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PDB: 89774 results

4WAA
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BU of 4waa by Molmil
Crystal structure of Nix LIR-fused human LC3B_2-119
Descriptor: Microtubule-associated proteins 1A/1B light chain 3B
Authors:Suzuki, H, Ravichandran, A.C, Dobson, R.C.J, Novak, I, Wakatsuki, S.
Deposit date:2014-08-29
Release date:2015-09-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Phosphorylation of the mitochondrial autophagy receptor Nix enhances its interaction with LC3 proteins.
Sci Rep, 7, 2017
7NTM
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BU of 7ntm by Molmil
Cryo-EM structure of S.cerevisiae native alcohol dehydrogenase 1 (ADH1) in its tetrameric apo state
Descriptor: Alcohol dehydrogenase 1, ZINC ION
Authors:Nzigou Mandouckou, J.A, Carroni, M, Haeggstrom, J.Z, Thulasingam, M.
Deposit date:2021-03-10
Release date:2022-10-12
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Cryo-EM structure of S.cerevisiae native alcohol dehydrogenase 1 (ADH1) in its tetrameric apo state
To Be Published
4UXF
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BU of 4uxf by Molmil
Crystal structure of the carboxy-terminal region of the bacteriophage T4 proximal long tail fibre protein gp34, P21 native crystal
Descriptor: GLYCEROL, LARGE TAIL FIBER PROTEIN P34
Authors:Granell, M, Alvira, S, Garcia-Doval, C, Singh, A.K, van Raaij, M.J.
Deposit date:2014-08-22
Release date:2015-12-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Carboxy-Terminal Region of the Bacteriophage T4 Proximal Long Tail Fiber Protein Gp34.
Viruses, 9, 2017
4V0G
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BU of 4v0g by Molmil
JAK3 in complex with a covalent EGFR inhibitor
Descriptor: N-[3-(2-{3-amino-6-[1-(1-methylpiperidin-4-yl)-1H-pyrazol-4-yl]pyrazin-2-yl}-1H-benzimidazol-1-yl)phenyl]propanamide, TYROSINE-PROTEIN KINASE JAK3
Authors:Debreczeni, J.E, Hennessy, E.J, Chuaquini, C, Ashton, S, Coclough, N, Cross, D.A.E, Eberlein, C, Gingipalli, L, Klinowska, T.C.M, Orme, J.P, Sha, L, Wu, X.
Deposit date:2014-09-16
Release date:2016-01-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Utilisation of Structure Based Design to Identify Novel, Irreversible Inhibitors of the Epidermal Growth Factor Receptor (Egfr) Harboring the Gatekeeper T790M Mutation
To be Published
6KSY
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BU of 6ksy by Molmil
Crystal structure of arginase from Zymomonas mobilis ZM4
Descriptor: Arginase/agmatinase/formiminoglutamase, ZINC ION
Authors:Park, S.Y, Hwangbo, S.A.
Deposit date:2019-08-26
Release date:2020-08-05
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.649 Å)
Cite:Characterization of a Dimeric Arginase FromZymomonas mobilisZM4.
Front Microbiol, 10, 2019
6KSG
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BU of 6ksg by Molmil
Vibrio cholerae Methionine Aminopeptidase in holo form
Descriptor: GLYCEROL, Methionine aminopeptidase, NICKEL (II) ION, ...
Authors:Pillalamarri, V, Addlagatta, A.
Deposit date:2019-08-23
Release date:2020-08-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Methionine aminopeptidases with short sequence inserts within the catalytic domain are differentially inhibited: Structural and biochemical studies of three proteins from Vibrio spp.
Eur.J.Med.Chem., 209, 2020
7P7D
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BU of 7p7d by Molmil
Rabbit muscle Glycogen Phosphorylase T state
Descriptor: DIMETHYL SULFOXIDE, Glycogen phosphorylase, muscle form
Authors:Stravodimos, G.A, Leonidas, D.D.
Deposit date:2021-07-19
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Glycogen phosphorylase revisited: extending the resolution of the R- and T-state structures of the free enzyme and in complex with allosteric activators.
Acta Crystallogr.,Sect.F, 77, 2021
6KRH
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BU of 6krh by Molmil
Structural basis for domain rotation during adenylation of active site K123 and fragment library screening against NAD+ -dependent DNA ligase from Mycobacterium tuberculosis
Descriptor: ADENOSINE MONOPHOSPHATE, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase A, ...
Authors:Ramachandran, R, Shukla, A, Afsar, M.
Deposit date:2019-08-21
Release date:2020-08-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Salt bridges at the subdomain interfaces of the adenylation domain and active-site residues of Mycobacterium tuberculosis NAD + -dependent DNA ligase A (MtbLigA) are important for the initial steps of nick-sealing activity.
Acta Crystallogr D Struct Biol, 77, 2021
6F61
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BU of 6f61 by Molmil
NMR structure of purotoxin-6
Descriptor: purotoxin-6
Authors:Nadezhdin, K.D, Oparin, P.B, Vassilevski, A.A, Arseniev, A.S, Grishin, E.V.
Deposit date:2017-12-04
Release date:2018-12-19
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:NMR structure of purotoxin-6
To Be Published
7P8K
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BU of 7p8k by Molmil
Crystal structure of in planta processed AvrRps4 in complex with the WRKY domain of RRS1
Descriptor: Avirulence protein,Avirulence protein, Disease resistance protein RRS1, ZINC ION
Authors:Mukhi, N, Brown, H, Gorenkin, D, Ding, P, Bentham, A.R, Jones, J.D.G, Banfield, M.J.
Deposit date:2021-07-23
Release date:2021-08-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Perception of structurally distinct effectors by the integrated WRKY domain of a plant immune receptor.
Proc.Natl.Acad.Sci.USA, 118, 2021
7QRZ
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BU of 7qrz by Molmil
Crystal structure of B30.2 PRYSPRY domain of MID2
Descriptor: 1,2-ETHANEDIOL, Probable E3 ubiquitin-protein ligase MID2, SULFATE ION
Authors:Chaikuad, A, Zhubi, R, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2022-01-12
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystal structure of B30.2 PRYSPRY domain of MID2
To Be Published
7QS2
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BU of 7qs2 by Molmil
Crystal structure of B30.2 PRYSPRY domain of TRIM15
Descriptor: 1,2-ETHANEDIOL, IODIDE ION, TRIM15
Authors:Chaikuad, A, Zhubi, R, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2022-01-12
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of B30.2 PRYSPRY domain of TRIM15
To Be Published
7QS3
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BU of 7qs3 by Molmil
Crystal structure of B30.2 PRYSPRY domain of TRIM16
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Tripartite motif-containing protein 16
Authors:Chaikuad, A, Zhubi, R, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2022-01-12
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of B30.2 PRYSPRY domain of TRIM16
To Be Published
7OW9
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BU of 7ow9 by Molmil
Crystal structure of a staphylococcal orthologue of CYP134A1 (CYPX) in complex with Cyclo-L-leucyl-L-leucine
Descriptor: (3S,6S)-3,6-bis(2-methylpropyl)piperazine-2,5-dione, CYPX, NITRATE ION, ...
Authors:Snee, M, Levy, C, Leys, D, Katariya, M, Munro, A.W.
Deposit date:2021-06-17
Release date:2021-08-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a staphylococcal orthologue of CYP134A1 (CYPX) in complex with Cyclo-L-leucyl-L-leucine
To Be Published
5PHM
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BU of 5phm by Molmil
PanDDA analysis group deposition -- Crystal Structure of JMJD2D in complex with N09455a
Descriptor: 1,2-ETHANEDIOL, Lysine-specific demethylase 4D, N-OXALYLGLYCINE, ...
Authors:Pearce, N.M, Krojer, T, Talon, R, Bradley, A.R, Fairhead, M, Sethi, R, Wright, N, MacLean, E, Collins, P, Brandao-Neto, J, Douangamath, A, Renjie, Z, Dias, A, Vollmar, M, Ng, J, Szykowska, A, Burgess-Brown, N, Brennan, P.E, Cox, O, Oppermann, U, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F.
Deposit date:2017-02-07
Release date:2017-03-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.398 Å)
Cite:A multi-crystal method for extracting obscured crystallographic states from conventionally uninterpretable electron density.
Nat Commun, 8, 2017
5AMN
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BU of 5amn by Molmil
The Discovery of 2-Substituted Phenol Quinazolines as Potent and Selective RET Kinase Inhibitors
Descriptor: 4-[3-HYDROXYANILINO]-6,7-DIMETHOXYQUINAZOLINE, FORMIC ACID, PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPTOR RET
Authors:Newton, R, Bowler, K, Burns, E.M, Chapman, P, Fairweather, E, Fritzl, S, Goldberg, K, Hamilton, N.M, Holt, S.V, Hopkins, G.V, Jones, S.D, Jordan, A.M, Lyons, A, McDonald, N.Q, Maguire, L.A, Mould, D.P, Purkiss, A.G, Small, H.F, Stowell, A, Thomson, G.J, Waddell, I.D, Waszkowycz, B, Watson, A.J, Ogilvie, D.J.
Deposit date:2015-03-11
Release date:2016-02-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:The discovery of 2-substituted phenol quinazolines as potent RET kinase inhibitors with improved KDR selectivity.
Eur J Med Chem, 112, 2016
7Q3R
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BU of 7q3r by Molmil
Crystal structure of SARS-CoV-2 RBD in complex with the neutralizing nanobodies VHH-F04 and VHH-G09
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Spike glycoprotein, ...
Authors:Fernandez, I, Pederzoli, R, Rey, F.A.
Deposit date:2021-10-28
Release date:2022-11-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:NANOBODIES AGAINST SARS-COV-2 NEUTRALIZE VARIANTS OF CONCERN AND EXPLORE CONFORMATIONAL DIFFERENCES ON THE SPIKE PROTEIN
To Be Published
6KO8
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BU of 6ko8 by Molmil
Crystal structure of the Cholic acid bound RamR determined with XtaLAB Synergy
Descriptor: CHOLIC ACID, Putative regulatory protein, SULFATE ION
Authors:Matsumoto, T, Nakashima, R, Yamano, A, Nishino, K.
Deposit date:2019-08-08
Release date:2019-10-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Development of a structure determination method using a multidrug-resistance regulator protein as a framework.
Biochem.Biophys.Res.Commun., 518, 2019
6FF1
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BU of 6ff1 by Molmil
CsoZ metallochaperone
Descriptor: CALCIUM ION, CsoZ
Authors:Pelicioli-Riboldi, G, Basle, A, Waldron, K.
Deposit date:2018-01-03
Release date:2019-01-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The copper homeostasis system of Staphylococcus aureus: Two putative metallochaperones with contrasting copper binding properties.
To Be Published
8Q4F
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BU of 8q4f by Molmil
Structure of arbekacin bound Escherichia coli 70S ribosome
Descriptor: 16S rRNA, 23S rRNA, 50S ribosomal protein L16, ...
Authors:Majumdar, S, Parajuli, N.P, Ge, X, Emmerich, A, Sanyal, S.
Deposit date:2023-08-06
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of arbekacin bound Escherichia coli 70S ribosome
To be published
7TVD
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BU of 7tvd by Molmil
Crystal structure of the kinase domain of EGFR exon-19 (del-747-749) mutant
Descriptor: Epidermal growth factor receptor
Authors:Ashtekar, K.D, Stayrook, S.E, Lemmon, M.A.
Deposit date:2022-02-04
Release date:2022-02-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Biochemical and structural basis for differential inhibitor sensitivity of EGFR with distinct exon 19 mutations.
Nat Commun, 13, 2022
4X5U
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BU of 4x5u by Molmil
X-ray crystal structure of CagL at pH 4.2
Descriptor: Cag pathogenicity island protein (Cag18)
Authors:Sundberg, E.J, Bonsor, D.A, Diederichs, K.
Deposit date:2014-12-05
Release date:2015-04-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Integrin Engagement by the Helical RGD Motif of the Helicobacter pylori CagL Protein Is Regulated by pH-induced Displacement of a Neighboring Helix.
J.Biol.Chem., 290, 2015
5C7K
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BU of 5c7k by Molmil
Crystal structure BG505 SOSIP gp140 HIV-1 Env trimer bound to broadly neutralizing antibodies PGT128 and 8ANC195
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody Fab 8ANC195 heavy chain, ...
Authors:Kong, L, Stanfield, R.L, Wilson, I.A.
Deposit date:2015-06-24
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.6019 Å)
Cite:Complete epitopes for vaccine design derived from a crystal structure of the broadly neutralizing antibodies PGT128 and 8ANC195 in complex with an HIV-1 Env trimer.
Acta Crystallogr.,Sect.D, 71, 2015
6L2C
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BU of 6l2c by Molmil
Crystal structure of Aspergillus fumigatus mitochondrial acetyl-CoA acetyltransferase in complex with CoA
Descriptor: Acetyl-CoA-acetyltransferase, putative, COENZYME A
Authors:Zhang, Y, Wei, W, Raimi, O.G, Ferenbach, A.T, Fang, W.
Deposit date:2019-10-03
Release date:2020-02-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Aspergillus fumigatus Mitochondrial Acetyl Coenzyme A Acetyltransferase as an Antifungal Target.
Appl.Environ.Microbiol., 86, 2020
5CU1
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BU of 5cu1 by Molmil
Crystal structure of DMSP lyase DddQ from Ruegeria pomeroyi DSS-3
Descriptor: DMSP lyase, FE (III) ION
Authors:Chong, S.Y, Moran, M.A, Lanzilotta, W.N, Whitman, W.B.
Deposit date:2015-07-24
Release date:2016-08-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:To be Published
To Be Published

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PDB entries from 2024-11-06

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