Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 88675 results

6ZUQ
DownloadVisualize
BU of 6zuq by Molmil
Crystal structure of the effector Ecp11-1 from Fulvia fulva
Descriptor: Extracellular protein 11-1, GLYCEROL, ZINC ION
Authors:Lazar, N, Mesarich, C, Petit-Houdenot, Y, Talbi, N, Li de la Sierra-Gallay, I, Zelie, E, Blondeau, K, Gracy, J, Ollivier, B, van de Wouw, A, Balesdent, M.H, Idnurm, A, van Tilbeurgh, H, Fudal, I.
Deposit date:2020-07-23
Release date:2021-08-04
Last modified:2022-07-27
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:A new family of structurally conserved fungal effectors displays epistatic interactions with plant resistance proteins.
Plos Pathog., 18, 2022
7P73
DownloadVisualize
BU of 7p73 by Molmil
The PDZ domain of SYNJ2BP complexed with the PDZ-binding motif of HTLV1-TAX1
Descriptor: CALCIUM ION, GLYCEROL, Protein Tax-1, ...
Authors:Gogl, G, Cousido-Siah, A, Trave, G.
Deposit date:2021-07-19
Release date:2022-07-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Quantitative fragmentomics allow affinity mapping of interactomes.
Nat Commun, 13, 2022
6U65
DownloadVisualize
BU of 6u65 by Molmil
Mcl-1 bound to compound 19
Descriptor: 1,2-ETHANEDIOL, 2-[({4-[(4-fluorophenyl)methyl]piperazin-1-yl}sulfonyl)amino]-5-[(2-phenylethyl)sulfanyl]benzoic acid, ACETATE ION, ...
Authors:Stuckey, J.A.
Deposit date:2019-08-29
Release date:2020-03-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Discovery and Characterization of 2,5-Substituted Benzoic Acid Dual Inhibitors of the Anti-apoptotic Mcl-1 and Bfl-1 Proteins.
J.Med.Chem., 63, 2020
6OHW
DownloadVisualize
BU of 6ohw by Molmil
Structural basis for human coronavirus attachment to sialic acid receptors. Apo-HCoV-OC43 S
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike surface glycoprotein, ...
Authors:Tortorici, M.A, Walls, A.C, Lang, Y, Wang, C, Li, Z, Koerhuis, D, Boons, G.J, Bosch, B.J, Rey, F.A, de Groot, R, Veesler, D.
Deposit date:2019-04-07
Release date:2019-06-05
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis for human coronavirus attachment to sialic acid receptors.
Nat.Struct.Mol.Biol., 26, 2019
6M9F
DownloadVisualize
BU of 6m9f by Molmil
PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR Tyrostatin
Descriptor: CALCIUM ION, SEDOLISIN, SULFATE ION, ...
Authors:Wlodawer, A, Li, M, Gustchina, A, Dauter, Z, Uchida, K, Oyama, H, Goldfarb, N.E, Dunn, B.M, Oda, K.
Deposit date:2018-08-23
Release date:2018-10-24
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase
Biochemistry, 40, 2001
6MDQ
DownloadVisualize
BU of 6mdq by Molmil
Crystal structure of equine serum albumin in complex with testosterone
Descriptor: CITRATE ANION, Serum albumin, TESTOSTERONE
Authors:Czub, M.P, Majorek, K.A, Shabalin, I.G, Handing, K.B, Venkataramany, B.S, Cymborowski, M.T, Satchell, K.J, Joachimiak, A, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-09-05
Release date:2018-09-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Testosterone meets albumin - the molecular mechanism of sex hormone transport by serum albumins.
Chem Sci, 10, 2019
7P4A
DownloadVisualize
BU of 7p4a by Molmil
Non-canonical Staphylococcus aureus pathogenicity island repression.
Descriptor: Sri, Stl
Authors:Miguel-Romero, L, Alqasmi, M, Bacarizo, J, Tan, J.A, Cogdell, R.J, Chen, J, Byron, O, Christie, G.E, Marina, A, Penades, J.R.
Deposit date:2021-07-10
Release date:2022-07-27
Last modified:2022-11-16
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Non-canonical Staphylococcus aureus pathogenicity island repression.
Nucleic Acids Res., 50, 2022
6ZUS
DownloadVisualize
BU of 6zus by Molmil
Crystal structure of the effector Ecp11-1 from Fulvia fulva
Descriptor: DI(HYDROXYETHYL)ETHER, Extracellular protein 11-1, GLYCEROL, ...
Authors:Lazar, N, Mesarich, C, Petit-Houdenot, Y, Talbi, N, Li de la Sierra-Gallay, I, Zelie, E, Blondeau, K, Gracy, J, Ollivier, B, van de Wouw, A, Balesdent, M.H, Idnurm, A, van Tilbeurgh, H, Fudal, I.
Deposit date:2020-07-23
Release date:2021-08-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:A new family of structurally conserved fungal effectors displays epistatic interactions with plant resistance proteins.
Plos Pathog., 18, 2022
7SDP
DownloadVisualize
BU of 7sdp by Molmil
Replication Initiator Protein REPE54 and cognate DNA sequence with terminal three prime phosphates.
Descriptor: DNA (5'-D(*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*AP*GP*A)-3'), DNA (5'-D(*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*GP*GP*A)-3'), MAGNESIUM ION, ...
Authors:Ward, A.R, Snow, C.D.
Deposit date:2021-09-29
Release date:2021-10-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Modular Protein-DNA Cocrystals as Precise, Programmable Assembly Scaffolds.
Acs Nano, 17, 2023
8BJS
DownloadVisualize
BU of 8bjs by Molmil
Apo KIF20A[55-510] crystal structure
Descriptor: Kinesin-like protein KIF20A, SULFATE ION, UNK-UNK-UNK-UNK
Authors:Ranaivoson, F.M, Kikuti, C, Crozet, V, Sirkia, M.E, Houdusse, A.
Deposit date:2022-11-06
Release date:2023-10-04
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Nucleotide-free structures of KIF20A illuminate atypical mechanochemistry in this kinesin-6.
Open Biology, 13, 2023
6OBN
DownloadVisualize
BU of 6obn by Molmil
The crystal structure of coexpressed SDS22:PP1 complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, FE (III) ION, ...
Authors:Choy, M.S, Moon, T.M, Bray, J.A, Archuleta, T.L, Shi, W, Peti, W, Page, R.
Deposit date:2019-03-21
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:SDS22 selectively recognizes and traps metal-deficient inactive PP1.
Proc.Natl.Acad.Sci.USA, 116, 2019
6ZZ9
DownloadVisualize
BU of 6zz9 by Molmil
Crystal structure of CbpB from Streptococcus agalactiae
Descriptor: CBS domain-containing protein, PLATINUM (II) ION, SULFATE ION
Authors:Mechaly, A.E, Covaleda-Cortes, G, Kaminski, P.A.
Deposit date:2020-08-04
Release date:2021-08-18
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.644 Å)
Cite:The c-di-AMP-binding protein CbpB modulates the level of ppGpp alarmone in Streptococcus agalactiae.
Febs J., 2023
6WPN
DownloadVisualize
BU of 6wpn by Molmil
Crystal structure of a putative oligosaccharide periplasmic-binding protein from Synechococcus sp. MITs9220
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Substrate-binding protein
Authors:Ford, B.A, Michie, K.A, Paulsen, I.T, Mabbutt, B.C, Shah, B.S.
Deposit date:2020-04-27
Release date:2021-05-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Novel functional insights into a modified sugar-binding protein from Synechococcus MITS9220.
Sci Rep, 12, 2022
6OD2
DownloadVisualize
BU of 6od2 by Molmil
Yeast Spc42 C-terminal Antiparallel Coiled-Coil
Descriptor: Spindle pole body component SPC42
Authors:Drennan, A.C, Krishna, S, Seeger, M.A, Andreas, M.P, Gardner, J.M, Sether, E.K.R, Jaspersen, S.L, Rayment, I.
Deposit date:2019-03-25
Release date:2019-04-24
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.435 Å)
Cite:Structure and function of Spc42 coiled-coils in yeast centrosome assembly and duplication.
Mol.Biol.Cell, 30, 2019
8SH5
DownloadVisualize
BU of 8sh5 by Molmil
Crystal structure of 3'cap-independent translation enhancers (CITE) from Pea enation mosaic virus RNA 2 (PEMV2) with Fab BL3-6K170A
Descriptor: Fab BL3-6K170A heavy chain, Fab BL3-6K170A light chain, RNA (88-MER)
Authors:Lewicka, A, Roman, C, Rice, P.A, Piccirilli, J.A.
Deposit date:2023-04-13
Release date:2023-08-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of a cap-independent translation enhancer RNA.
Nucleic Acids Res., 51, 2023
6ODI
DownloadVisualize
BU of 6odi by Molmil
Structure of CagY from a cryo-EM reconstruction of a T4SS
Descriptor: Type IV secretion system apparatus protein CagY
Authors:Chung, J.M, Sheedlo, M.J, Campbell, A, Sawhney, N, Frick-Cheng, A.E, Lacy, D.B, Cover, T.L, Ohi, M.D.
Deposit date:2019-03-26
Release date:2019-07-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of the Helicobacter pylori Cag type IV secretion system.
Elife, 8, 2019
7A3W
DownloadVisualize
BU of 7a3w by Molmil
Structure of Imine Reductase from Pseudomonas sp.
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, NAD(P)-dependent oxidoreductase, ...
Authors:Cuetos, A, Thorpe, T, Turner, N.J, Grogan, G.
Deposit date:2020-08-18
Release date:2021-08-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Multifunctional biocatalyst for conjugate reduction and reductive amination.
Nature, 604, 2022
7SGC
DownloadVisualize
BU of 7sgc by Molmil
Replication Initiator Protein REPE54 and cognate DNA sequence with terminal five prime phosphates.
Descriptor: DNA (5'-D(P*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*AP*G)-3'), DNA (5'-D(P*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*GP*G)-3'), MAGNESIUM ION, ...
Authors:Ward, A.R, Snow, C.D.
Deposit date:2021-10-05
Release date:2021-10-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Stabilizing DNA-Protein Co-Crystals via Intra-Crystal Chemical Ligation of the DNA
Crystals, 12, 2022
8G9Q
DownloadVisualize
BU of 8g9q by Molmil
Tricomplex of Compound-1, KRAS G12C, and CypA
Descriptor: GTPase KRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Tomlinson, A.C.A, Chen, A, Knox, J.E, Yano, J.K.
Deposit date:2023-02-21
Release date:2023-08-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Chemical remodeling of a cellular chaperone to target the active state of mutant KRAS.
Science, 381, 2023
8BAM
DownloadVisualize
BU of 8bam by Molmil
Eugenol Oxidase (EUGO) from Rhodococcus jostii RHA1, tenfold mutant active on propanol syringol
Descriptor: 2,6-dimethoxy-4-(3-oxidanylpropyl)phenol, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Alvigini, L, Mattevi, A.
Deposit date:2022-10-11
Release date:2023-10-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:One-Pot Biocatalytic Synthesis of rac -Syringaresinol from a Lignin-Derived Phenol.
Acs Catalysis, 13, 2023
8DX2
DownloadVisualize
BU of 8dx2 by Molmil
HIV-1 reverse transcriptase/rilpivirine with bound fragment 4-amino-3-bromopyridine at multiple sites
Descriptor: 1,2-ETHANEDIOL, 3-bromopyridin-4-amine, 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, ...
Authors:Chopra, A, Ruiz, F.X, Bauman, J.D, Arnold, E.
Deposit date:2022-08-02
Release date:2023-05-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Halo Library, a Tool for Rapid Identification of Ligand Binding Sites on Proteins Using Crystallographic Fragment Screening.
J.Med.Chem., 66, 2023
8DX3
DownloadVisualize
BU of 8dx3 by Molmil
HIV-1 reverse transcriptase/rilpivirine with bound fragment 3-bromobenzylamine in the thumb subdomain
Descriptor: 1,2-ETHANEDIOL, 1-(3-bromophenyl)methanamine, 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, ...
Authors:Chopra, A, Ruiz, F.X, Bauman, J.D, Arnold, E.
Deposit date:2022-08-02
Release date:2023-05-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Halo Library, a Tool for Rapid Identification of Ligand Binding Sites on Proteins Using Crystallographic Fragment Screening.
J.Med.Chem., 66, 2023
8BAP
DownloadVisualize
BU of 8bap by Molmil
Eugenol Oxidase (EUGO) from Rhodococcus jostii RHA1, eightfold mutant active on propanol syringol
Descriptor: 4-[(1E)-3-hydroxyprop-1-en-1-yl]-2,6-dimethoxyphenol, CALCIUM ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Alvigini, L, Mattevi, A.
Deposit date:2022-10-11
Release date:2023-10-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:One-Pot Biocatalytic Synthesis of rac -Syringaresinol from a Lignin-Derived Phenol.
Acs Catalysis, 13, 2023
7A0H
DownloadVisualize
BU of 7a0h by Molmil
Structure of homodimeric actin capping protein alpha subunit from Plasmodium berghei
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BROMIDE ION, F-actin-capping protein subunit alpha, ...
Authors:Bendes, A.A, Kursula, P, Kursula, I.
Deposit date:2020-08-09
Release date:2021-08-18
Last modified:2022-02-23
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structure and function of an atypical homodimeric actin capping protein from the malaria parasite.
Cell.Mol.Life Sci., 79, 2022
6U67
DownloadVisualize
BU of 6u67 by Molmil
Mcl-1 bound to compound 24
Descriptor: 2-({[4-(4-tert-butylphenyl)piperazin-1-yl]sulfonyl}amino)-5-{[3-oxo-3-(phenylamino)propyl]sulfanyl}benzoic acid, BIPHENYL, Induced myeloid leukemia cell differentiation protein Mcl-1
Authors:Stuckey, J.A.
Deposit date:2019-08-29
Release date:2020-03-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Discovery and Characterization of 2,5-Substituted Benzoic Acid Dual Inhibitors of the Anti-apoptotic Mcl-1 and Bfl-1 Proteins.
J.Med.Chem., 63, 2020

223166

건을2024-07-31부터공개중

PDB statisticsPDBj update infoContact PDBjnumon