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PDB: 89472 results

3QP0
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BU of 3qp0 by Molmil
HIV-1 protease (mutant Q7K L33I L63I) in complex with a novel inhibitor
Descriptor: (4aS,7aS)-1,4-bis[3-(hydroxymethyl)benzyl]hexahydro-1H-pyrrolo[3,4-b]pyrazine-2,3-dione, CHLORIDE ION, Protease
Authors:Lindemann, I, Heine, A, Klebe, G.
Deposit date:2011-02-11
Release date:2012-02-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Novel inhibitors for HIV-1 protease
To be Published
6NPS
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BU of 6nps by Molmil
Crystal structure of GH115 enzyme AxyAgu115A from Amphibacillus xylanus
Descriptor: AxyAgu115A, CHLORIDE ION, GLYCEROL
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Yan, R, Master, E, Savchenko, A.
Deposit date:2019-01-18
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural characterization of the family GH115 alpha-glucuronidase from Amphibacillus xylanus yields insight into its coordinated action with alpha-arabinofuranosidases.
N Biotechnol, 2021
5DWP
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BU of 5dwp by Molmil
Crystal Structure of human transthyretin (TTR) processed with the CrystalDirect automated mounting and cryo-cooling technology
Descriptor: Transthyretin
Authors:Zander, U, Cornaciu, I, Forsyth, T, Yee, A, Marquez, J.A.
Deposit date:2015-09-22
Release date:2016-04-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Automated harvesting and processing of protein crystals through laser photoablation.
Acta Crystallogr D Struct Biol, 72, 2016
5DMU
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BU of 5dmu by Molmil
Structure of the NHEJ polymerase from Methanocella paludicola
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, NHEJ Polymerase, ...
Authors:Brissett, N.C, Bartlett, E.J, Doherty, A.J.
Deposit date:2015-09-09
Release date:2015-10-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:Molecular basis for DNA strand displacement by NHEJ repair polymerases.
Nucleic Acids Res., 44, 2016
3C8K
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BU of 3c8k by Molmil
The crystal structure of Ly49C bound to H-2Kb
Descriptor: H-2 class I histocompatibility antigen, K-B alpha chain, Natural killer cell receptor Ly-49C, ...
Authors:Deng, L, Mariuzza, R.A.
Deposit date:2008-02-12
Release date:2008-04-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Molecular architecture of the major histocompatibility complex class I-binding site of Ly49 natural killer cell receptors.
J.Biol.Chem., 283, 2008
3C8M
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BU of 3c8m by Molmil
Crystal structure of homoserine dehydrogenase from Thermoplasma volcanium
Descriptor: Homoserine dehydrogenase, SULFATE ION
Authors:Osipiuk, J, Hendricks, R, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-02-12
Release date:2008-02-19
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray crystal structure of homoserine dehydrogenase from Thermoplasma volcanium.
To be Published
7M92
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BU of 7m92 by Molmil
Crystal structure of unknown function protein protein B9J08_000055 Candida auris
Descriptor: Homoserine dehydrogenase
Authors:Chang, C, Evdokimova, E, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-03-30
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of unknown function protein protein B9J08_000055 Candida auris
To Be Published
6DZ1
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BU of 6dz1 by Molmil
Studies of Ion Transport in K+ Channels
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein
Authors:Langan, P.S, Vandavasi, V.G, Weiss, K.L, Wagner, A, Duman, R, El Omari, K, Afonine, P.V, Coates, L.
Deposit date:2018-07-02
Release date:2018-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Anomalous X-ray diffraction studies of ion transport in K+channels.
Nat Commun, 9, 2018
6NAX
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BU of 6nax by Molmil
Olfactomedin domain of mouse myocilin
Descriptor: CALCIUM ION, GLYCEROL, Myocilin, ...
Authors:Patterson-Orazem, A.C, Hill, S.E, Lieberman, R.L.
Deposit date:2018-12-06
Release date:2019-03-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Differential Misfolding Properties of Glaucoma-Associated Olfactomedin Domains from Humans and Mice.
Biochemistry, 58, 2019
5DS0
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BU of 5ds0 by Molmil
Crystal structure of TET aminopeptidase from marine sediment archaeon Thaumarchaeota archaeon SCGC AB-539-E09
Descriptor: COBALT (II) ION, GLYCEROL, Peptidase M42
Authors:Michalska, K, Chhor, G, Mootz, J, Endres, M, Jedrzejczak, R, Babnigg, G, Steen, A, Lloyd, K, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-09-16
Release date:2015-10-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of TET aminopeptidase from marine sediment archaeon Thaumarchaeota archaeon SCGC AB-539-E09
To Be Published
6NK3
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BU of 6nk3 by Molmil
Crystal structure of murine Mxra8 ectodomain
Descriptor: Matrix remodeling-associated protein 8
Authors:Fremont, D.H, Kim, A.S, Nelson, C.A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-01-04
Release date:2019-05-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cryo-EM Structure of Chikungunya Virus in Complex with the Mxra8 Receptor.
Cell, 177, 2019
6NB9
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BU of 6nb9 by Molmil
Amyloid-Beta (20-34) with L-isoaspartate 23
Descriptor: Amyloid-beta A4 protein
Authors:Sawaya, M.R, Warmack, R.A, Boyer, D.R, Zee, C.T, Richards, L.S, Cascio, D, Gonen, T, Clarke, S.G, Eisenberg, D.S.
Deposit date:2018-12-06
Release date:2019-08-07
Last modified:2022-09-07
Method:ELECTRON CRYSTALLOGRAPHY (1.05 Å)
Cite:Structure of amyloid-beta (20-34) with Alzheimer's-associated isomerization at Asp23 reveals a distinct protofilament interface.
Nat Commun, 10, 2019
5AFG
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BU of 5afg by Molmil
Structure of the Stapled Peptide Bound to Mdm2
Descriptor: 1,8-DIETHYL-1,8-DIHYDRODIBENZO[3,4:7,8][1,2,3]TRIAZOLO[4',5':5,6]CYCLOOCTA[1,2-D][1,2,3]TRIAZOLE, E3 UBIQUITIN-PROTEIN LIGASE MDM2, STAPLED PEPTIDE
Authors:Lau, Y.H, Wu, Y, Rossmann, M, de Andrade, P, Tan, Y.S, McKenzie, G.J, Venkitaraman, A.R, Hyvonen, M, Spring, D.R.
Deposit date:2015-01-22
Release date:2016-01-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Double Strain-Promoted Macrocyclization for the Rapid Selection of Cell-Active Stapled Peptides.
Angew.Chem.Int.Ed.Engl., 54, 2015
7BJY
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BU of 7bjy by Molmil
Crystal structure of the first bromodomain (BD1) of human BRDT bound to Ro3280
Descriptor: 1,2-ETHANEDIOL, 4-[(9-cyclopentyl-7,7-difluoro-5-methyl-6-oxo-6,7,8,9-tetrahydro-5H-pyrimido[4,5-b][1,4]diazepin-2-yl)amino]-3-methoxy-N-(1-methylpiperidin-4-yl)benzamide, Isoform 2 of Bromodomain testis-specific protein
Authors:Chan, A, Karim, M.R, Schonbrunn, E.
Deposit date:2021-01-14
Release date:2021-08-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Differential BET Bromodomain Inhibition by Dihydropteridinone and Pyrimidodiazepinone Kinase Inhibitors.
J.Med.Chem., 64, 2021
6DZD
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BU of 6dzd by Molmil
Crystal structure of Bacillus licheniformis hypothetical protein YfiH
Descriptor: CHLORIDE ION, POTASSIUM ION, SODIUM ION, ...
Authors:Almeida, L.R, Grejo, M.P, Mulinari, E.J, Santos, J.C, Camargo, S, Bernardes, A, Muniz, J.R.C.
Deposit date:2018-07-03
Release date:2019-09-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Crystal structure of Bacillus licheniformis hypothetical protein YfiH
To Be Published
5A14
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BU of 5a14 by Molmil
Human CDK2 with type II inhibitor
Descriptor: 1-[4-(2-azanylpyrimidin-4-yl)oxyphenyl]-3-[4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl]urea, CYCLIN-DEPENDENT KINASE 2
Authors:Alexander, L.T, Elkins, J.M, Kopec, J, Fedorov, O, Savitsky, P.A, Moebitz, H, Cowan-Jacob, S.W, Szklarz, M, Pike, A.C.W, Carpenter, E.P, Krojer, T, Bountra, C, Edwards, A.M, Knapp, S.
Deposit date:2015-04-27
Release date:2015-07-22
Last modified:2019-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Type II Inhibitors Targeting Cdk2.
Acs Chem.Biol., 10, 2015
5A1V
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BU of 5a1v by Molmil
The structure of the COPI coat linkage I
Descriptor: ADP-RIBOSYLATION FACTOR 1, COATOMER SUBUNIT ALPHA, COATOMER SUBUNIT BETA, ...
Authors:Dodonova, S.O, Diestelkoetter-Bachert, P, von Appen, A, Hagen, W.J.H, Beck, R, Beck, M, Wieland, F, Briggs, J.A.G.
Deposit date:2015-05-06
Release date:2015-07-08
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (21 Å)
Cite:Vesicular Transport. A Structure of the Copi Coat and the Role of Coat Proteins in Membrane Vesicle Assembly.
Science, 349, 2015
5BY4
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BU of 5by4 by Molmil
Structure and function of the Escherichia coli Tol-Pal stator protein TolR
Descriptor: Protein TolR, SODIUM ION
Authors:Wojdyla, J.A, Kaminska, R, Kleanthous, C.
Deposit date:2015-06-10
Release date:2015-09-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:Structure and Function of the Escherichia coli Tol-Pal Stator Protein TolR.
J.Biol.Chem., 290, 2015
3CAX
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BU of 3cax by Molmil
Crystal structure of uncharacterized protein PF0695
Descriptor: Uncharacterized protein PF0695
Authors:Ramagopal, U.A, Hu, S, Toro, R, Gilmore, M, Bain, K, Meyer, A.J, Rodgers, L, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-02-20
Release date:2008-03-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Crystal structure of uncharacterized protein PF0695.
To be Published
7Y8U
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BU of 7y8u by Molmil
Crystal structure of AlbEF homolog from Quasibacillus thermotolerans
Descriptor: 1,2-ETHANEDIOL, AlbE homolog, AlbF homolog, ...
Authors:Ishida, K, Nakamura, A, Kojima, S.
Deposit date:2022-06-24
Release date:2022-10-12
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the AlbEF complex involved in subtilosin A biosynthesis.
Structure, 30, 2022
7Y8V
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BU of 7y8v by Molmil
Crystal structure of AlbEF homolog mutant (AlbF-H54A/H58A) from Quasibacillus thermotolerans
Descriptor: 1,2-ETHANEDIOL, AlbE homolog, AlbF homolog H54A/H58A mutant, ...
Authors:Ishida, K, Nakamura, A, Kojima, S.
Deposit date:2022-06-24
Release date:2022-10-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the AlbEF complex involved in subtilosin A biosynthesis.
Structure, 30, 2022
7BOC
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BU of 7boc by Molmil
Crystal structure of the PRMT5 TIM barrel domain in complex with RioK1 peptide
Descriptor: Protein arginine N-methyltransferase 5, peptide
Authors:Krzyzanowski, A, t Hart, P, Waldmann, H, Gasper, R.
Deposit date:2021-01-25
Release date:2021-09-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Biochemical Investigation of the Interaction of pICln, RioK1 and COPR5 with the PRMT5-MEP50 Complex.
Chembiochem, 22, 2021
5ADV
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BU of 5adv by Molmil
The Periplasmic Binding Protein CeuE of Campylobacter jejuni preferentially binds the iron(III) complex of the Linear Dimer Component of Enterobactin
Descriptor: 2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID, 2S-2-[(2,3-DIHYDROXYPHENYL)CARBONYLAMINO]-3-[(2S)-2-[(2,3-DIHYDROXYPHENYL)CARBONYLAMINO]-3-HYDROXY-PROPANOYL]OXY-PROPANOIC ACID, DIMETHYL SULFOXIDE, ...
Authors:Raines, D.J, Moroz, O.V, Turkenburg, J.P, Wilson, K.S, Duhme-Klair, A.K.
Deposit date:2015-08-24
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Bacteria in an Intense Competition for Iron: Key Component of the Campylobacter Jejuni Iron Uptake System Scavenges Enterobactin Hydrolysis Product.
Proc.Natl.Acad.Sci.USA, 113, 2016
5VFF
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BU of 5vff by Molmil
Synaptotagmin 1 C2B domain, lead-bound (low occupancy)
Descriptor: LEAD (II) ION, Synaptotagmin-1
Authors:Taylor, A.B, Hart, P.J, Igumenova, T.I.
Deposit date:2017-04-07
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.413 Å)
Cite:High affinity interactions of Pb2+with synaptotagmin I.
Metallomics, 10, 2018
2GHO
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BU of 2gho by Molmil
Recombinant Thermus aquaticus RNA polymerase for Structural Studies
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta',DNA-directed RNA polymerase subunit beta'
Authors:Lamour, V, Darst, S.A.
Deposit date:2006-03-27
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (5 Å)
Cite:Recombinant Thermus aquaticus RNA Polymerase for Structural Studies.
J.Mol.Biol., 359, 2006

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