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PDB: 89346 件

7JSW
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ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2020-08-16
公開日2020-11-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献ArfB can displace mRNA to rescue stalled ribosomes.
Nat Commun, 11, 2020
6GN4
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tc-DNA/tc-DNA duplex
分子名称: Tc-DNA (5'-D(*(TCJ)P*(TTK)P*(TCJ)P*(TCS)P*(TCS)P*(TCJ)P*(TTK)P*(TTK)P*(TCY)P*(TCJ))-3'), Tc-DNA (5'-D(*(TCS)P*(TTK)P*(TCY)P*(TCY)P*(TCS)P*(TCJ)P*(TCJ)P*(TCS)P*(TCY)P*(TCS))-3')
著者Istrate, A, Johannsen, S, Istrate, A, Sigel, R.K.O, Leumann, C.
登録日2018-05-29
公開日2018-06-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR solution structure of tricyclo-DNA containing duplexes: insight into enhanced thermal stability and nuclease resistance.
Nucleic Acids Res., 47, 2019
8D0E
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Human SARM1 TIR domain bound to NB-7
分子名称: 3-(4-chlorophenyl)-N-[4-methyl-3-(pyridin-4-yl)-1H-pyrazol-5-yl]propanamide, NAD(+) hydrolase SARM1
著者Bratkowski, M.A, Mathur, P.
登録日2022-05-26
公開日2022-09-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Uncompetitive, adduct-forming SARM1 inhibitors are neuroprotective in preclinical models of nerve injury and disease.
Neuron, 110, 2022
8D0J
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Apo Human SARM1 TIR domain
分子名称: NAD(+) hydrolase SARM1
著者Bratkowski, M.A, Mathur, P.
登録日2022-05-26
公開日2022-09-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Uncompetitive, adduct-forming SARM1 inhibitors are neuroprotective in preclinical models of nerve injury and disease.
Neuron, 110, 2022
4TZD
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Crystal structure of Canavalia maritima lectin (ConM) complexed with interleukin - 1 beta primer
分子名称: Concanavalin-A, DNA (5'-D(P*CP*G)-3'), DNA (5'-D(P*TP*C)-3')
著者Vieira, D.B.H.A, Delatorre, P, Rocha, B.A.M, Teixeira, C.S, Silva-Filho, J.C, Lima, E.M, Nobrega, R.B, Cavada, B.S.
登録日2014-07-10
公開日2015-07-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of Canavalia maritima lectin (ConM) complexed with interleukin 1 - beta primer
To Be Published
6GNV
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Crystal Structure of Leishmania major N-Myristoyltransferase (NMT) With Bound Myristoyl-CoA and a isopropyl methyl indole aryl sulphonamide ligand
分子名称: GLYCEROL, Glycylpeptide N-tetradecanoyltransferase, TETRADECANOYL-COA, ...
著者Robinson, D.A, Harrison, J.R, Brand, S, Smith, V.C, Thompson, S, Smith, A, Davies, K, Mok, N.Y, Torrie, L.S, Collie, I, Hallyburton, I, Norval, S, Simeons, F.R.C, Stojanovski, L, Frearson, J.A, Brenk, R, Wyatt, P.G, Gilbert, I.H, Read, K.D.
登録日2018-05-31
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Molecular Hybridization Approach for the Design of Potent, Highly Selective, and Brain-Penetrant N-Myristoyltransferase Inhibitors.
J. Med. Chem., 61, 2018
8OWW
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B5-5 nanobody bound to SARS-CoV-2 spike RBD (Wuhan)
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, B5-5 nanobody, ...
著者Cornish, K.A.S, Naismith, J.H, Owens, R.J.
登録日2023-04-28
公開日2024-05-08
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.969 Å)
主引用文献Structural and functional characterization of nanobodies that neutralize Omicron variants of SARS-CoV-2.
Open Biology, 14, 2024
6T2O
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Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Glycosyl hydrolase family 16
著者Crouch, L.I, Liberato, M.V, Ubranowicz, P.A, Basle, A, Lamb, C.A, Cooke, K, Doona, M, Needham, S, Brady, R.R, Berrington, J.E, Madubic, K, Chater, P, Zhang, F, Linhardt, R.J, Spence, D.I.R, Bolam, D.N.
登録日2019-10-09
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown.
Nat Commun, 11, 2020
4Y50
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Endothiapepsin in complex with fragment 81
分子名称: 1,2-ETHANEDIOL, 3-(dimethylamino)benzohydrazide, ACETATE ION, ...
著者Schiebel, J, Heine, A, Klebe, G.
登録日2015-02-11
公開日2016-03-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Crystallographic Fragment Screening of an Entire Library
To Be Published
5DDO
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BU of 5ddo by Molmil
Structural and Dynamic Basis for Low Affinity-High Selectivity Binding of L-glutamine by the Gln-riboswitch
分子名称: L-glutamine riboswitch (58-MER), U1 small nuclear ribonucleoprotein A
著者Ren, A, Patel, D.
登録日2015-08-25
公開日2015-12-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch.
Cell Rep, 13, 2015
7JXE
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BU of 7jxe by Molmil
Mapping neutralizing and immunodominant sites on the SARS-CoV-2 spike receptor-binding domain by structure-guided high-resolution serology
分子名称: S2X35 antigen-binding (Fab) fragment
著者Tortorici, M.A, Park, Y.J, Walls, A.C, Czudnochowski, N, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G, Veesler, D.
登録日2020-08-27
公開日2020-10-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.043 Å)
主引用文献Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell, 183, 2020
5N4D
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Prolyl oligopeptidase B from Galerina marginata bound to 25mer macrocyclization substrate - D661A mutant
分子名称: Alpha-amanitin proprotein, GLYCEROL, Prolyl oligopeptidase
著者Czekster, C.M, McMahon, S.A, Ludewig, H, Naismith, J.H.
登録日2017-02-10
公開日2017-11-01
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Characterization of a dual function macrocyclase enables design and use of efficient macrocyclization substrates.
Nat Commun, 8, 2017
6CHW
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Estrogen Receptor Alpha Y537S covalently bound to antagonist H3B-5942.
分子名称: 1,2-ETHANEDIOL, 4-[(2-{4-[(1E)-1-(1H-indazol-5-yl)-2-phenylbut-1-en-1-yl]phenoxy}ethyl)amino]-N,N-dimethylbutanamide, DIMETHYL SULFOXIDE, ...
著者Larsen, N.A.
登録日2018-02-23
公開日2018-03-21
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Discovery of Selective Estrogen Receptor Covalent Antagonists for the Treatment of ER alphaWTand ER alphaMUTBreast Cancer.
Cancer Discov, 8, 2018
3NIR
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BU of 3nir by Molmil
Crystal structure of small protein crambin at 0.48 A resolution
分子名称: Crambin, ETHANOL
著者Schmidt, A, Teeter, M, Weckert, E, Lamzin, V.S.
登録日2010-06-16
公開日2011-05-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (0.48 Å)
主引用文献Crystal structure of small protein crambin at 0.48 A resolution
Acta Crystallogr.,Sect.F, 67, 2011
8A8C
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BU of 8a8c by Molmil
T5 phage receptor-binding protein pb5 bound to ferrichrome transporter FhuA
分子名称: Ferrichrome outer membrane transporter/phage receptor, Receptor-binding protein pb5, [(2R,3S,4R,5R,6R)-2-[[(2R,4R,5R,6R)-6-[(1R)-1,2-bis(oxidanyl)ethyl]-4-[(2R,4R,5R,6R)-6-[(1R)-1,2-bis(oxidanyl)ethyl]-2-carboxy-4,5-bis(oxidanyl)oxan-2-yl]oxy-2-carboxy-5-oxidanyl-oxan-2-yl]oxymethyl]-5-[[(3R)-3-dodecanoyloxytetradecanoyl]amino]-4-(3-nonanoyloxypropanoyloxy)-6-[[(2R,3S,4R,5R,6R)-3-oxidanyl-4-[(3S)-3-oxidanyltetradecanoyl]oxy-5-[[(3R)-3-oxidanyltridecanoyl]amino]-6-phosphonatooxy-oxan-2-yl]methoxy]oxan-3-yl] phosphate
著者Silale, A, van den Berg, B.
登録日2022-06-22
公開日2022-10-05
最終更新日2022-11-16
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for host recognition and superinfection exclusion by bacteriophage T5.
Proc.Natl.Acad.Sci.USA, 119, 2022
6GQI
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BU of 6gqi by Molmil
Thermocrispum municipale cyclohexanone monooxygenase bound to hexanoic acid
分子名称: ACETATE ION, Cyclohexanone Monooxygenase from Thermocrispum municipale, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Mattevi, A, Gomez Castellanos, J.R.
登録日2018-06-07
公開日2018-12-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Side-Chain Pruning Has Limited Impact on Substrate Preference in a Promiscuous Enzyme.
ACS Catal, 8, 2018
6O21
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Crystal Structure of Human KLK4 in Complex With Cleaved SFTI-FCQR(Asn14)[1,14] Inhibitor
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Kallikrein 4 (Prostase, enamel matrix, ...
著者Ilyichova, O.V, Buckle, A.M.
登録日2019-02-22
公開日2019-03-13
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献KLK4 Inhibition by Cyclic and Acyclic Peptides: Structural and Dynamical Insights into Standard-Mechanism Protease Inhibitors.
Biochemistry, 58, 2019
8A3J
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X-ray crystal structure of a de novo designed antiparallel coiled-coil heterotetramer with 3 heptad repeats, apCC-Tet*3-A2B2
分子名称: apCC-Tet*3-A, apCC-Tet*3-B
著者Naudin, E.A, Mylemans, B, Albanese, K.I, Woolfson, D.N.
登録日2022-06-08
公開日2022-10-05
最終更新日2022-11-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献From peptides to proteins: coiled-coil tetramers to single-chain 4-helix bundles.
Chem Sci, 13, 2022
5N7I
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Crystal structure of the coiled-coil domain of human tricellulin
分子名称: MARVEL domain-containing protein 2
著者Schuetz, A, Heinemann, U.
登録日2017-02-20
公開日2017-07-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Crystal structure of the tricellulin C-terminal coiled-coil domain reveals a unique mode of dimerization.
Ann. N. Y. Acad. Sci., 1405, 2017
5JLV
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Receptor binding domain of Botulinum neurotoxin A in complex with human glycosylated SV2C
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Yao, G, Zhang, S, Mahrhold, S, Lam, K, Stern, D, Bagramyan, K, Perry, K, Kalkum, M, Rummel, A, Dong, M, Jin, R.
登録日2016-04-27
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献N-linked glycosylation of SV2 is required for binding and uptake of botulinum neurotoxin A.
Nat.Struct.Mol.Biol., 23, 2016
4Y9S
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structure of an H300N mutant of potato epoxide hydrolase, StEH1
分子名称: Epoxide hydrolase
著者Naworyta, A, Mowbray, S.L, Widersten, M.
登録日2015-02-17
公開日2015-09-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Expanding the Catalytic Triad in Epoxide Hydrolases and Related Enzymes.
ACS Catal, 5, 2015
3NL6
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The Crystal Structure of Candida glabrata THI6, a Bifunctional Enzyme involved in Thiamin Biosyhthesis of Eukaryotes
分子名称: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, THIAMIN PHOSPHATE, ...
著者Paul, D, Chatterjee, A, Begley, T.P, Ealick, S.E.
登録日2010-06-21
公開日2010-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.612 Å)
主引用文献Domain Organization in Candida glabrata THI6, a Bifunctional Enzyme Required for Thiamin Biosynthesis in Eukaryotes .
Biochemistry, 49, 2010
8PQN
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NQO1 bound to RBS-10
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NAD(P)H dehydrogenase [quinone] 1, ~{N}-[4-[(3-methylphenyl)carbonylamino]phenyl]-5-nitro-furan-2-carboxamide
著者Pous, J, Jose-Duran, F, Mayor-Ruiz, C, Riera, A.
登録日2023-07-11
公開日2024-01-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Discovery and Mechanistic Elucidation of NQO1-Bioactivatable Small Molecules That Overcome Resistance to Degraders.
Angew.Chem.Int.Ed.Engl., 63, 2024
7NUI
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Crystal structure of HLA-B*08:01 in complex with ELRSRYWAI viral peptide
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, ...
著者Mavridis, G, Giastas, P, Mpakali, A.
登録日2021-03-12
公開日2021-04-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of HLA-B*08:01 in complex with ELRSRYWAI viral peptide
To Be Published
6TL3
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Crystal structure of an Estrogen Receptor alpha 8-mer phosphopeptide in complex with 14-3-3sigma stabilized by a Pyrrolidone1 derivative
分子名称: 14-3-3 protein sigma, 5-[(2~{S},3~{R})-3-[(~{R})-azanyl(phenyl)methyl]-2-(4-nitrophenyl)-4,5-bis(oxidanylidene)pyrrolidin-1-yl]-2-oxidanyl-benzoic acid, Estrogen receptor
著者Andrei, S.A, Bosica, F, Ottmann, C, O'Mahony, G.
登録日2019-11-30
公開日2020-04-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.455 Å)
主引用文献Design of Drug-Like Protein-Protein Interaction Stabilizers Guided By Chelation-Controlled Bioactive Conformation Stabilization.
Chemistry, 26, 2020

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件を2024-10-09に公開中

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