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PDB: 89472 results

3LHD
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BU of 3lhd by Molmil
Crystal structure of P. abyssi tRNA m1A58 methyltransferase in complex with S-adenosyl-L-homocysteine
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SAM-dependent methyltransferase, putative
Authors:Guelorget, A, Golinelli-Pimpaneau, B, Wouters, J, Barbey, C.
Deposit date:2010-01-22
Release date:2010-05-19
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Insights into the hyperthermostability and unusual region-specificity of archaeal Pyrococcus abyssi tRNA m1A57/58 methyltransferase.
Nucleic Acids Res., 38, 2010
4N9P
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BU of 4n9p by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/L25A/V99T at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Caro, J.A, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B.
Deposit date:2013-10-21
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Cavities in proteins
To be Published
3PR3
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BU of 3pr3 by Molmil
Crystal structure of Plasmodium falciparum glucose-6-phosphate isomerase (PF14_0341) in complex with fructose-6-phosphate
Descriptor: 6-O-phosphono-beta-D-fructofuranose, Glucose-6-phosphate isomerase, PHOSPHATE ION
Authors:Gileadi, T, Wernimont, A.K, Hutchinson, A, Weadge, J, Cossar, D, Lew, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Hui, R, Hills, T, Pizarro, J.C, Structural Genomics Consortium (SGC)
Deposit date:2010-11-29
Release date:2011-02-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of Plasmodium falciparum glucose-6-phosphate isomerase (PF14_0341) in complex with fructose-6-phosphate
To be Published
2YPK
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BU of 2ypk by Molmil
Structural features underlying T-cell receptor sensitivity to concealed MHC class I micropolymorphisms
Descriptor: BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-57 ALPHA CHAIN, ...
Authors:Stewart-Jones, G.B, Simpson, P, Van Der Merwe, P.A, Easterbrook, P, Mcmichael, A.J, Rowland-Jones, S.L, Jones, E.Y, Gillespie, G.M.
Deposit date:2012-10-30
Release date:2012-11-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Features Underlying T-Cell Receptor Sensitivity to Concealed Mhc Class I Micropolymorphisms.
Proc.Natl.Acad.Sci.USA, 109, 2012
5RHX
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BU of 5rhx by Molmil
PanDDA analysis group deposition -- Crystal Structure of Zika virus NS3 Helicase in complex with Z1324080698
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 3-fluoro-5-methylbenzene-1-sulfonamide, ...
Authors:Godoy, A.S, Mesquita, N.C.M.R, Oliva, G.
Deposit date:2020-05-25
Release date:2020-06-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:PanDDA analysis group deposition
To Be Published
4HIH
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BU of 4hih by Molmil
Anti-Streptococcus pneumoniae 23F Fab 023.102 with bound rhamnose.
Descriptor: Antibody 023.102, Fab 023.102, alpha-L-rhamnopyranose
Authors:Bryson, S, Risnes, L, Damgupta, S, Thomson, C.A, Schrader, J.W, Pai, E.F.
Deposit date:2012-10-11
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of Preferred Human IgV Genes-Based Protective Antibodies Identify How Conserved Residues Contact Diverse Antigens and Assign Source of Specificity to CDR3 Loop Variation.
J. Immunol., 196, 2016
2EW2
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BU of 2ew2 by Molmil
Crystal Structure of the Putative 2-Dehydropantoate 2-Reductase from Enterococcus faecalis
Descriptor: 2-dehydropantoate 2-reductase, putative, MAGNESIUM ION, ...
Authors:Kim, Y, Zhou, M, Moy, S, Clancy, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-11-01
Release date:2005-12-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Putative 2-Dehydropantoate 2-Reductase from Enterococcus faecalis
To be Published
5X2P
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BU of 5x2p by Molmil
Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with L-glutamate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Nuemket, N, Yasui, N, Atsumi, N, Yamashita, A.
Deposit date:2017-02-02
Release date:2017-05-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.608 Å)
Cite:Structural basis for perception of diverse chemical substances by T1r taste receptors
Nat Commun, 8, 2017
3A8T
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BU of 3a8t by Molmil
Plant adenylate isopentenyltransferase in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Adenylate isopentenyltransferase, PHOSPHATE ION
Authors:Chu, H.-M, Ko, T.-P, Wang, A.H.-J.
Deposit date:2009-10-09
Release date:2009-12-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Crystal structure and substrate specificity of plant adenylate isopentenyltransferase from Humulus lupulus: distinctive binding affinity for purine and pyrimidine nucleotides
Nucleic Acids Res., 38, 2010
4E3Z
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BU of 4e3z by Molmil
Crystal Structure of a oxidoreductase from Rhizobium etli CFN 42
Descriptor: Putative oxidoreductase protein
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-03-11
Release date:2012-03-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of a oxidoreductase from Rhizobium etli CFN 42
To be Published
5XDV
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BU of 5xdv by Molmil
Staphylococcus aureus FtsZ 12-316 G196S complexed with TXA6101
Descriptor: 3-[[5-bromanyl-4-[4-(trifluoromethyl)phenyl]-1,3-oxazol-2-yl]methoxy]-2,6-bis(fluoranyl)benzamide, CALCIUM ION, Cell division protein FtsZ, ...
Authors:Fujita, J, Maeda, Y, Mizohata, E, Inoue, T, Kaul, M, Parhi, A.K, LaVoie, E.J, Pilch, D.S, Matsumura, H.
Deposit date:2017-03-30
Release date:2017-08-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Flexibility of an Inhibitor Overcomes Drug Resistance Mutations in Staphylococcus aureus FtsZ
ACS Chem. Biol., 12, 2017
4E4B
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BU of 4e4b by Molmil
Structure of the fusidic acid resistance protein FusB
Descriptor: Far1, ZINC ION
Authors:Cox, G, Edwards, T.A, O'Neill, A.J.
Deposit date:2012-03-12
Release date:2013-03-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Investigating the FusB:EF-G interface
To be Published
5X9Z
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BU of 5x9z by Molmil
Crystal structure of inositol 1,4,5-trisphosphate receptor large cytosolic domain
Descriptor: Inositol 1,4,5-trisphosphate receptor type 1
Authors:Hamada, K, Miyatake, H, Terauchi, A, Mikoshiba, K.
Deposit date:2017-03-10
Release date:2017-04-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (7.311 Å)
Cite:IP3-mediated gating mechanism of the IP3 receptor revealed by mutagenesis and X-ray crystallography
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1N5H
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BU of 1n5h by Molmil
Solution structure of the cathelin-like domain of protegrins (the R87-P88 and D118-P119 amide bonds are in the cis conformation)
Descriptor: protegrins
Authors:Yang, Y, Sanchez, J.F, Strub, M.P, Brutscher, B, Aumelas, A.
Deposit date:2002-11-06
Release date:2003-06-03
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:NMR Structure of the Cathelin-like domain of the protegrin-3 Precursor
Biochemistry, 42, 2003
1R9I
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BU of 1r9i by Molmil
NMR Solution Structure of PIIIA toxin, NMR, 20 structures
Descriptor: Mu-conotoxin PIIIA
Authors:Nielsen, K.J, Watson, M, Adams, D.J, Hammarstrom, A.K, Gage, P.W, Hill, J.M, Craik, D.J, Thomas, L, Adams, D, Alewood, P.F, Lewis, R.J.
Deposit date:2003-10-30
Release date:2003-11-18
Last modified:2019-12-25
Method:SOLUTION NMR
Cite:Solution structure of mu-conotoxin PIIIA, a preferential inhibitor of persistent tetrodotoxin-sensitive sodium channels
J.Biol.Chem., 277, 2002
3RM0
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BU of 3rm0 by Molmil
Human Thrombin in complex with MI354
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Hirudin variant-2, ...
Authors:Biela, A, Heine, A, Klebe, G.
Deposit date:2011-04-20
Release date:2012-04-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Ligand binding stepwise disrupts water network in thrombin: enthalpic and entropic changes reveal classical hydrophobic effect
J.Med.Chem., 55, 2012
4HTP
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BU of 4htp by Molmil
Crystal structure of the DBD domain of human DNA ligase IV bound to Artemis peptide
Descriptor: DNA ligase 4, Protein artemis
Authors:De Ioannes, P.E, Aggarwal, A.K.
Deposit date:2012-11-01
Release date:2012-12-26
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.2502 Å)
Cite:Structural Basis of DNA Ligase IV-Artemis Interaction in Nonhomologous End-Joining.
Cell Rep, 2, 2012
4NMU
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BU of 4nmu by Molmil
Crystal Structure of Thiol-disulfide Oxidoreductase from Bacillus str. 'Ames Ancestor'
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Kim, Y, Zhou, M, Shatsman, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-11-15
Release date:2013-12-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal Structure of Thiol-disulfide Oxidoreductase from Bacillus str. 'Ames Ancestor'
To be Published
3RK4
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BU of 3rk4 by Molmil
Structure of Rhodococcus rhodochrous haloalkane dehalogenase mutant DhaA31
Descriptor: CHLORIDE ION, Haloalkane dehalogenase
Authors:Lahoda, M, Stsiapanava, A, Mesters, J, Chaloupkova, R, Damborsky, J, Kuta Smatanova, I.
Deposit date:2011-04-17
Release date:2012-04-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Crystallographic analysis of 1,2,3-trichloropropane biodegradation by the haloalkane dehalogenase DhaA31.
Acta Crystallogr.,Sect.D, 70, 2014
1N5P
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BU of 1n5p by Molmil
Solution structure of the cathelin-like domain of protegrins (all amide bonds involving proline residues are in trans conformation)
Descriptor: protegrins
Authors:Yang, Y, Sanchez, J.F, Strub, M.P, Brutscher, B, Aumelas, A.
Deposit date:2002-11-07
Release date:2003-06-03
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:NMR Structure of the Cathelin-like domain of the protegrin-3 Precursor
Biochemistry, 42, 2003
2YIB
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BU of 2yib by Molmil
Structure of the RNA polymerase VP1 from Infectious Pancreatic Necrosis Virus
Descriptor: RNA-DIRECTED RNA POLYMERASE
Authors:Graham, S.C, Sarin, L.P, Bahar, M.W, Myers, R.A, Stuart, D.I, Bamford, D.H, Grimes, J.M.
Deposit date:2011-05-11
Release date:2011-07-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:The N-Terminus of the RNA Polymerase from Infectious Pancreatic Necrosis Virus is the Determinant of Genome Attachment.
Plos Pathog., 7, 2011
4CE6
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BU of 4ce6 by Molmil
Mutagenesis of a Rhodobacteraceae L-haloacid dehalogenase
Descriptor: L-HALOACID DEHALOGENASE
Authors:Novak, H.R, Sayer, C, Isupov, M.N, Littlechild, J.A.
Deposit date:2013-11-08
Release date:2014-11-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Mutagenesis of a Rhodobacteraceae L-Haloacid Dehalogenase
To be Published
1AOA
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BU of 1aoa by Molmil
N-TERMINAL ACTIN-CROSSLINKING DOMAIN FROM HUMAN FIMBRIN
Descriptor: T-FIMBRIN
Authors:Goldsmith, S.C, Pokala, N, Shen, W, Fedorov, A.A, Matsudaira, P, Almo, S.C.
Deposit date:1997-06-30
Release date:1997-12-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The structure of an actin-crosslinking domain from human fimbrin.
Nat.Struct.Biol., 4, 1997
7EY3
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BU of 7ey3 by Molmil
Double cysteine mutations in T1 lipase
Descriptor: CALCIUM ION, CHLORIDE ION, SODIUM ION, ...
Authors:Hamdan, S.H, Leow, T.C, Yahaya, N.M, Ali, M.S.M, Jonet, M.A, Mohamad Aris, S.N.A, Maiangwa, J.
Deposit date:2021-05-29
Release date:2022-12-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Knotting terminal ends of mutant T1 lipase with disulfide bond improved structure rigidity and stability.
Appl.Microbiol.Biotechnol., 107, 2023
5PAG
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BU of 5pag by Molmil
Crystal Structure of Factor VIIa in complex with (2R)-2-hydroxy-N-[[3-[5-hydroxy-4-(1H-pyrrolo[3,2-c]pyridin-2-yl)pyrazol-1-yl]phenyl]methyl]-3-methylbutanamide;hydrobromide
Descriptor: (2R)-2-hydroxy-N-[[3-[5-hydroxy-4-(1H-pyrrolo[3,2-c]pyridin-2-yl)pyrazol-1-yl]phenyl]methyl]-3-methylbutanamide, CALCIUM ION, CHLORIDE ION, ...
Authors:Stihle, M, Mayweg, A, Roever, S, Rudolph, M.G.
Deposit date:2016-11-10
Release date:2017-06-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Crystal Structure of a Factor VIIa complex
To be published

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