Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 89111 results

5IXL
DownloadVisualize
BU of 5ixl by Molmil
Structure of P. vulgaris HigB toxin Y91A variant
Descriptor: CHLORIDE ION, Endoribonuclease HigB
Authors:Schureck, M.A, Repack, A.A, Miles, S.J, Marquez, J, Dunham, C.M.
Deposit date:2016-03-23
Release date:2016-07-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Mechanism of endonuclease cleavage by the HigB toxin.
Nucleic Acids Res., 44, 2016
8PLL
DownloadVisualize
BU of 8pll by Molmil
Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 22.
Descriptor: 1-[2-methyl-1,3-bis(oxidanyl)propan-2-yl]-3-phenyl-urea, FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin glutathione reductase
Authors:Ribeiro, L, Montoya, B.O, Moreira-Filho, J.T, Bowyer, S, Verma, A, Neves, B.J, Owens, R.J, Andrade, C.H, Silva-Jr, F.P, Furnham, N.
Deposit date:2023-06-27
Release date:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Fragment library screening by X-ray crystallography and binding site analysis on thioredoxin glutathione reductase of Schistosoma mansoni.
Sci Rep, 14, 2024
8PLW
DownloadVisualize
BU of 8plw by Molmil
Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 33.
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin glutathione reductase, methyl 4-(4-fluorophenyl)piperazine-1-carboxylate
Authors:Ribeiro, L, Montoya, B.O, Moreira-Filho, J.T, Bowyer, S, Verma, A, Neves, B.J, Owens, R.J, Andrade, C.H, Silva-Jr, F.P, Furnham, N.
Deposit date:2023-06-27
Release date:2024-01-31
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Fragment library screening by X-ray crystallography and binding site analysis on thioredoxin glutathione reductase of Schistosoma mansoni.
Sci Rep, 14, 2024
8PLV
DownloadVisualize
BU of 8plv by Molmil
Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 32.
Descriptor: 1-(diphenylmethyl)azetidin-3-ol, FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin glutathione reductase
Authors:Ribeiro, L, Montoya, B.O, Moreira-Filho, J.T, Bowyer, S, Verma, A, Neves, B.J, Owens, R.J, Andrade, C.H, Silva-Jr, F.P, Furnham, N.
Deposit date:2023-06-27
Release date:2024-01-31
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Fragment library screening by X-ray crystallography and binding site analysis on thioredoxin glutathione reductase of Schistosoma mansoni.
Sci Rep, 14, 2024
8PLB
DownloadVisualize
BU of 8plb by Molmil
Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 12.
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, N-ethyl-4-[(methylsulfonyl)amino]benzamide, Thioredoxin glutathione reductase
Authors:Ribeiro, L, Montoya, B.O, Moreira-Filho, J.T, Bowyer, S, Verma, A, Neves, B.J, Owens, R.J, Andrade, C.H, Silva-Jr, F.P, Furnham, N.
Deposit date:2023-06-27
Release date:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fragment library screening by X-ray crystallography and binding site analysis on thioredoxin glutathione reductase of Schistosoma mansoni.
Sci Rep, 14, 2024
6UAP
DownloadVisualize
BU of 6uap by Molmil
Crystal structure of tryptophan synthase from M. tuberculosis - open form with BRD6309 bound
Descriptor: (2R,3S,4R)-3-(4'-chloro-2',6'-difluoro[1,1'-biphenyl]-4-yl)-4-(fluoromethyl)azetidine-2-carbonitrile, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Chang, C, Michalska, K, Maltseva, N.I, Jedrzejczak, R, McCarren, P, Nag, P.P, Joachimiak, A, Satchell, K, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-09-11
Release date:2019-10-30
Method:X-RAY DIFFRACTION (2.745 Å)
Cite:Crystal structure of tryptophan synthase from M. tuberculosis - open form with BRD6309 bound
To be Published
8PLC
DownloadVisualize
BU of 8plc by Molmil
Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 13.
Descriptor: (1~{R})-1-(4-ethoxyphenyl)ethanamine, FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin glutathione reductase
Authors:Ribeiro, L, Montoya, B.O, Moreira-Filho, J.T, Bowyer, S, Verma, A, Neves, B.J, Owens, R.J, Andrade, C.H, Silva-Jr, F.P, Furnham, N.
Deposit date:2023-06-27
Release date:2024-01-31
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Fragment library screening by X-ray crystallography and binding site analysis on thioredoxin glutathione reductase of Schistosoma mansoni.
Sci Rep, 14, 2024
8PLO
DownloadVisualize
BU of 8plo by Molmil
Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 25.
Descriptor: 2-(4-methylphenyl)-N-{[(2S)-oxolan-2-yl]methyl}acetamide, FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin glutathione reductase
Authors:Ribeiro, L, Montoya, B.O, Moreira-Filho, J.T, Bowyer, S, Verma, A, Neves, B.J, Owens, R.J, Andrade, C.H, Silva-Jr, F.P, Furnham, N.
Deposit date:2023-06-27
Release date:2024-01-31
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Fragment library screening by X-ray crystallography and binding site analysis on thioredoxin glutathione reductase of Schistosoma mansoni.
Sci Rep, 14, 2024
8PLR
DownloadVisualize
BU of 8plr by Molmil
Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 28.
Descriptor: (2R)-1-{[(5-methylthiophen-2-yl)methyl]amino}propan-2-ol, FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin glutathione reductase
Authors:Ribeiro, L, Montoya, B.O, Moreira-Filho, J.T, Bowyer, S, Verma, A, Neves, B.J, Owens, R.J, Andrade, C.H, Silva-Jr, F.P, Furnham, N.
Deposit date:2023-06-27
Release date:2024-01-31
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Fragment library screening by X-ray crystallography and binding site analysis on thioredoxin glutathione reductase of Schistosoma mansoni.
Sci Rep, 14, 2024
8PLP
DownloadVisualize
BU of 8plp by Molmil
Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 26.
Descriptor: (3R)-1-methylpiperidin-3-yl furan-2-carboxylate, FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin glutathione reductase
Authors:Ribeiro, L, Montoya, B.O, Moreira-Filho, J.T, Bowyer, S, Verma, A, Neves, B.J, Owens, R.J, Andrade, C.H, Silva-Jr, F.P, Furnham, N.
Deposit date:2023-06-27
Release date:2024-01-31
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Fragment library screening by X-ray crystallography and binding site analysis on thioredoxin glutathione reductase of Schistosoma mansoni.
Sci Rep, 14, 2024
7ZQP
DownloadVisualize
BU of 7zqp by Molmil
Tail tip of siphophage T5 : open cone after interaction with bacterial receptor FhuA
Descriptor: Probable baseplate hub protein, Probable tape measure protein
Authors:Linares, R, Arnaud, C.A, Effantin, G, Darnault, C, Epalle, N, Boeri Erba, E, Schoehn, G, Breyton, C.
Deposit date:2022-05-02
Release date:2023-02-08
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis of bacteriophage T5 infection trigger and E. coli cell wall perforation.
Sci Adv, 9, 2023
7WM3
DownloadVisualize
BU of 7wm3 by Molmil
hnRNP A2/B1 RRMs in complex with single-stranded DNA
Descriptor: DNA (5'-D(P*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), Heterogeneous nuclear ribonucleoproteins A2/B1
Authors:Abula, A, Liu, Y, Guo, H, Li, T, Ji, X.
Deposit date:2022-01-14
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structural Insight Into hnRNP A2/B1 Homodimerization and DNA Recognition.
J.Mol.Biol., 435, 2022
8A7X
DownloadVisualize
BU of 8a7x by Molmil
NaK C-DI F92A mutant soaked in Cs+
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CESIUM ION, POTASSIUM ION, ...
Authors:Minniberger, S, Plested, A.J.R.
Deposit date:2022-06-21
Release date:2023-02-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Asymmetry and Ion Selectivity Properties of Bacterial Channel NaK Mutants Derived from Ionotropic Glutamate Receptors.
J.Mol.Biol., 435, 2023
4XK0
DownloadVisualize
BU of 4xk0 by Molmil
Crystal structure of a tetramolecular RNA G-quadruplex in potassium
Descriptor: BARIUM ION, POTASSIUM ION, RNA (5'-(*UP*GP*GP*GP*GP*U)-3')
Authors:Chen, M.C, Murat, P, Abecassis, K.A, Ferre-D'Amare, A.R, Balasubramanian, S.
Deposit date:2015-01-09
Release date:2015-02-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Insights into the mechanism of a G-quadruplex-unwinding DEAH-box helicase.
Nucleic Acids Res., 43, 2015
7JIV
DownloadVisualize
BU of 7jiv by Molmil
The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant, in complex with PLP_Snyder530 inhibitor
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-(acryloylamino)-2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]benzamide, ACETATE ION, ...
Authors:Osipiuk, J, Tesar, C, Endres, M, Lisnyak, V, Maki, S, Taylor, C, Zhang, Y, Zhou, Z, Azizi, S.A, Jones, K, Kathayat, R, Snyder, S.A, Dickinson, B.C, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-07-23
Release date:2020-08-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of papain-like protease from SARS-CoV-2 and its complexes with non-covalent inhibitors.
Nat Commun, 12, 2021
8TC0
DownloadVisualize
BU of 8tc0 by Molmil
Cryo-EM Structure of Spike Glycoprotein from Bat Coronavirus WIV1 in Closed Conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Bostina, M, Hills, F.R, Eruera, A.
Deposit date:2023-06-29
Release date:2024-05-01
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (1.88 Å)
Cite:Variation in structural motifs within SARS-related coronavirus spike proteins.
Plos Pathog., 20, 2024
6XY2
DownloadVisualize
BU of 6xy2 by Molmil
Crystal structure of CTLA-4 complexed with the Fab of HL32 antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cytotoxic T-lymphocyte protein 4, Heavy chain, ...
Authors:Gao, H, Zhou, A.
Deposit date:2020-01-29
Release date:2020-12-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structure of CTLA-4 complexed with a pH-sensitive cancer immunotherapeutic antibody.
Cell Discov, 6, 2020
7LRR
DownloadVisualize
BU of 7lrr by Molmil
Co-bound crystal structure of the engineered cyt cb562 variant, DiCyt2, crystallized in the presence of Cu(II) (M1) and Co(II) (M2)
Descriptor: COBALT (II) ION, HEME C, Soluble cytochrome b562
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2021-02-17
Release date:2022-02-23
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Overcoming universal restrictions on metal selectivity by protein design.
Nature, 603, 2022
5J4K
DownloadVisualize
BU of 5j4k by Molmil
Structure of humanised RadA-mutant humRadA22F in complex with 1-Indane-6-carboxylic acid
Descriptor: 2,3-dihydro-1H-indene-2-carboxylic acid, CALCIUM ION, DNA repair and recombination protein RadA, ...
Authors:Fischer, G, Marsh, M, Moschetti, T, Sharpe, T, Scott, D, Morgan, M, Ng, H, Skidmore, J, Venkitaraman, A, Abell, C, Blundell, T.L, Hyvonen, M.
Deposit date:2016-04-01
Release date:2016-10-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.346 Å)
Cite:Engineering Archeal Surrogate Systems for the Development of Protein-Protein Interaction Inhibitors against Human RAD51.
J.Mol.Biol., 428, 2016
5JEC
DownloadVisualize
BU of 5jec by Molmil
Apo-structure of humanised RadA-mutant humRadA33F
Descriptor: CHLORIDE ION, DNA repair and recombination protein RadA, SULFATE ION
Authors:Fischer, G, Marsh, M, Moschetti, T, Sharpe, T, Scott, D, Morgan, M, Ng, H, Skidmore, J, Venkitaraman, A, Abell, C, Blundell, T.L, Hyvonen, M.
Deposit date:2016-04-18
Release date:2016-10-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Engineering Archeal Surrogate Systems for the Development of Protein-Protein Interaction Inhibitors against Human RAD51.
J.Mol.Biol., 428, 2016
7ZK4
DownloadVisualize
BU of 7zk4 by Molmil
The ABCB1 L335C mutant (mABCB1) in the outward facing state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent translocase ABCB1, CHOLESTEROL HEMISUCCINATE, ...
Authors:Parey, K, Januliene, D, Gewering, T, Moeller, A.
Deposit date:2022-04-12
Release date:2023-04-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Tracing the substrate translocation mechanism in P-glycoprotein.
Elife, 12, 2024
7JJ9
DownloadVisualize
BU of 7jj9 by Molmil
Crystal structure of Zn(II)-bound AdcA from Streptococcus pneumoniae
Descriptor: CHLORIDE ION, ZINC ION, Zinc-binding lipoprotein AdcA
Authors:Luo, Z, More, J.R, Kobe, B, McDevitt, C.A.
Deposit date:2020-07-24
Release date:2020-12-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:A Trap-Door Mechanism for Zinc Acquisition by Streptococcus pneumoniae AdcA.
Mbio, 12, 2021
7LR5
DownloadVisualize
BU of 7lr5 by Molmil
Ni-bound crystal structure of the engineered cyt cb562 variant, DiCyt2, crystallized in the presence of Ni(II) (M1) and Cu(II) (M2)
Descriptor: HEME C, NICKEL (II) ION, Soluble cytochrome b562
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2021-02-15
Release date:2022-02-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Overcoming universal restrictions on metal selectivity by protein design.
Nature, 603, 2022
6HKR
DownloadVisualize
BU of 6hkr by Molmil
Human Cellular Retinoic Acid Binding Protein II (CRABPII) with bound synthetic retinoid DC271.
Descriptor: 1,2-ETHANEDIOL, 4-[2-(4,4-dimethyl-1-propan-2-yl-2,3-dihydroquinolin-6-yl)ethynyl]benzoic acid, Cellular retinoic acid-binding protein 2, ...
Authors:Tomlinson, C, Chisholm, D, Whiting, A, Pohl, E.
Deposit date:2018-09-07
Release date:2018-11-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Novel Fluorescence Competition Assay for Retinoic Acid Binding Proteins.
ACS Med Chem Lett, 9, 2018
7JK8
DownloadVisualize
BU of 7jk8 by Molmil
EmrE S64V mutant bound to tetra(4-fluorophenyl)phosphonium at pH 5.8
Descriptor: Multidrug SMR transporter, tetrakis(4-fluorophenyl)phosphanium
Authors:Shcherbakov, A.A, Hisao, G, Mandala, V.S, Thomas, N.E, Soltani, M, Salter, E.A, Davis Jr, J.H, Henzler-Wildman, K.A, Hong, M.
Deposit date:2020-07-27
Release date:2020-12-09
Last modified:2024-05-01
Method:SOLID-STATE NMR
Cite:Structure and dynamics of the drug-bound bacterial transporter EmrE in lipid bilayers.
Nat Commun, 12, 2021

224931

건을2024-09-11부터공개중

PDB statisticsPDBj update infoContact PDBjnumon