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PDB: 89346 results

8U4Z
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BU of 8u4z by Molmil
Klebsiella pneumoniae encapsulin-associated DyP peroxidase
Descriptor: Family 1 encapsulin-associated DyP peroxidase, Mesoheme
Authors:Andreas, M.P, Jones, J.A, Giessen, T.W.
Deposit date:2023-09-11
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (2.39 Å)
Cite:Structural basis for peroxidase encapsulation inside the encapsulin from the Gram-negative pathogen Klebsiella pneumoniae.
Nat Commun, 15, 2024
2QYZ
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BU of 2qyz by Molmil
Crystal structure of the uncharacterized protein CTC02137 from Clostridium tetani E88
Descriptor: Uncharacterized protein
Authors:Malashkevich, V.N, Toro, R, Meyer, A.J, Sauder, J.M, Wasserman, T, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-08-15
Release date:2007-08-28
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of the uncharacterized protein CTC02137 from Clostridium tetani E88.
To be Published
5EPJ
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BU of 5epj by Molmil
Crystal Structure of chromodomain of CBX7 in complex with inhibitor UNC3866
Descriptor: Chromobox protein homolog 7, UNKNOWN ATOM OR ION, peptide-like inhibitor UNC3866
Authors:Liu, Y, Tempel, W, Walker, J.R, Stuckey, J.I, Dickson, B.M, James, L.I, Frye, S.V, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2015-11-11
Release date:2015-12-16
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of chromodomain of CBX7 in complex with inhibitor UNC3866
to be published
8TTF
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BU of 8ttf by Molmil
NorA double mutant - E222QD307N at pH 7.5
Descriptor: Heavy Chain of FabDA1 Variable Domain, Light Chain of FabDA1 Variable Domain, Quinolone resistance protein NorA
Authors:Li, J.P, Li, Y, Koide, A, Kuang, H.H, Torres, V.J, Koide, S, Wang, D.N, Traaseth, N.J.
Deposit date:2023-08-13
Release date:2024-05-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:Proton-coupled transport mechanism of the efflux pump NorA.
Nat Commun, 15, 2024
8TNW
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BU of 8tnw by Molmil
Substrate Binding Plasticity Revealed by Cryo-EM Structures of SLC26A2
Descriptor: CHLORIDE ION, Sulfate transporter
Authors:Hu, W, Song, A.
Deposit date:2023-08-02
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Substrate binding plasticity revealed by Cryo-EM structures of SLC26A2.
Nat Commun, 15, 2024
4WD0
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BU of 4wd0 by Molmil
Crystal structure of HisAp form Arthrobacter aurescens
Descriptor: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
Authors:MICHALSKA, K, VERDUZCO-CASTRO, E.A, ENDRES, M, BARONA-GOMEZ, F, JOACHIMIAK, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-05
Release date:2014-09-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of HisAp form Arthrobacter aurescens
To Be Published
8TTE
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BU of 8tte by Molmil
Protonated state of NorA at pH 5.0
Descriptor: FabDA1 CDRH3 loop, Quinolone resistance protein NorA
Authors:Li, J.P, Li, Y, Koide, A, Kuang, H.H, Torres, V.J, Koide, S, Wang, D.N, Traaseth, N.J.
Deposit date:2023-08-13
Release date:2024-05-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Proton-coupled transport mechanism of the efflux pump NorA.
Nat Commun, 15, 2024
8TNX
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BU of 8tnx by Molmil
Substrate Binding Plasticity Revealed by Cryo-EM Structures of SLC26A2
Descriptor: OXALATE ION, Sulfate transporter
Authors:Hu, W, Song, A.
Deposit date:2023-08-02
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Substrate binding plasticity revealed by Cryo-EM structures of SLC26A2.
Nat Commun, 15, 2024
8TTG
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BU of 8ttg by Molmil
NorA single mutant - E222Q at pH 7.5
Descriptor: FabDA1 CDRH3 loop, Quinolone resistance protein NorA
Authors:Li, J.P, Li, Y, Koide, A, Kuang, H.H, Torres, V.J, Koide, S, Wang, D.N, Traaseth, N.J.
Deposit date:2023-08-13
Release date:2024-05-29
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Proton-coupled transport mechanism of the efflux pump NorA.
Nat Commun, 15, 2024
8TNY
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BU of 8tny by Molmil
Substrate Binding Plasticity Revealed by Cryo-EM Structures of SLC26A2
Descriptor: SULFATE ION, Sulfate transporter
Authors:Hu, W, Song, A.
Deposit date:2023-08-02
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:Substrate binding plasticity revealed by Cryo-EM structures of SLC26A2.
Nat Commun, 15, 2024
8U2Y
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BU of 8u2y by Molmil
Solution structure of the PHD6 finger of MLL4 bound to TET3
Descriptor: Histone-lysine N-methyltransferase 2D, Methylcytosine dioxygenase TET3, ZINC ION
Authors:Mohid, S.A, Zandian, M, Zhang, Y, Kutateladze, T.G.
Deposit date:2023-09-06
Release date:2024-06-19
Method:SOLUTION NMR
Cite:MLL4 binds TET3.
Structure, 32, 2024
2QSW
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BU of 2qsw by Molmil
Crystal structure of C-terminal domain of ABC transporter / ATP-binding protein from Enterococcus faecalis
Descriptor: GLYCEROL, Methionine import ATP-binding protein metN 2, ZINC ION
Authors:Osipiuk, J, Bigelow, L, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-07-31
Release date:2007-08-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:X-ray structure of C-terminal domain of ABC transporter / ATP-binding protein from Enterococcus faecalis.
To be Published
4V30
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BU of 4v30 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Lenalidomide
Descriptor: CEREBLON ISOFORM 4, S-Lenalidomide, ZINC ION
Authors:Hartmann, M.D, Lupas, A.N, Hernandez Alvarez, B.
Deposit date:2014-10-15
Release date:2014-12-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Thalidomide Mimics Uridine Binding to an Aromatic Cage in Cereblon.
J.Struct.Biol., 188, 2014
4V32
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BU of 4v32 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Thalidomide, Y101F mutant
Descriptor: CEREBLON ISOFORM 4, S-Thalidomide, ZINC ION
Authors:Hartmann, M.D, Lupas, A.N, Hernandez Alvarez, B.
Deposit date:2014-10-15
Release date:2014-12-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Thalidomide Mimics Uridine Binding to an Aromatic Cage in Cereblon.
J.Struct.Biol., 188, 2014
2QG1
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BU of 2qg1 by Molmil
Crystal structure of the 11th PDZ domain of MPDZ (MUPP1)
Descriptor: 1,2-ETHANEDIOL, Multiple PDZ domain protein
Authors:Papagrigoriou, E, Salah, E, Phillips, C, Savitsky, P, Boisguerin, P, Oschkinat, H, Gileadi, C, Yang, X, Elkins, J.M, Ugochukwu, E, Bunkoczi, G, Uppenberg, J, Sundstrom, M, Arrowsmith, C.H, Weigelt, J, Edwards, A, von Delft, F, Doyle, D, Structural Genomics Consortium (SGC)
Deposit date:2007-06-28
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of the 11th PDZ domain of MPDZ (MUPP1).
To be Published
4V31
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BU of 4v31 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Deoxyuridine
Descriptor: 2'-DEOXYURIDINE, CEREBLON ISOFORM 4, CITRATE ANION, ...
Authors:Hartmann, M.D, Lupas, A.N, Hernandez Alvarez, B.
Deposit date:2014-10-15
Release date:2014-12-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Thalidomide Mimics Uridine Binding to an Aromatic Cage in Cereblon.
J.Struct.Biol., 188, 2014
8TR9
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BU of 8tr9 by Molmil
Cryo-EM structure of transglutaminase 2 bound to GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Protein-glutamine gamma-glutamyltransferase 2
Authors:Aplin, C, Cerione, R.A.
Deposit date:2023-08-09
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Conformational activation and inhibition of transglutaminase 2 determined by static and time resolved small-angle X-ray scattering and cryoelectron microscopy
To Be Published
4V2Z
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BU of 4v2z by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Pomalidomide
Descriptor: CEREBLON ISOFORM 4, S-Pomalidomide, ZINC ION
Authors:Hartmann, M.D, Lupas, A.N, Hernandez Alvarez, B.
Deposit date:2014-10-15
Release date:2014-12-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Thalidomide Mimics Uridine Binding to an Aromatic Cage in Cereblon.
J.Struct.Biol., 188, 2014
4V2Y
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BU of 4v2y by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Thalidomide
Descriptor: CEREBLON ISOFORM 4, S-Thalidomide, ZINC ION
Authors:Hartmann, M.D, Lupas, A.N, Hernandez Alvarez, B.
Deposit date:2014-10-15
Release date:2014-12-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Thalidomide Mimics Uridine Binding to an Aromatic Cage in Cereblon.
J.Struct.Biol., 188, 2014
8TWL
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BU of 8twl by Molmil
Cryo-EM structure of Aldolase collected by SerialEM on Glacios at 2.7 Angstrom resolution
Descriptor: Fructose-bisphosphate aldolase A
Authors:Jia, L, Ruben, E.A, Olsen, S.K, Wasmuth, E.V.
Deposit date:2023-08-21
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structure of Aldolase collected by SerialEM on Glacios at 2.7 Angstrom resolution
To Be Published
8TWK
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BU of 8twk by Molmil
Cryo-EM structure of Aldolase collected by EPU on Glacios at 2.6 Angstrom resolution
Descriptor: Fructose-bisphosphate aldolase A
Authors:Jia, L, Ruben, E.A, Olsen, S.K, Wasmuth, E.V.
Deposit date:2023-08-21
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Cryo-EM structure of Aldolase collected by EPU on Glacios at 2.6 Angstrom resolution
To Be Published
8TWM
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BU of 8twm by Molmil
Cryo-EM structure of Aldolase collected by Leginon on Glacios at 2.6 Angstrom resolution
Descriptor: Fructose-bisphosphate aldolase A
Authors:Jia, L, Ruben, E.A, Olsen, S.K, Wasmuth, E.V.
Deposit date:2023-08-21
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Cryo-EM structure of Aldolase collected by Leginon on Glacios at 2.6 Angstrom resolution
To Be Published
8U1H
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BU of 8u1h by Molmil
Axle-less Bacillus sp. PS3 F1 ATPase mutant
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP synthase gamma chain, ATP synthase subunit alpha, ...
Authors:Furlong, E.J, Zeng, Y.C, Brown, S.H.J, Sobti, M, Stewart, A.G.
Deposit date:2023-09-01
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The molecular structure of an axle-less F1 ATPase
To Be Published
4WVC
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BU of 4wvc by Molmil
Crystal structure of GH63 mannosylglycerate hydrolase from Thermus thermophilus HB8 in complex with Tris and D-glycerate
Descriptor: (2R)-2,3-DIHYDROXYPROPANOIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
Authors:Miyazaki, T, Ichikawa, M, Nishikawa, A, Tonozuka, T.
Deposit date:2014-11-05
Release date:2015-03-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure and substrate-binding mode of GH63 mannosylglycerate hydrolase from Thermus thermophilus HB8.
J.Struct.Biol., 190, 2015
4WEV
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BU of 4wev by Molmil
Crystal structure of human AKR1B10 complexed with NADP+ and sulindac
Descriptor: Aldo-keto reductase family 1 member B10, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, [(1Z)-5-fluoro-2-methyl-1-{4-[methylsulfinyl]benzylidene}-1H-inden-3-yl]acetic acid
Authors:Cousido-Siah, A, Ruiz, F.X, Mitschler, A, Crespo, I, Porte, S, Pares, X, Farres, J, Podjarny, A.
Deposit date:2014-09-11
Release date:2015-01-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.453 Å)
Cite:Structural analysis of sulindac as an inhibitor of aldose reductase and AKR1B10.
Chem.Biol.Interact., 234, 2015

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PDB entries from 2024-10-09

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