Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 89111 results

5CRH
DownloadVisualize
BU of 5crh by Molmil
Human skeletal calsequestrin, M53T mutant high-calcium complex
Descriptor: CALCIUM ION, Calsequestrin-1
Authors:Lewis, K.M, Ronish, L.A, Kang, C.
Deposit date:2015-07-22
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Characterization of Two Human Skeletal Calsequestrin Mutants Implicated in Malignant Hyperthermia and Vacuolar Aggregate Myopathy.
J.Biol.Chem., 290, 2015
6VBC
DownloadVisualize
BU of 6vbc by Molmil
Crystal structure of transpeptidase domain of PBP2 from Neisseria gonorrhoeae cephalosporin-resistant strain H041
Descriptor: Probable peptidoglycan D,D-transpeptidase PenA
Authors:Singh, A, Davies, C.
Deposit date:2019-12-18
Release date:2020-04-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Mutations in Neisseria gonorrhoeae penicillin-binding protein 2 associated with extended-spectrum cephalosporin resistance create an energetic barrier against acylation via restriction of protein dynamics
J.Biol.Chem., 2020
5X71
DownloadVisualize
BU of 5x71 by Molmil
Crystal structure of Rice Dwarf Virus P5 in space group P212121
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, mRNA capping enzyme P5
Authors:Nakamichi, Y, Higashiura, A, Nakagawa, A.
Deposit date:2017-02-23
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.568 Å)
Cite:Crystal structure of the capping enzyme P5 from Rice Dwarf Virus
To Be Published
8U8V
DownloadVisualize
BU of 8u8v by Molmil
Cryo-EM structure of Substrate ATP Bound in the Insertion Site (IS) of Human Mitochondrial Transcription Elongation Complex
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA-directed RNA polymerase, mitochondrial, ...
Authors:Herbine, K.H, Nayak, A.R, Temiakov, D.
Deposit date:2023-09-18
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Structural basis for substrate binding and selection by human mitochondrial RNA polymerase.
Nat Commun, 15, 2024
6FCO
DownloadVisualize
BU of 6fco by Molmil
Structural and functional characterisation of Frataxin (FXN) like protein from Chaetomium thermophilum
Descriptor: MALONIC ACID, Mitochondrial frataxin-like protein
Authors:Jamshidiha, M, Rasheed, M, Pastore, A, Cota, E.
Deposit date:2017-12-20
Release date:2019-01-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural and functional characterization of a frataxin from a thermophilic organism.
FEBS J., 286, 2019
4YG8
DownloadVisualize
BU of 4yg8 by Molmil
CRYSTAL STRUCTURE OF THE CHS5-CHS6 EXOMER CARGO ADAPTOR COMPLEX
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Chitin biosynthesis protein CHS5, Chitin biosynthesis protein CHS6, ...
Authors:Paczkowski, J.E, Richardson, B.C, Strassner, A.M, Fromme, J.C.
Deposit date:2015-02-26
Release date:2015-03-11
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The exomer cargo adaptor structure reveals a novel GTPase-binding domain.
Embo J., 31, 2012
5X7V
DownloadVisualize
BU of 5x7v by Molmil
Crystal structure of Nucleosome assembly protein S (PfNapS) from Plasmodium falciparum
Descriptor: Nucleosome assembly protein
Authors:Gill, J, Yogavel, M, Sharma, A.
Deposit date:2017-02-27
Release date:2017-03-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Structure, localization and histone binding properties of nuclear-associated nucleosome assembly protein from Plasmodium falciparum.
Malar. J., 9, 2010
7MA3
DownloadVisualize
BU of 7ma3 by Molmil
HIV-1 Protease (I84V) in Complex with UMass2
Descriptor: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(1S,2R)-1-benzyl-2-hydroxy-3-{[(4-methoxyphenyl)sulfonyl][(2S)-2-methylbutyl]amino}propyl]carbamate, Protease, SULFATE ION
Authors:Lockbaum, G.J, Schiffer, C.A.
Deposit date:2021-03-31
Release date:2022-11-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.969 Å)
Cite:HIV-1 Protease (I84V) in Complex with UMass2
To Be Published
5J8X
DownloadVisualize
BU of 5j8x by Molmil
CRYSTAL STRUCTURE OF E. COLI PBP5 WITH 2C
Descriptor: (4~{R})-4-[[4-(aminomethyl)phenyl]carbonylamino]-3,3-bis(oxidanyl)-2-oxa-3-boranuidabicyclo[4.4.0]deca-1(10),6,8-triene-10-carboxylic acid, D-alanyl-D-alanine carboxypeptidase DacA
Authors:Brem, J, Cain, R, McDonough, M.A, Clifton, I.J, Fishwick, C.W.G, Schofield, C.J.
Deposit date:2016-04-08
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Structural basis of metallo-beta-lactamase, serine-beta-lactamase and penicillin-binding protein inhibition by cyclic boronates.
Nat Commun, 7, 2016
6SCT
DownloadVisualize
BU of 6sct by Molmil
Cryo-EM structure of the consensus triskelion hub of the clathrin coat complex
Descriptor: Clathrin heavy chain, Clathrin light chain
Authors:Morris, K.L, Cameron, A.D, Sessions, R, Smith, C.J.
Deposit date:2019-07-25
Release date:2019-10-02
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.69 Å)
Cite:Cryo-EM of multiple cage architectures reveals a universal mode of clathrin self-assembly.
Nat.Struct.Mol.Biol., 26, 2019
5JJ5
DownloadVisualize
BU of 5jj5 by Molmil
Crystal structure of iron uptake ABC transporter substrate-binding protein PiaA from Streptococcus pneumoniae Canada MDR_19A bound to hydroxymate siderophore ferrioxamine E and iron(III)
Descriptor: (8E)-6,17,28-trihydroxy-1,6,12,17,23,28-hexaazacyclotritriacont-8-ene-2,5,13,16,24,27-hexone, ABC transporter substrate-binding protein-iron transport, CHLORIDE ION, ...
Authors:Stogios, P.J, Wawrzak, Z, Kurdritska, M, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-04-22
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of iron uptake ABC transporter substrate-binding protein PiaA from Streptococcus pneumoniae Canada MDR_19A bound to hydroxymate siderophore ferrioxamine E and iron(III)
To Be Published
8U8U
DownloadVisualize
BU of 8u8u by Molmil
Cryo-EM Structure of Cognate Substrate ATP Bound in the Entry Site (ES) of Human Mitochondrial Transcription Elongation Complex
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA-directed RNA polymerase, mitochondrial, ...
Authors:Herbine, K.H, Nayak, A.R, Temiakov, D.
Deposit date:2023-09-18
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis for substrate binding and selection by human mitochondrial RNA polymerase.
Nat Commun, 15, 2024
6F05
DownloadVisualize
BU of 6f05 by Molmil
ARABIDOPSIS THALIANA GSTF9, GSO3 BOUND
Descriptor: CHLORIDE ION, GLUTATHIONE SULFONIC ACID, GLYCEROL, ...
Authors:Tossounian, M.A, Wahni, K, VanMolle, I, Vertommen, D, Rosado, L, Messens, J.
Deposit date:2017-11-17
Release date:2018-08-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Redox-regulated methionine oxidation of Arabidopsis thaliana glutathione transferase Phi9 induces H-site flexibility.
Protein Sci., 28, 2019
5JK0
DownloadVisualize
BU of 5jk0 by Molmil
Crystal structure of XerH site-specific recombinase bound to difH substrate: pre-cleavage complex
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Bebel, A, Barabas, O.
Deposit date:2016-04-25
Release date:2016-12-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural snapshots of Xer recombination reveal activation by synaptic complex remodeling and DNA bending.
Elife, 5, 2016
5H4H
DownloadVisualize
BU of 5h4h by Molmil
Structure of PIN-domain protein (VapC4 toxin) from Pyrococcus horikoshii determined at 2.2 A resolution
Descriptor: CADMIUM ION, Ribonuclease VapC4
Authors:Biswas, A, Hatti, K, Srinivasan, N, Murthy, M.R.N, Sekar, K.
Deposit date:2016-10-31
Release date:2016-11-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structure determination of contaminant proteins using the MarathonMR procedure
J. Struct. Biol., 197, 2017
6XF8
DownloadVisualize
BU of 6xf8 by Molmil
DLP 5 fold
Descriptor: Inner capsid protein lambda-1, Inner capsid protein sigma-2, Outer capsid protein mu-1, ...
Authors:Sutton, G, Sun, D.P, Fu, X.F, Kotecha, A, Hecksel, G.W, Clare, D.K, Zhang, P, Stuart, D, Boyce, M.
Deposit date:2020-06-15
Release date:2020-09-23
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Assembly intermediates of orthoreovirus captured in the cell.
Nat Commun, 11, 2020
6SFI
DownloadVisualize
BU of 6sfi by Molmil
Crystal structure of p38 alpha in complex with compound 75 (MCP33)
Descriptor: Mitogen-activated protein kinase 14, ~{N}-[(2~{S})-1-azanyl-4-cyclohexyl-1-oxidanylidene-butan-2-yl]-2-[[[1-(2-methylphenyl)pyrazol-4-yl]carbonylamino]methyl]-1,3-thiazole-5-carboxamide
Authors:Chaikuad, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2019-08-01
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Fast Iterative Synthetic Approach toward Identification of Novel Highly Selective p38 MAP Kinase Inhibitors.
J.Med.Chem., 62, 2019
6S8X
DownloadVisualize
BU of 6s8x by Molmil
Crystal structure of the Rab-binding domain of FIP2
Descriptor: HEXANE-1,6-DIOL, Rab11 family-interacting protein 2
Authors:Kearney, A.M, Khan, A.R.
Deposit date:2019-07-10
Release date:2020-08-05
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of the Rab-binding domain of Rab11 family-interacting protein 2.
Acta Crystallogr.,Sect.F, 76, 2020
6F53
DownloadVisualize
BU of 6f53 by Molmil
CRYSTAL STRUCTURE OF KETOSTEROID ISOMERASE QUADRUPLE VARIANT V88I/L99V/D103S/V101A
Descriptor: Steroid Delta-isomerase
Authors:Dunstan, M, Currin, A.
Deposit date:2017-11-30
Release date:2018-05-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Engineering the "Missing Link" in Biosynthetic (-)-Menthol Production: Bacterial Isopulegone Isomerase.
ACS Catal, 8, 2018
6EVO
DownloadVisualize
BU of 6evo by Molmil
Crystal structure the peptide-substrate-binding domain of human type II collagen prolyl 4-hydroxylase complexed with Pro-Pro-Gly-Pro-Arg-Gly-Pro-Pro-Gly.
Descriptor: DIMETHYL SULFOXIDE, PRO-PRO-GLY-PRO-ARG-GLY-PRO-PRO-GLY, Prolyl 4-hydroxylase subunit alpha-2, ...
Authors:Murthy, A.V, Sulu, R, Koski, M.K, Wierenga, R.K.
Deposit date:2017-11-02
Release date:2018-09-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural enzymology binding studies of the peptide-substrate-binding domain of human collagen prolyl 4-hydroxylase (type-II): High affinity peptides have a PxGP sequence motif.
Protein Sci., 27, 2018
6B21
DownloadVisualize
BU of 6b21 by Molmil
Crystal structure of AmtB from E. coli bound to TopFluor cardiolipin
Descriptor: Ammonia channel, [(2R,5R,11R,14S,24E)-14-[(acetyloxy)methyl]-8-{[5-(3,5-dimethyl-1H-pyrrol-2-yl-kappaN)-5-(3,5-dimethyl-2H-pyrrol-2-ylidene-kappaN)pentanoyl]oxy}-5,11-dihydroxy-2-{[(9E)-octadec-9-enoyl]oxy}-5,11,16-trioxo-4,6,10,12,15-pentaoxa-5lambda~5~,11lambda~5~-diphosphatritriacont-24-en-1-yl (9E)-octadec-9-enoatato](difluoro)boron
Authors:Boone, C.D, Laganowsky, A.
Deposit date:2017-09-19
Release date:2018-03-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Allostery revealed within lipid binding events to membrane proteins.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1NBS
DownloadVisualize
BU of 1nbs by Molmil
Crystal structure of the specificity domain of Ribonuclease P RNA
Descriptor: LEAD (II) ION, MAGNESIUM ION, RIBONUCLEASE P RNA
Authors:Krasilnikov, A.S, Yang, X, Pan, T, Mondragon, A.
Deposit date:2002-12-03
Release date:2003-02-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Crystal structure of the specificity domain of Ribonuclease P
Nature, 421, 2003
5A7R
DownloadVisualize
BU of 5a7r by Molmil
Human poly(ADP-ribose) glycohydrolase in complex with synthetic dimeric ADP-ribose
Descriptor: BETA-MERCAPTOETHANOL, GLYCEROL, POLY(ADP-RIBOSE) GLYCOHYDROLASE, ...
Authors:Lambrecht, M.J, Brichacek, M, Barkauskaite, E, Ariza, A, Ahel, I, Hergenrother, P.J.
Deposit date:2015-07-09
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Synthesis of Dimeric Adp-Ribose and its Structure with Human Poly(Adp-Ribose) Glycohydrolase.
J.Am.Chem.Soc., 137, 2015
6B2V
DownloadVisualize
BU of 6b2v by Molmil
Pyran synthase domain from module nine of the sorangicin pathway
Descriptor: SorB
Authors:Wagner, D.T, Keatinge-Clay, A.T.
Deposit date:2017-09-20
Release date:2018-04-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural and Functional Studies of a Pyran Synthase Domain from a trans-Acyltransferase Assembly Line.
ACS Chem. Biol., 13, 2018
6PEI
DownloadVisualize
BU of 6pei by Molmil
Structure of sorbitol dehydrogenase from Sinorhizobium meliloti 1021
Descriptor: Sorbitol dehydrogenase (L-iditol 2-dehydrogenase)
Authors:Bailey-Elkin, B.A, Kohlmeier, M.G, Oresnik, I.J, Mark, B.L.
Deposit date:2019-06-20
Release date:2020-06-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Characterization of the sorbitol dehydrogenase SmoS from Sinorhizobium meliloti 1021
Acta Crystallogr.,Sect.D, 77, 2021

224931

數據於2024-09-11公開中

PDB statisticsPDBj update infoContact PDBjnumon