll
To be Published
1OD5
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BU of 1od5 by Molmil
Crystal structure of glycinin A3B4 subunit homohexamer
Descriptor: CARBONATE ION, GLYCININ, MAGNESIUM ION
Authors:Adachi, M, Kanamori, J, Masuda, T, Yagasaki, K, Kitamura, K, Mikami, B, Utsumi, S.
Deposit date:2003-02-13
Release date:2003-06-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Soybean 11S Globulin: Glycinin A3B4 Homohexamer
Proc.Natl.Acad.Sci.USA, 100, 2003
4XSA
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BU of 4xsa by Molmil
Determining the Molecular Basis for Starter Unit Selection During Daunorubicin Biosynthesis
Descriptor: Daunorubicin-doxorubicin polyketide synthase
Authors:Jackson, D.R, Valentic, T.R, Tsai, S.C, Patel, A, Mohammed, L, Vasilakis, K, Wattana-amorn, P, Long, P.F, Crump, M.P, Crosby, J.
Deposit date:2015-01-22
Release date:2016-01-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.204 Å)
Cite:Determining the Molecular Basis for Starter Unit Selection During Daunorubicin Biosynthesis
To Be Published
4XS7
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BU of 4xs7 by Molmil
Determining the Molecular Basis for Starter Unit Selection During Daunorubicin Biosynthesis
Descriptor: Daunorubicin-doxorubicin polyketide synthase
Authors:Jackson, D.R, Valentic, T.R, Tsai, S.C, Patel, A, Mohammed, L, Vasilakis, K, Wattana-amorn, P, Long, P.F, Crump, M.P, Crosby, J.
Deposit date:2015-01-22
Release date:2016-01-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Determining the Molecular Basis for Starter Unit Selection During Daunorubicin Biosynthesis
To Be Published
4XSB
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BU of 4xsb by Molmil
Determining the Molecular Basis for Starter Unit Selection During Daunorubicin Biosynthesis
Descriptor: Daunorubicin-doxorubicin polyketide synthase
Authors:Jackson, D.R, Valentic, T.R, Tsai, S.C, Patel, A, Mohammed, L, Vasilakis, K, Wattana-amorn, P, Long, P.F, Crump, M.P, Crosby, J.
Deposit date:2015-01-22
Release date:2016-01-27
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.203 Å)
Cite:Determining the Molecular Basis for Starter Unit Selection During Daunorubicin Biosynthesis
To Be Published
4XS9
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BU of 4xs9 by Molmil
Determining the Molecular Basis for Starter Unit Selection During Daunorubicin Biosynthesis
Descriptor: Daunorubicin-doxorubicin polyketide synthase, N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-[2-(propanoylamino)ethyl]-beta-alaninamide
Authors:Jackson, D.R, Valentic, T.R, Tsai, S.C, Patel, A, Mohammed, L, Vasilakis, K, Wattana-amorn, P, Long, P.F, Crump, M.P, Crosby, J.
Deposit date:2015-01-22
Release date:2016-01-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Determining the Molecular Basis for Starter Unit Selection During Daunorubicin Biosynthesis
To Be Published
5AXV
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BU of 5axv by Molmil
Crystal Structure of Cypovirus Polyhedra R13K Mutant
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Abe, S, Ijiri, H, Negishi, H, Yamanaka, H, Sasaki, K, Hirata, K, Mori, H, Ueno, T.
Deposit date:2015-08-01
Release date:2015-11-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Design of Enzyme-Encapsulated Protein Containers by In Vivo Crystal Engineering
Adv. Mater. Weinheim, 27, 2015
5AXU
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BU of 5axu by Molmil
Crystal Structure of Cypovirus Polyhedra R13A Mutant
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Abe, S, Ijiri, H, Negishi, H, Yamanaka, H, Sasaki, K, Hirata, K, Mori, H, Ueno, T.
Deposit date:2015-08-01
Release date:2015-11-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Design of Enzyme-Encapsulated Protein Containers by In Vivo Crystal Engineering
Adv. Mater. Weinheim, 27, 2015
5XBQ
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BU of 5xbq by Molmil
Peroxiredoxin from Pyrococcus horikoshii (6m mutant)
Descriptor: Peroxiredoxin
Authors:Nakamura, T, Uegaki, K.
Deposit date:2017-03-21
Release date:2018-01-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Alteration of molecular assembly of peroxiredoxins from hyperthermophilic archaea
J. Biochem., 162, 2017
3EFF
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BU of 3eff by Molmil
The Crystal Structure of Full-Length KcsA in its Closed Conformation
Descriptor: FAB, Voltage-gated potassium channel
Authors:Uysal, S, Vasquez, V, Tereshko, T, Esaki, K, Fellouse, F.A, Sidhu, S.S, Koide, S, Perozo, E, Kossiakoff, A.
Deposit date:2008-09-08
Release date:2009-04-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Crystal structure of full-length KcsA in its closed conformation.
Proc.Natl.Acad.Sci.USA, 106, 2009
2RUJ
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BU of 2ruj by Molmil
Solution structure of MTSL spin-labeled Schizosaccharomyces pombe Sin1 CRIM domain
Descriptor: Stress-activated map kinase-interacting protein 1
Authors:Furuita, K, Kataoka, S, Sugiki, T, Kobayashi, N, Ikegami, T, Shiozaki, K, Fujiwara, T, Kojima, C.
Deposit date:2014-07-24
Release date:2015-07-29
Method:SOLUTION NMR
Cite:Utilization of paramagnetic relaxation enhancements for high-resolution NMR structure determination of a soluble loop-rich protein with sparse NOE distance restraints
J.Biomol.Nmr, 61, 2015
2RVK
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BU of 2rvk by Molmil
Refined solution structure of Schizosaccharomyces pombe Sin1 CRIM domain
Descriptor: Stress-activated map kinase-interacting protein 1
Authors:Furuita, K, Kataoka, S, Shiozaki, K, Kojima, C.
Deposit date:2015-12-10
Release date:2017-01-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Substrate specificity of TOR complex 2 is determined by a ubiquitin-fold domain of the Sin1 subunit.
Elife, 6, 2017
3W7Y
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BU of 3w7y by Molmil
0.92A structure of 2Zn human insulin at 100K
Descriptor: Insulin, ZINC ION
Authors:Sakabe, N, Sakabe, K, Sasaki, K, Murayoshi, M.
Deposit date:2013-03-11
Release date:2013-07-03
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (0.92 Å)
Cite:0.92A structure of 2Zn human insulin at 100K
To be Published

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