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PDB: 88911 results

7S76
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HBV CAPSID Y132A WITH COMPOUND 10b AT 2.5A RESOLUTION
Descriptor: (1-methyl-1H-1,2,4-triazol-3-yl)methyl {(4S)-1-[(3-chloro-4-fluorophenyl)carbamoyl]-2-methyl-2,4,5,6-tetrahydrocyclopenta[c]pyrrol-4-yl}carbamate, Capsid protein
Authors:Olland, A.M, Suto, R.K.
Deposit date:2021-09-15
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The identification of highly efficacious functionalised tetrahydrocyclopenta[ c ]pyrroles as inhibitors of HBV viral replication through modulation of HBV capsid assembly.
Rsc Med Chem, 13, 2022
1UOZ
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Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with thiocellopentaose at 1.1 angstrom
Descriptor: 4-thio-beta-D-glucopyranose, GLYCEROL, PUTATIVE CELLULASE, ...
Authors:Varrot, A, Leydier, S, Pell, G, Gilbert, H.J, Davies, G.J.
Deposit date:2003-09-26
Release date:2004-11-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Mycobacterium Tuberculosis Strains Possess Functional Cellulases.
J.Biol.Chem., 280, 2005
7SBY
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BU of 7sby by Molmil
Structure of OC43 spike in complex with polyclonal Fab7 (Donor 269)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Human polyclonal Fab model with polyalanine backbone - Heavy chain, ...
Authors:Bangaru, S, Antanasijevic, A, Ward, A.
Deposit date:2021-09-26
Release date:2022-05-04
Last modified:2022-05-18
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural mapping of antibody landscapes to human betacoronavirus spike proteins.
Sci Adv, 8, 2022
3ZKQ
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BACE2 XAPERONE COMPLEX
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BETA-SECRETASE 2, CHLORIDE ION, ...
Authors:Banner, D.W, Kuglstatter, A, Benz, J, Stihle, M, Ruf, A.
Deposit date:2013-01-24
Release date:2013-05-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Mapping the Conformational Space Accessible to Bace2 Using Surface Mutants and Co-Crystals with Fab-Fragments, Fynomers, and Xaperones
Acta Crystallogr.,Sect.D, 69, 2013
7SB4
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Structure of OC43 spike in complex with polyclonal Fab2 (Donor 1412)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Human polyclonal Fab model with polyalanine backbone - Heavy chain, ...
Authors:Bangaru, S, Antanasijevic, A, Ward, A.
Deposit date:2021-09-23
Release date:2022-05-04
Last modified:2022-05-18
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Structural mapping of antibody landscapes to human betacoronavirus spike proteins.
Sci Adv, 8, 2022
3ZLB
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Crystal structure of phosphoglycerate kinase from Streptococcus pneumoniae
Descriptor: GLYCEROL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Bernardo-Garcia, N, Hermoso, J.A.
Deposit date:2013-01-30
Release date:2014-02-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Pneumococcal phosphoglycerate kinase interacts with plasminogen and its tissue activator.
Thromb. Haemost., 111, 2014
7SB3
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BU of 7sb3 by Molmil
Structure of OC43 spike in complex with polyclonal Fab1 (Donor 269)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Human polyclonal Fab model with polyalanine backbone - Heavy chain, ...
Authors:Ward, A, Bangaru, S, Antanasijevic, A.
Deposit date:2021-09-23
Release date:2022-05-04
Last modified:2022-05-18
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural mapping of antibody landscapes to human betacoronavirus spike proteins.
Sci Adv, 8, 2022
7SB5
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BU of 7sb5 by Molmil
Structure of OC43 spike in complex with polyclonal Fab3 (Donor 1412)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Human polyclonal Fab model with polyalanine backbone - Heavy chain, ...
Authors:Bangaru, S, Antanasijevic, A, Ward, A.
Deposit date:2021-09-23
Release date:2022-05-04
Last modified:2022-05-18
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural mapping of antibody landscapes to human betacoronavirus spike proteins.
Sci Adv, 8, 2022
6EFV
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BU of 6efv by Molmil
The NADPH-dependent sulfite reductase flavoprotein adopts an extended conformation that is unique to this diflavin reductase
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Tavolieri, A.M, Askenasy, I, Murray, D.T, Pennington, J.M, Stroupe, M.E.
Deposit date:2018-08-17
Release date:2019-02-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.341 Å)
Cite:NADPH-dependent sulfite reductase flavoprotein adopts an extended conformation unique to this diflavin reductase.
J. Struct. Biol., 205, 2019
7SBV
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BU of 7sbv by Molmil
Structure of OC43 spike in complex with polyclonal Fab4 (Donor 269)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Human polyclonal Fab model with polyalanine backbone - Heavy chain, ...
Authors:Bangaru, S, Antanasijevic, A, Ward, A.
Deposit date:2021-09-26
Release date:2022-05-04
Last modified:2022-05-18
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural mapping of antibody landscapes to human betacoronavirus spike proteins.
Sci Adv, 8, 2022
7SBW
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BU of 7sbw by Molmil
Structure of OC43 spike in complex with polyclonal Fab5 (Donor 1051)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Human polyclonal Fab model with polyalanine backbone - Heavy chain, ...
Authors:Bangaru, S, Antanasijevic, A, Ward, A.
Deposit date:2021-09-26
Release date:2022-05-04
Last modified:2022-05-18
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural mapping of antibody landscapes to human betacoronavirus spike proteins.
Sci Adv, 8, 2022
3ZH0
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BU of 3zh0 by Molmil
Functional and structural role of the N-terminal extension in Methanosarcina acetivorans protoglobin
Descriptor: FORMIC ACID, GLYCEROL, PROTOGLOBIN, ...
Authors:Ciaccio, C, Pesce, A, Tundo, G.R, Tilleman, L, Dewilde, S, Moens, L, Ascenzi, P, Bolognesi, M, Nardini, M, Coletta, M.
Deposit date:2012-12-19
Release date:2013-03-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional and Structural Role of the N-Terminal Extension in Methanosarcina Acetivorans Protoglobin.
Biochim.Biophys.Acta, 1834, 2013
3ZLH
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BU of 3zlh by Molmil
Structure of group A Streptococcal enolase
Descriptor: ENOLASE
Authors:Cork, A.J, Ericsson, D.J, Law, R.H.P, Casey, L.W, Valkov, E, Bertozzi, C, Stamp, A, Aquilina, J.A, Whisstock, J.C, Walker, M.J, Kobe, B.
Deposit date:2013-01-31
Release date:2014-02-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Stability of the Octameric Structure Affects Plasminogen-Binding Capacity of Streptococcal Enolase.
Plos One, 10, 2015
5BQM
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BU of 5bqm by Molmil
Crystal structure of SXN101959, a Clostridium botulinum neurotoxin type D derivative and targeted secretion inhibitor
Descriptor: Botulinum neurotoxin type D, Somatoliberin,Botulinum neurotoxin type D, ZINC ION
Authors:Masuyer, G, Davies, J.R, Moore, K, Chaddock, J.A, Acharya, K.R.
Deposit date:2015-05-29
Release date:2015-08-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural analysis of Clostridium botulinum neurotoxin type D as a platform for the development of targeted secretion inhibitors.
Sci Rep, 5, 2015
3ZN0
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BU of 3zn0 by Molmil
LSD1-CoREST in complex with PRSFAA peptide
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A, PEPTIDE, ...
Authors:Tortorici, M, Borrello, M.T, Tardugno, M, Chiarelli, L.R, Pilotto, S, Ciossani, G, Vellore, N.A, Cowan, J, O'Connell, M, Mai, A, Baron, R, Ganesan, A, Mattevi, A.
Deposit date:2013-02-13
Release date:2013-06-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Protein Recognition by Small Peptide Reversible Inhibitors of the Chromatin-Modifying Lsd1/Corest Lysine Demethylase.
Acs Chem.Biol., 8, 2013
3ZOV
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BU of 3zov by Molmil
CRYSTAL STRUCTURE OF BACE-1 IN COMPLEX WITH CHEMICAL LIGAND
Descriptor: 5-(2,2,2-Trifluoro-ethoxy)-pyridine-2-carboxylic acid [3-((S)-2-amino-1,4-dimethyl-6-oxo-1,4,5,6-tetrahydro-pyrimidin-4-yl)-phenyl]-amide, BETA-SECRETASE 1, DIMETHYL SULFOXIDE, ...
Authors:Banner, D.W, Kuglstatter, A, Benz, J, Stihle, M, Ruf, A.
Deposit date:2013-02-25
Release date:2013-05-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mapping the Conformational Space Accessible to Bace2 Using Surface Mutants and Co-Crystals with Fab-Fragments, Fynomers, and Xaperones
Acta Crystallogr.,Sect.D, 69, 2013
3ZPR
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BU of 3zpr by Molmil
Thermostabilised turkey beta1 adrenergic receptor with 4-methyl-2-(piperazin-1-yl) quinoline bound
Descriptor: 4-METHYL-2-(PIPERAZIN-1-YL) QUINOLINE, BETA-1 ADRENERGIC RECEPTOR, CHOLESTEROL HEMISUCCINATE, ...
Authors:Christopher, J.A, Congreve, M, Dore, A.S, Marshall, F.H, Myszka, D.G, Brown, J, Koglin, M, Tehan, B, Errey, J.C, Tate, C.G, Warne, T.
Deposit date:2013-03-01
Release date:2013-04-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Biophysical Fragment Screening of the Beta1-Adrenergic Receptor: Identification of High Affinity Aryl Piperazine Leads Using Structure-Based Drug Design.
J.Med.Chem., 56, 2013
8C7T
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BU of 8c7t by Molmil
Unliganded transcriptional pleiotropic repressor CodY from Enterococcus faecalis
Descriptor: GTP-sensing transcriptional pleiotropic repressor CodY
Authors:Hainzl, T, Sauer-Eriksson, A.E.
Deposit date:2023-01-17
Release date:2023-06-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural insights into CodY activation and DNA recognition.
Nucleic Acids Res., 51, 2023
7Z2N
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BU of 7z2n by Molmil
Tubulin-18-complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Muehlethaler, T, Prota, A.E, Cavalli, A, Steinmetz, M.O.
Deposit date:2022-02-28
Release date:2022-08-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Novel fragment-derived colchicine-site binders as microtubule-destabilizing agents.
Eur.J.Med.Chem., 241, 2022
8PM1
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BU of 8pm1 by Molmil
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) variant I52V A85Q
Descriptor: FLAVIN MONONUCLEOTIDE, histidine kinase
Authors:Nikolaev, A, Remeeva, A, Gushchin, I.
Deposit date:2023-06-27
Release date:2023-07-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Two distinct mechanisms of flavoprotein spectral tuning revealed by low-temperature and time-dependent spectroscopy.
Protein Sci., 33, 2024
7Z73
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BU of 7z73 by Molmil
Crystal structure of p63 tetramerization domain in complex with darpin 8F1
Descriptor: Darpin 8F1, Isoform 2 of Tumor protein 63
Authors:Chaikuad, A, Strubel, A, Doetsch, V, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2022-03-14
Release date:2022-07-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Designed Ankyrin Repeat Proteins as a tool box for analyzing p63.
Cell Death Differ., 29, 2022
4MCN
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BU of 4mcn by Molmil
Human SOD1 C57S Mutant, Metal-free
Descriptor: SULFATE ION, Superoxide dismutase [Cu-Zn]
Authors:Sea, K, Sohn, S.H, Durazo, A, Sheng, Y, Shaw, B, Cao, X, Taylor, A.B, Whitson, L.J, Holloway, S.P, Hart, P.J, Cabelli, D.E, Gralla, E.B, Valentine, J.S.
Deposit date:2013-08-21
Release date:2014-08-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights into the role of the unusual disulfide bond in copper-zinc superoxide dismutase.
J.Biol.Chem., 290, 2015
1TRO
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BU of 1tro by Molmil
CRYSTAL STRUCTURE OF TRP REPRESSOR OPERATOR COMPLEX AT ATOMIC RESOLUTION
Descriptor: DNA (5'-D(*TP*GP*TP*AP*CP*TP*AP*GP*TP*TP*AP*AP*CP*TP*AP*GP*T P*AP*C)-3'), PROTEIN (TRP REPRESSOR), TRYPTOPHAN
Authors:Otwinowski, Z, Schevitz, R.W, Zhang, R.-G, Lawson, C.L, Joachimiak, A, Marmorstein, R, Luisi, B.F, Sigler, P.B.
Deposit date:1992-08-30
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of trp repressor/operator complex at atomic resolution.
Nature, 335, 1988
5OE1
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Im polyamide in complex with 5'CGATGTACATCG3'- hairpin polyamides studies
Descriptor: 1-methylimidazole-2-carboxylic acid, 3-(3-azaniumylpropanoylamino)propyl-dimethyl-azanium, 4-AMINO-(1-METHYLIMIDAZOLE)-2-CARBOXYLIC ACID, ...
Authors:Padroni, G, Parkinson, J, Burley, G.A.
Deposit date:2017-07-07
Release date:2017-12-06
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Structural basis of DNA duplex distortion induced by thiazole-containing hairpin polyamides.
Nucleic Acids Res., 46, 2018
8C5I
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BU of 8c5i by Molmil
Cyanide dihydratase from Bacillus pumilus C1 variant - Q86R,H305K,H308K,H323K
Descriptor: Cyanide dihydratase
Authors:Mulelu, A.E, Reitz, J, van Rooyen, J, Scheffer, M, Frangakis, A.S, Dlamini, L.S, Woodward, J.D, Benedik, M.J, Sewell, B.T.
Deposit date:2023-01-09
Release date:2023-01-18
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:The Role of Histidine Residues in the Oligomerization of Cyanide Dihydratase from Bacillus pumilus C1
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