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PDB: 88675 results

7NS4
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BU of 7ns4 by Molmil
Catalytic module of yeast Chelator-GID SR4 E3 ubiquitin ligase
Descriptor: E3 ubiquitin-protein ligase RMD5, Protein FYV10, ZINC ION
Authors:Sherpa, D, Chrustowicz, J, Prabu, J.R, Schulman, B.A.
Deposit date:2021-03-05
Release date:2021-05-05
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:GID E3 ligase supramolecular chelate assembly configures multipronged ubiquitin targeting of an oligomeric metabolic enzyme.
Mol.Cell, 81, 2021
5IUX
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BU of 5iux by Molmil
GLIC-V135C bimane labelled X-ray structure
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2,3,5,6-tetramethyl-1H,7H-pyrazolo[1,2-a]pyrazole-1,7-dione, ACETATE ION, ...
Authors:Fourati, Z, Menny, A, Delarue, M.
Deposit date:2016-03-18
Release date:2017-03-29
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of a pre-active conformation of a pentameric channel receptor.
Elife, 6, 2017
5J42
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BU of 5j42 by Molmil
Crystal structure of m2hTDP2-CAT in complex with a small molecule inhibitor
Descriptor: 1,2-ETHANEDIOL, 10-(4-hydroxyphenyl)-2,4-dioxo-2,3,4,10-tetrahydropyrimido[4,5-b]quinoline-8-carbonitrile, GLYCEROL, ...
Authors:Hornyak, P, Pearl, L.H, Caldecott, K.W, Oliver, A.W.
Deposit date:2016-03-31
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mode of action of DNA-competitive small molecule inhibitors of tyrosyl DNA phosphodiesterase 2.
Biochem.J., 473, 2016
7BIO
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BU of 7bio by Molmil
Crystal structure of monooxygenase RslO4 from Streptomyces bottropensis
Descriptor: ACETATE ION, ETHANOL, Monooxygenase/putative anthronoxygenase, ...
Authors:Zhang, L, Zuo, C, Alali, A, Bechthold, A, Einsle, O.
Deposit date:2021-01-12
Release date:2021-01-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.795 Å)
Cite:Biosynthesis of the Tricyclic Aromatic Type II Polyketide Rishirilide: New Potential Third Ring Oxygenation after Three Cyclization Steps.
Mol Biotechnol., 63, 2021
6N05
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BU of 6n05 by Molmil
Structure of anti-crispr protein, AcrIIC2
Descriptor: AcrIIC2
Authors:Shah, M, Thavalingham, A, Maxwell, K.L, Moraes, T.F.
Deposit date:2018-11-06
Release date:2019-06-05
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Inhibition of CRISPR-Cas9 ribonucleoprotein complex assembly by anti-CRISPR AcrIIC2.
Nat Commun, 10, 2019
7QDH
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BU of 7qdh by Molmil
SARS-CoV-2 S protein S:D614G mutant 1-up
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin
Authors:Ginex, T, Marco-Marin, C, Wieczor, M, Mata, C.P, Krieger, J, Lopez-Redondo, M.L, Frances-Gomez, C, Ruiz-Rodriguez, P, Melero, R, Sanchez-Sorzano, C.O, Martinez, M, Gougeard, N, Forcada-Nadal, A, Zamora-Caballero, S, Gozalbo-Rovira, R, Sanz-Frasquet, C, Bravo, J, Rubio, V, Marina, A, Geller, R, Comas, I, Gil, C, Coscolla, M, Orozco, M, LLacer, J.L, Carazo, J.M.
Deposit date:2021-11-27
Release date:2022-05-25
Last modified:2022-08-10
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:The structural role of SARS-CoV-2 genetic background in the emergence and success of spike mutations: The case of the spike A222V mutation.
Plos Pathog., 18, 2022
6Y3H
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BU of 6y3h by Molmil
NMR solution structure of the hazelnut allergen Cor a 1.0401
Descriptor: Major allergen Cor a 1.0401
Authors:Fuehrer, S, Kamenik, A.S, Zeindl, R, Nothegger, B, Hofer, F, Reider, N, Liedl, K.R, Tollinger, M.
Deposit date:2020-02-18
Release date:2021-02-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Inverse relation between structural flexibility and IgE reactivity of Cor a 1 hazelnut allergens.
Sci Rep, 11, 2021
6FX8
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BU of 6fx8 by Molmil
The X-ray structure of the ferritin nanocage containing Au and Pt, obtained upon encapsulation of a single heterobimetallic compound within the protein cage (rotating anode data)
Descriptor: CADMIUM ION, CHLORIDE ION, Ferritin light chain, ...
Authors:Merlino, A, Ferraro, G.
Deposit date:2018-03-08
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Caged noble metals: Encapsulation of a cytotoxic platinum(II)-gold(I) compound within the ferritin nanocage.
Int. J. Biol. Macromol., 115, 2018
8C8N
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BU of 8c8n by Molmil
In situ structure of the Nitrosopumilus maritimus S-layer - Two-fold symmetry (C2)
Descriptor: Cell surface protein
Authors:von Kuegelgen, A, Bharat, T.
Deposit date:2023-01-20
Release date:2024-04-10
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Membraneless channels sieve cations in ammonia-oxidizing marine archaea.
Nature, 630, 2024
6T0H
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BU of 6t0h by Molmil
Crystal structure of CYP124 in complex with 1-alpha-hydroxy-vitamin D3
Descriptor: 1-alpha-hydroxy-vitamin D3, CHLORIDE ION, CYP124 in complex with inhibitor carbethoxyhexyl imidazole, ...
Authors:Bukhdruker, S, Marin, E, Varaksa, T, Gilep, A, Strushkevich, N, Borshchevskiy, V.
Deposit date:2019-10-03
Release date:2020-10-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Metabolic Fate of Human Immunoactive Sterols in Mycobacterium tuberculosis.
J.Mol.Biol., 433, 2021
6PM7
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BU of 6pm7 by Molmil
The structure of the triclinic crystal form of beef liver catalase at 1.85 A resolution
Descriptor: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
Authors:McPherson, A.
Deposit date:2019-07-01
Release date:2020-05-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The structure of the triclinic crystal form of beef liver catalase at 1.85 A resolution
to be published
7QEZ
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BU of 7qez by Molmil
Crystal structure of the SARS-CoV-2 RBD in complex with the ultrapotent antibody CV2.1169 and CR3022
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CR3022 heavy chain, CR3022 light chain, ...
Authors:Fernandez, I, Rey, F.A.
Deposit date:2021-12-03
Release date:2022-05-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Potent human broadly SARS-CoV-2-neutralizing IgA and IgG antibodies effective against Omicron BA.1 and BA.2.
J.Exp.Med., 219, 2022
6FP4
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BU of 6fp4 by Molmil
Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 1,8-Naphthyridine-2-carboxylic acid
Descriptor: (2R)-2-hydroxy-3-[4-(2-hydroxyethyl)piperazin-1-yl]propane-1-sulfonic acid, 1,8-naphthyridine-2-carboxylic acid, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Silvestri, I, Fata, F, MIele, A.E, Boumis, G, Williams, D.L, Angelucci, F.
Deposit date:2018-02-09
Release date:2018-06-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Fragment-Based Discovery of a Regulatory Site in Thioredoxin Glutathione Reductase Acting as "Doorstop" for NADPH Entry.
ACS Chem. Biol., 13, 2018
8C8O
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BU of 8c8o by Molmil
In situ structure of the Nitrosopumilus maritimus S-layer - Six-fold symmetry (C6)
Descriptor: Cell surface protein
Authors:von Kuegelgen, A, Bharat, T.
Deposit date:2023-01-20
Release date:2024-04-17
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Membraneless channels sieve cations in ammonia-oxidizing marine archaea.
Nature, 630, 2024
8FMX
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BU of 8fmx by Molmil
Langya virus F glycoprotein ectodomain in prefusion form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Low, Y.S, Isaacs, A, Modhiran, N, Watterson, D.
Deposit date:2022-12-26
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Structure and antigenicity of divergent Henipavirus fusion glycoproteins.
Nat Commun, 14, 2023
8C6M
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BU of 8c6m by Molmil
Human protein kinase CK2 alpha in complex with CK2-TN02
Descriptor: (5~{Z})-5-[(3-methoxy-4-oxidanyl-phenyl)methylidene]-1,3-thiazolidine-2,4-dione, Casein kinase II subunit alpha, SULFATE ION
Authors:Dalle Vedove, A, Cazzanelli, G, Lolli, G.
Deposit date:2023-01-12
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Switching off CK2-mediated activation of survivin offers new therapeutic opportunities in neuroblastoma
to be published
6Y0B
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BU of 6y0b by Molmil
Crystal structure of the cAMP-dependent protein kinase A cocrystallized with quinazolin-4-amine and PKI (5-24)
Descriptor: DIMETHYL SULFOXIDE, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha, ...
Authors:Oebbeke, M, Wienen-Schmidt, B, Heine, A, Klebe, G.
Deposit date:2020-02-07
Release date:2021-02-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Fragment based drug design - Small chemical changes of fragments effecting big changes in binding
To Be Published
5NJR
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BU of 5njr by Molmil
Mix-and-diffuse serial synchrotron crystallography: structure of N,N',N''-Triacetylchitotriose bound to Lysozyme with 50s time-delay, phased with 4ET8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Lysozyme C, ...
Authors:Oberthuer, D, Meents, A, Beyerlein, K.R, Chapman, H.N, Lieseke, J.
Deposit date:2017-03-29
Release date:2017-10-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mix-and-diffuse serial synchrotron crystallography.
IUCrJ, 4, 2017
8C6L
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BU of 8c6l by Molmil
Human protein kinase CK2 alpha in complex with CK2-TN01
Descriptor: 1,2-ETHANEDIOL, 5-azanyl-3-[(~{Z})-1-cyano-2-(3-methoxy-4-oxidanyl-phenyl)ethenyl]-3~{H}-pyrazole-4-carbonitrile, Casein kinase II subunit alpha, ...
Authors:Dalle Vedove, A, Cazzanelli, G, Lolli, G.
Deposit date:2023-01-12
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Switching off CK2-mediated activation of survivin offers new therapeutic opportunities in neuroblastoma
to be published
8U0Z
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BU of 8u0z by Molmil
CRYSTAL STRUCTURE OF THE OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE DOMAIN OF Coffea arabica UMP SYNTHASE
Descriptor: 1,2-ETHANEDIOL, ANY 5'-MONOPHOSPHATE NUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Hinojosa-Cruz, A, Diaz-Vilchis, A, Gonzalez-Segura, L.
Deposit date:2023-08-29
Release date:2024-01-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.399 Å)
Cite:Structural and functional properties of uridine 5'-monophosphate synthase from Coffea arabica.
Int.J.Biol.Macromol., 259, 2024
6Y3L
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BU of 6y3l by Molmil
NMR solution structure of the hazelnut allergen Cor a 1.0404
Descriptor: Major allergen variant Cor a 1.0404
Authors:Fuehrer, S, Kamenik, A.S, Zeindl, R, Nothegger, B, Hofer, F, Reider, N, Liedl, K.R, Tollinger, M.
Deposit date:2020-02-18
Release date:2021-02-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Inverse relation between structural flexibility and IgE reactivity of Cor a 1 hazelnut allergens.
Sci Rep, 11, 2021
8C6N
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BU of 8c6n by Molmil
Human protein kinase CK2 alpha in complex with CK2-TN03
Descriptor: (2~{Z},5~{Z})-5-[(4-methoxy-3-oxidanyl-phenyl)methylidene]-2-phenylimino-1,3-thiazolidin-4-one, Casein kinase II subunit alpha, SULFATE ION
Authors:Dalle Vedove, A, Cazzanelli, G, Lolli, G.
Deposit date:2023-01-12
Release date:2024-04-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Switching off CK2-mediated activation of survivin offers new therapeutic opportunities in neuroblastoma
to be published
5JRF
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BU of 5jrf by Molmil
Crystal structure of the light-driven sodium pump KR2 bound with iodide ions
Descriptor: EICOSANE, IODIDE ION, Sodium pumping rhodopsin
Authors:Melnikov, I, Polovinkin, V, Kovalev, K, Shevchenko, V, Gushchin, I, Popov, A, Gordeliy, V.
Deposit date:2016-05-06
Release date:2017-05-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Fast iodide-SAD phasing for high-throughput membrane protein structure determination.
Sci Adv, 3, 2017
8FMY
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BU of 8fmy by Molmil
Mojiang virus F ectodomain in prefusion form
Descriptor: Fusion glycoprotein F0
Authors:Low, Y.S, Isaacs, A, Modhiran, N, Watterson, D.
Deposit date:2022-12-26
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Structure and antigenicity of divergent Henipavirus fusion glycoproteins.
Nat Commun, 14, 2023
6MUV
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BU of 6muv by Molmil
The structure of the Plasmodium falciparum 20S proteasome in complex with two PA28 activators
Descriptor: 20S proteasome alpha-1 subunit, 20S proteasome alpha-2 subunit, 20S proteasome alpha-3 subunit, ...
Authors:Metcalfe, R.D, Xie, S.C, Hanssen, E, Gillett, D.L, Leis, A.P, Tilley, L, Griffin, M.D.W.
Deposit date:2018-10-23
Release date:2019-08-07
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The structure of the PA28-20S proteasome complex from Plasmodium falciparum and implications for proteostasis.
Nat Microbiol, 4, 2019

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PDB entries from 2024-07-31

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