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PDB: 88675 件

5JRO
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The crystal structure of azoreductase from Yersinia pestis CO92 in its Apo form
分子名称: FMN-dependent NADH-azoreductase, GLYCEROL
著者Tan, K, Gu, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-05-06
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献The crystal structure of azoreductase from Yersinia pestis CO92 in its Apo form
To Be Published
6PH1
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BU of 6ph1 by Molmil
T4 lysozyme pseudo-wild type soaked in TEMPOL
分子名称: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, Endolysin, ...
著者Cuneo, M.J, Myles, D.A, Li, L.
登録日2019-06-25
公開日2020-07-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.632 Å)
主引用文献Making hydrogens stand out: Enhanced neutron diffraction from biological crystals using dynamic nuclear polarization
To be published
7L5D
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The crystal structure of SARS-CoV-2 Main Protease in complex with demethylated analog of masitinib
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Tan, K, Maltseva, N.I, Jedrzejczak, R.P, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-12-21
公開日2020-12-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Masitinib is a broad coronavirus 3CL inhibitor that blocks replication of SARS-CoV-2.
Science, 373, 2021
8SLA
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Cryo-EM structure of the rat TRPM5 channel in trace calcium, trace-2
分子名称: Transient receptor potential cation channel subfamily M member 5
著者Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
登録日2023-04-21
公開日2024-07-03
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024
6RRO
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Solution NMR structure of the peptide 536_2 from medicinal leech Hirudo medicinalis in dodecylphosphocholine micelles
分子名称: peptide 536_2
著者Nadezhdin, K.D, Grafskaia, E.N, Arseniev, A.S, Lazarev, V.N.
登録日2019-05-20
公開日2019-07-24
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Medicinal leech antimicrobial peptides lacking toxicity represent a promising alternative strategy to combat antibiotic-resistant pathogens.
Eur.J.Med.Chem., 180, 2019
6RRL
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BU of 6rrl by Molmil
Solution NMR structure of the peptide 3967 from medicinal leech Hirudo medicinalis in dodecylphosphocholine micelles
分子名称: peptide 3967
著者Nadezhdin, K.D, Grafskaia, E.N, Arseniev, A.S, Lazarev, V.N.
登録日2019-05-20
公開日2019-07-24
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Medicinal leech antimicrobial peptides lacking toxicity represent a promising alternative strategy to combat antibiotic-resistant pathogens.
Eur.J.Med.Chem., 180, 2019
5MQL
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BU of 5mql by Molmil
Crystal structure of dCK mutant C3S in complex with masitinib and UDP
分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, Deoxycytidine kinase, MAGNESIUM ION, ...
著者Rebuffet, E, Hammam, K, Saez-Ayala, M, Gros, L, Lopez, S, Hajem, B, Humbert, M, Baudelet, E, Audebert, S, Betzi, S, Lugari, A, Combes, S, Pez, D, Letard, S, Mansfield, C, Moussy, A, de Sepulveda, P, Morelli, X, Dubreuil, P.
登録日2016-12-20
公開日2017-11-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Dual protein kinase and nucleoside kinase modulators for rationally designed polypharmacology.
Nat Commun, 8, 2017
6F1U
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N terminal region of dynein tail domains in complex with dynactin filament and BICDR-1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ARP1 actin related protein 1 homolog A, BICD family-like cargo adapter 1, ...
著者Urnavicius, L, Lau, C.K, Elshenawy, M.M, Morales-Rios, E, Motz, C, Yildiz, A, Carter, A.P.
登録日2017-11-23
公開日2018-01-17
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM shows how dynactin recruits two dyneins for faster movement.
Nature, 554, 2018
4XMV
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BU of 4xmv by Molmil
Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-Arginine
分子名称: ARGININE, Aminopeptidase N, GLYCEROL, ...
著者Addlagatta, A, Gumpena, R, Kishor, C.
登録日2015-01-15
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with L-arginine
To Be Published
6RSM
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BU of 6rsm by Molmil
Solution NMR structure of the peptide 12530 from medicinal leech Hirudo medicinalis in dodecylphosphocholine micelles
分子名称: peptide 12530
著者Talyzina, I.A, Nadezhdin, K.D, Grafskaia, E.N, Arseniev, A.S, Lazarev, V.N.
登録日2019-05-21
公開日2019-07-24
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Medicinal leech antimicrobial peptides lacking toxicity represent a promising alternative strategy to combat antibiotic-resistant pathogens.
Eur.J.Med.Chem., 180, 2019
6F38
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Cryo-EM structure of two dynein tail domains bound to dynactin and HOOK3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ARP1 actin related protein 1 homolog A, ...
著者Lau, C.K, Urnavicius, L, Elshenawy, M.M, Morales-Rios, E, Motz, C, Yildiz, A, Carter, A.P.
登録日2017-11-28
公開日2018-01-17
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (6.7 Å)
主引用文献Cryo-EM shows how dynactin recruits two dyneins for faster movement.
Nature, 554, 2018
7Z14
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Cryo-EM structure of Torpedo nicotinic acetylcholine receptor in complex with a short-chain neurotoxin.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine receptor subunit alpha, ...
著者Nys, M.A.E.M, Zarkadas, E, Ulens, C, Nury, H.
登録日2022-02-24
公開日2022-08-17
最終更新日2022-08-24
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献The molecular mechanism of snake short-chain alpha-neurotoxin binding to muscle-type nicotinic acetylcholine receptors.
Nat Commun, 13, 2022
7KKL
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SARS-CoV-2 Spike in complex with neutralizing nanobody mNb6
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Schoof, M.S, Faust, B.F, Saunders, R.A, Sangwan, S, Rezelj, V, Hoppe, N, Boone, M, Billesboelle, C.B, Puchades, C, Azumaya, C.M, Kratochvil, H.T, Zimanyi, M, Desphande, I, Liang, J, Dickinson, S, Nguyen, H.C, Chio, C.M, Merz, G.E, Thompson, M.C, Diwanji, D, Schaefer, K, Anand, A.A, Dobzinski, N, Zha, B.S, Simoneau, C.R, Leon, K, White, K.M, Chio, U.S, Gupta, M, Jin, M, Li, F, Liu, Y, Zhang, K, Bulkley, D, Sun, M, Smith, A.M, Rizo, A.N, Moss, F, Brilot, A.F, Pourmal, S, Trenker, R, Pospiech, T, Gupta, S, Barsi-Rhyne, B, Belyy, V, Barile-Hill, A.W, Nock, S, Liu, Y, Krogan, N.J, Ralston, C.Y, Swaney, D.L, Garcia-Sastre, A, Ott, M, Vignuzzi, M, Walter, P, Manglik, A, QCRG Structural Biology Consortium
登録日2020-10-27
公開日2020-11-11
最終更新日2021-04-21
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献An ultrapotent synthetic nanobody neutralizes SARS-CoV-2 by stabilizing inactive Spike.
Science, 370, 2020
8SL8
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BU of 8sl8 by Molmil
Cryo-EM structure of the rat TRPM5 channel in trace calcium, trace-1
分子名称: Transient receptor potential cation channel subfamily M member 5
著者Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
登録日2023-04-21
公開日2024-07-03
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024
6V8O
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BU of 6v8o by Molmil
RSC core
分子名称: Chromatin structure-remodeling complex protein RSC14, Chromatin structure-remodeling complex protein RSC3, Chromatin structure-remodeling complex protein RSC30, ...
著者Patel, A.B, Moore, C.M, Greber, B.J, Nogales, E.
登録日2019-12-11
公開日2020-01-15
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Architecture of the chromatin remodeler RSC and insights into its nucleosome engagement.
Elife, 8, 2019
5K79
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Structure and anti-HIV activity of CYT-CVNH, a new cyanovirin-n homolog
分子名称: 1,2-ETHANEDIOL, Cyanovirin-N domain protein, DI(HYDROXYETHYL)ETHER
著者Matei, E, Basu, R, Furey, W, Shi, J, Calnan, C, Aiken, C, Gronenborn, A.M.
登録日2016-05-25
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure and Glycan Binding of a New Cyanovirin-N Homolog.
J.Biol.Chem., 291, 2016
6F58
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Crystal structure of human Brachyury (T) in complex with DNA
分子名称: Brachyury protein, DNA (5'-D(*AP*AP*TP*TP*TP*CP*AP*CP*AP*CP*CP*TP*AP*GP*GP*TP*GP*TP*GP*AP*AP*AP*TP*T)-3'), SODIUM ION
著者Newman, J.A, Gavard, A.E, Krojer, T, Shrestha, L, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
登録日2017-12-01
公開日2017-12-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.253 Å)
主引用文献Crystal structure of human Brachyury (T) in complex with DNA
To Be Published
6S98
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Crystal structure of the catalytic domain of UBE2S WT.
分子名称: 1,2-ETHANEDIOL, ACETATE ION, SODIUM ION, ...
著者Liess, A.K.L, Lorenz, S.
登録日2019-07-11
公開日2020-10-21
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Dimerization regulates the human APC/C-associated ubiquitin-conjugating enzyme UBE2S.
Sci.Signal., 13, 2020
6S9N
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BU of 6s9n by Molmil
Designed Armadillo Repeat protein Lock2 fused to target peptide KRKRKAKLSF
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Lock2_KRKRKAKLSF
著者Ernst, P, Zosel, F, Reichen, C, Schuler, B, Pluckthun, A.
登録日2019-07-15
公開日2020-02-19
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-Guided Design of a Peptide Lock for Modular Peptide Binders.
Acs Chem.Biol., 15, 2020
6F5Q
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BU of 6f5q by Molmil
Crystal Structure of KDM4D with GF026 ligand
分子名称: 1,2-ETHANEDIOL, 2-[2-(methylsulfonylamino)ethylamino]pyridine-4-carboxylic acid, CHLORIDE ION, ...
著者Malecki, P.H, Link, A, Weiss, M.S, Heinemann, U.
登録日2017-12-02
公開日2018-12-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Crystal Structure of KDM4D with GF026 ligand
To be published
6SBO
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BU of 6sbo by Molmil
Estrogen receptor mutant L536S
分子名称: 6-(2,4-dichlorophenyl)-5-[4-[(3~{S})-1-(3-fluoranylpropyl)pyrrolidin-3-yl]oxyphenyl]-8,9-dihydro-7~{H}-benzo[7]annulene-2-carboxylic acid, Estrogen receptor
著者Vallee, F, Steier, V, Rak, A.
登録日2019-07-22
公開日2019-11-27
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Discovery of 6-(2,4-Dichlorophenyl)-5-[4-[(3S)-1-(3-fluoropropyl)pyrrolidin-3-yl]oxyphenyl]-8,9-dihydro-7H-benzo[7]annulene-2-carboxylic acid (SAR439859), a Potent and Selective Estrogen Receptor Degrader (SERD) for the Treatment of Estrogen-Receptor-Positive Breast Cancer.
J.Med.Chem., 63, 2020
6VBM
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BU of 6vbm by Molmil
Crystal structure of a S310A mutant of PBP2 from Neisseria gonorrhoeae
分子名称: PHOSPHATE ION, Probable peptidoglycan D,D-transpeptidase PenA
著者Singh, A, Davies, C.
登録日2019-12-19
公開日2020-04-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Mutations in Neisseria gonorrhoeae penicillin-binding protein 2 associated with extended-spectrum cephalosporin resistance create an energetic barrier against acylation via restriction of protein dynamics
J.Biol.Chem., 2020
5JY8
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An iron-bound structure of the isochorismate synthase EntC
分子名称: (3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acid, FE (III) ION, Isochorismate synthase EntC
著者Meneely, K.M, Sundlov, J.A, Gulick, A.M, Lamb, A.L.
登録日2016-05-13
公開日2016-07-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.942 Å)
主引用文献An Open and Shut Case: The Interaction of Magnesium with MST Enzymes.
J.Am.Chem.Soc., 138, 2016
8KB6
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Crystal Structure of Canine TNF-alpha
分子名称: Tumor necrosis factor
著者Lee, C.C, Wang, A.H.-J.
登録日2023-08-03
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.850166 Å)
主引用文献Structure-based development of a canine TNF-alpha-specific antibody using adalimumab as a template.
Protein Sci., 33, 2024
4XQU
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BU of 4xqu by Molmil
Crystal structure of hemagglutinin from Jiangxi-Donghu (2013) H10N8 influenza virus in complex with 3'-SLN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
著者Tzarum, N, Zhang, H, Zhu, X, Wilson, I.A.
登録日2015-01-20
公開日2015-04-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献A Human-Infecting H10N8 Influenza Virus Retains a Strong Preference for Avian-type Receptors.
Cell Host Microbe, 17, 2015

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件を2024-07-31に公開中

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