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PDB: 89346 results

3LID
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BU of 3lid by Molmil
Crystal Structure of the extracellular domain of the putative histidine kinase vpHK1S-Z8
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PHOSPHATE ION, ...
Authors:Zhang, Z, Hendrickson, W.A.
Deposit date:2010-01-24
Release date:2010-05-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural characterization of the predominant family of histidine kinase sensor domains.
J.Mol.Biol., 400, 2010
6ERO
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BU of 6ero by Molmil
Structure of human TFB2M
Descriptor: CHLORIDE ION, Dimethyladenosine transferase 2, mitochondrial,Dimethyladenosine transferase 2, ...
Authors:Hillen, H.S, Morozov, Y.I, Sarfallah, A, Temiakov, D, Cramer, P.
Deposit date:2017-10-18
Release date:2017-11-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis of Mitochondrial Transcription Initiation.
Cell, 171, 2017
5IUQ
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BU of 5iuq by Molmil
Galectin-3c in complex with Bisamido-thiogalactoside derivative 4
Descriptor: 3-deoxy-3-[(2,3,5,6-tetrafluoro-4-methoxybenzene-1-carbonyl)amino]-beta-D-galactopyranosyl 3-deoxy-3-[(2,3,5,6-tetrafluoro-4-methoxybenzene-1-carbonyl)amino]-1-thio-beta-D-galactopyranoside, Galectin-3
Authors:Noresson, A.-L, Aurelius, O, Oberg, C.T, Engstrom, O, Sundin, A.P, Hakansson, M, Logan, D.T, Leffler, H, Nilsson, U.J.
Deposit date:2016-03-18
Release date:2017-03-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.121 Å)
Cite:Controlling protein:ligand complex conformation through tuning of arginine-arene interactions: Synthetic and structural studies with 3-benzamido-2-sulfo-galactosides as galectin-3 ligands
To Be Published
3LKP
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BU of 3lkp by Molmil
Crystal Structure of HLA B*3501 in complex with influenza NP418 epitope from 1972 strain
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-35 alpha chain, ...
Authors:Gras, S, Kedzierski, L, Valkenburg, S.A, Liu, Y.C, Denholm, J, Richards, M, Rimmelzwaan, G.F, Doherty, P.C, Turner, S.J, Rossjohn, J, Kedzierska, K.
Deposit date:2010-01-27
Release date:2010-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cross-reactive CD8+ T-cell immunity between the pandemic H1N1-2009 and H1N1-1918 influenza A viruses.
Proc.Natl.Acad.Sci.USA, 107, 2010
3LIV
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BU of 3liv by Molmil
crystal structure of HTLV protease complexed with the inhibitor KNI-10683
Descriptor: (4R)-3-[(2S,3S)-3-[[(2S)-2-[[(2S)-2-azanyl-2-phenyl-ethanoyl]amino]-3,3-dimethyl-butanoyl]amino]-2-hydroxy-4-phenyl-but anoyl]-N-[(2R)-3,3-dimethylbutan-2-yl]-5,5-dimethyl-1,3-thiazolidine-4-carboxamide, Protease
Authors:Satoh, T, Li, M, Nguyen, J, Kiso, Y, Wlodawer, A, Gustchina, A.
Deposit date:2010-01-25
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structures of inhibitor complexes of human T-cell leukemia virus (HTLV-1) protease.
J.Mol.Biol., 401, 2010
4XFP
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BU of 4xfp by Molmil
Crystal Structure of Highly Active Mutant of Bacillus sp. TB-90 Urate Oxidase
Descriptor: 8-AZAXANTHINE, CHLORIDE ION, SULFATE ION, ...
Authors:Hibi, T, Hayashi, Y, Kawamura, A, Itoh, T.
Deposit date:2014-12-28
Release date:2016-01-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Glycine Substitution of Surface Proline 287 Involves Entropic Enhancement of Bacillus sp. TB-90 Uricase Activity
To be published
4XGW
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BU of 4xgw by Molmil
Crystal structure of Escherichia coli Flavin trafficking protein, an FMN transferase, E169K mutant
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, FAD:protein FMN transferase, ...
Authors:Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V.
Deposit date:2015-01-02
Release date:2015-12-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.747 Å)
Cite:Molecular insights into the enzymatic diversity of flavin-trafficking protein (Ftp; formerly ApbE) in flavoprotein biogenesis in the bacterial periplasm.
Microbiologyopen, 5, 2016
1A5N
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BU of 1a5n by Molmil
K217A VARIANT OF KLEBSIELLA AEROGENES UREASE, CHEMICALLY RESCUED BY FORMATE AND NICKEL
Descriptor: FORMIC ACID, NICKEL (II) ION, UREASE (ALPHA SUBUNIT), ...
Authors:Pearson, M.A, Schaller, R.A, Michel, L.O, Karplus, P.A, Hausinger, R.P.
Deposit date:1998-02-17
Release date:1998-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Chemical rescue of Klebsiella aerogenes urease variants lacking the carbamylated-lysine nickel ligand.
Biochemistry, 37, 1998
6I4O
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BU of 6i4o by Molmil
Dodecamer DNA containing the synthetic base pair P-Z
Descriptor: (DCZ)(DG)(DA)(DT)(DP)(DT)(DA)(DZ)(DA)(DT)(DC)(DG3)
Authors:Padroni, G, Reichenbach, L.F, Parkinson, J.A, Burley, G.A.
Deposit date:2018-11-10
Release date:2019-06-12
Last modified:2024-07-03
Method:SOLUTION NMR
Cite:Sequence-Selective Minor Groove Recognition of a DNA Duplex Containing Synthetic Genetic Components.
J.Am.Chem.Soc., 141, 2019
1AAB
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BU of 1aab by Molmil
NMR STRUCTURE OF RAT HMG1 HMGA FRAGMENT
Descriptor: HIGH MOBILITY GROUP PROTEIN
Authors:Hardman, C.H, Broadhurst, R.W, Raine, A.R.C, Grasser, K.D, Thomas, J.O, Laue, E.D.
Deposit date:1995-10-28
Release date:1996-03-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the A-domain of HMG1 and its interaction with DNA as studied by heteronuclear three- and four-dimensional NMR spectroscopy.
Biochemistry, 34, 1995
5XSO
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BU of 5xso by Molmil
Crystal structure of full-length FixJ from B. japonicum crystallized in space group C2221
Descriptor: FORMIC ACID, GLYCEROL, Response regulator FixJ
Authors:Nishizono, Y, Hisano, T, Sawai, H, Shiro, Y, Nakamura, H, Wright, G.S.A, Saeki, A, Hikima, T, Yamamoto, M, Antonyuk, S.V, Hasnain, S.S.
Deposit date:2017-06-14
Release date:2018-05-23
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.778 Å)
Cite:Architecture of the complete oxygen-sensing FixL-FixJ two-component signal transduction system.
Sci Signal, 11, 2018
4Y23
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BU of 4y23 by Molmil
Crystal structure of T399A precursor mutant protein of gamma-glutamyl transpeptidase from Bacillus licheniformis
Descriptor: Gamma glutamyl transpeptidase,Gamma-glutamyltranspeptidase, SODIUM ION
Authors:Pica, A, Merlino, A.
Deposit date:2015-02-09
Release date:2015-11-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:The maturation mechanism of gamma-glutamyl transpeptidases: Insights from the crystal structure of a precursor mimic of the enzyme from Bacillus licheniformis and from site-directed mutagenesis studies.
Biochim.Biophys.Acta, 1864, 2015
7MFW
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BU of 7mfw by Molmil
Drosophila melanogaster Canoe PDZ domain in complex with Echinoid C-terminal region
Descriptor: Canoe,Echinoid
Authors:Slep, K.C, Peifer, M, Byrnes, A.E.
Deposit date:2021-04-11
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Multivalent interactions make adherens junction-cytoskeletal linkage robust during morphogenesis.
J.Cell Biol., 220, 2021
8ASF
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BU of 8asf by Molmil
Crystal structure of Thrombin in complex with macrocycle T1
Descriptor: 5-chloranyl-~{N}-[[(9~{S},15~{R})-8,14,17-tris(oxidanylidene)-3,20-dithia-7,13,16-triazatetracyclo[20.2.2.1^{5,7}.1^{9,13}]octacosa-1(25),22(26),23-trien-15-yl]methyl]thiophene-2-carboxamide, Thrombin heavy chain, Thrombin light chain
Authors:Chinellato, M, Angelini, A, Nielsen, A, Heinis, C, Cendron, L.
Deposit date:2022-08-19
Release date:2024-03-06
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Crystal structure of Thrombin in complex with optimized macrocycles T1 and T3
To Be Published
7A0A
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BU of 7a0a by Molmil
Crystal structure of mouse CSAD in apo form
Descriptor: Cysteine sulfinic acid decarboxylase, SODIUM ION, SULFATE ION
Authors:Mahootchi, E, Raasakka, A, Haavik, J, Kursula, P.
Deposit date:2020-08-07
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structure of cysteine sulphinic acid decarboxylase reveals structural determinants for substrate specificity of pyridoxal phosphate-dependent decarboxylases
To be published
1A5K
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BU of 1a5k by Molmil
K217E VARIANT OF KLEBSIELLA AEROGENES UREASE
Descriptor: UREASE (ALPHA SUBUNIT), UREASE (BETA SUBUNIT), UREASE (GAMMA SUBUNIT)
Authors:Pearson, M.A, Schaller, R.A, Michel, L.O, Karplus, P.A, Hausinger, R.P.
Deposit date:1998-02-17
Release date:1998-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Chemical rescue of Klebsiella aerogenes urease variants lacking the carbamylated-lysine nickel ligand.
Biochemistry, 37, 1998
6EGM
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BU of 6egm by Molmil
Crystal Structure of a de novo Three-stranded Coiled Coil Peptide Containing D-Leu in a d-site Position of a Tris-thiolate Binding Site
Descriptor: Apo-(GRAND CoilSerL16CL19(DLE))3, ZINC ION
Authors:Ruckthong, L, Stuckey, J.A, Pecoraro, V.L.
Deposit date:2018-08-20
Release date:2019-04-03
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:How Outer Coordination Sphere Modifications Can Impact Metal Structures in Proteins: A Crystallographic Evaluation.
Chemistry, 25, 2019
7MON
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BU of 7mon by Molmil
Structure of human RIPK3-MLKL complex
Descriptor: Mixed lineage kinase domain-like protein, N-[4-({2-[(cyclopropanecarbonyl)amino]pyridin-4-yl}oxy)-3-fluorophenyl]-1-(4-fluorophenyl)-2-oxo-1,2-dihydropyridine-3-carboxamide, Receptor-interacting serine/threonine-protein kinase 3
Authors:Meng, Y, Davies, K.A, Czabotar, P.E, Murphy, J.M.
Deposit date:2021-05-03
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Human RIPK3 maintains MLKL in an inactive conformation prior to cell death by necroptosis.
Nat Commun, 12, 2021
3LMT
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BU of 3lmt by Molmil
Crystal structure of DTD from Plasmodium falciparum
Descriptor: D-tyrosyl-tRNA(Tyr) deacylase, IODIDE ION
Authors:Manickam, Y, Bhatt, T.K, Khan, S, Sharma, A.
Deposit date:2010-02-01
Release date:2010-03-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure of D-tyrosyl-tRNATyr deacylase using home-source Cu Kalpha and moderate-quality iodide-SAD data: structural polymorphism and HEPES-bound enzyme states
Acta Crystallogr.,Sect.D, 66, 2010
4XKF
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BU of 4xkf by Molmil
Crystal structure of hemagglutinin from Taiwan (2013) H6N1 influenza virus in complex with LSTa
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain, ...
Authors:Tzarum, N, Zhu, X, Wilson, I.A.
Deposit date:2015-01-11
Release date:2015-03-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.446 Å)
Cite:Structure and Receptor Binding of the Hemagglutinin from a Human H6N1 Influenza Virus.
Cell Host Microbe, 17, 2015
4EFP
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BU of 4efp by Molmil
Bombyx mori lipoprotein 7 isolated from its natural source at 1.33 A resolution
Descriptor: 1,2-ETHANEDIOL, 30kDa protein, CADMIUM ION, ...
Authors:Pietrzyk, A.J, Panjikar, S, Bujacz, A, Mueller-Dieckmann, J, Jaskolski, M, Bujacz, G.
Deposit date:2012-03-30
Release date:2012-08-29
Last modified:2013-01-23
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:High-resolution structure of Bombyx mori lipoprotein 7: crystallographic determination of the identity of the protein and its potential role in detoxification.
Acta Crystallogr.,Sect.D, 68, 2012
7A38
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BU of 7a38 by Molmil
Crystal structure of the c-Src SH3 domain mutant V111L-N113S-T114S-Q128E at pH 6.0
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Proto-oncogene tyrosine-protein kinase Src, SULFATE ION
Authors:Camara-Artigas, A, Plaza-Garrido, M, Salinas-Garcia, M.C.
Deposit date:2020-08-18
Release date:2021-08-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structure of the c-Src SH3 domain mutant V111L-N113S-T114S-Q128E at pH 6.0
To be published
8AZK
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BU of 8azk by Molmil
Bovine 20S proteasome, untreated
Descriptor: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ...
Authors:Szenkier, N, Arie, M, Matzov, D, Sertchook, R, Carmeli, R, Cascio, P, Stanhill, A, Shalev Benami, M, Navon, A.
Deposit date:2022-09-06
Release date:2024-03-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Bovine 20S proteasome, untreated
To be published
6EBK
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BU of 6ebk by Molmil
The voltage-activated Kv1.2-2.1 paddle chimera channel in lipid nanodiscs
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Potassium voltage-gated channel subfamily A member 2,Potassium voltage-gated channel subfamily B member 2 chimera, Voltage-gated potassium channel subunit beta-2
Authors:Matthies, D, Bae, C, Fox, T, Bartesaghi, A, Subramaniam, S, Swartz, K.J.
Deposit date:2018-08-06
Release date:2018-08-22
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Single-particle cryo-EM structure of a voltage-activated potassium channel in lipid nanodiscs.
Elife, 7, 2018
4XVX
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BU of 4xvx by Molmil
Crystal structure of an acyl-ACP dehydrogenase
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, Acyl-[acyl-carrier-protein] dehydrogenase MbtN, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, ...
Authors:Chai, A, Johnston, J.M, Bunker, R.D, Lott, J.S, Baker, E.N, TB Structural Genomics Consortium (TBSGC)
Deposit date:2015-01-28
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A covalent adduct of MbtN, an acyl-ACP dehydrogenase from Mycobacterium tuberculosis, reveals an unusual acyl-binding pocket.
Acta Crystallogr.,Sect.D, 71, 2015

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