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PDB: 88675 件

6ET6
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Crystal structure of muramidase from Acinetobacter baumannii AB 5075UW prophage
分子名称: GLYCEROL, Lysozyme, SULFATE ION
著者Boyko, K.M, Nikolaeva, A.Y, Sykilinda, N.N, Shneider, M.M, Miroshnikov, K.A, Popov, V.O.
登録日2017-10-25
公開日2018-09-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure of anAcinetobacterBroad-Range Prophage Endolysin Reveals a C-Terminal alpha-Helix with the Proposed Role in Activity against Live Bacterial Cells.
Viruses, 10, 2018
4XFM
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Crystal structure of a domain of unknown function (DUF1537) from Pectobacterium atrosepticum (ECA3761), Target EFI-511609, with bound D-threonate, domain swapped dimer
分子名称: THREONATE ION, Uncharacterized protein
著者Vetting, M.W, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-12-27
公開日2015-04-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Assignment of function to a domain of unknown function: DUF1537 is a new kinase family in catabolic pathways for acid sugars.
Proc.Natl.Acad.Sci.USA, 113, 2016
8SR5
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particulate methane monooxygenase potassium cyanide treated
分子名称: Ammonia monooxygenase/methane monooxygenase, subunit C family protein, COPPER (II) ION, ...
著者Tucci, F.J, Rosenzweig, A.C.
登録日2023-05-05
公開日2023-11-29
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Product analog binding identifies the copper active site of particulate methane monooxygenase.
Nat Catal, 6, 2023
4XGJ
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Crystal structure of a domain of unknown function (DUF1537) from Pectobacterium atrosepticum (ECA3761), Target EFI-511609, APO structure, domain swapped dimer
分子名称: Uncharacterized protein
著者Vetting, M.W, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-12-30
公開日2015-02-18
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Assignment of function to a domain of unknown function: DUF1537 is a new kinase family in catabolic pathways for acid sugars.
Proc.Natl.Acad.Sci.USA, 113, 2016
8GMH
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Crystal Structure of the ternary complex of TelA-LXG, LapA3, and LapA4
分子名称: 1,2-ETHANEDIOL, LXG domain-containing protein, LapA3, ...
著者Klein, T.A, Shah, P.Y, Gkragkopoulou, P, Grebenc, D.W, Kim, Y, Whitney, J.C.
登録日2023-03-25
公開日2024-01-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of a tripartite protein complex that targets toxins to the type VII secretion system.
Proc.Natl.Acad.Sci.USA, 121, 2024
7AST
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Apo Human RNA Polymerase III
分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
著者Ramsay, E.P, Abascal-Palacios, G, Daiss, J.L, King, H, Gouge, J, Pilsl, M, Beuron, F, Morris, E, Gunkel, P, Engel, C, Vannini, A.
登録日2020-10-28
公開日2020-12-23
最終更新日2020-12-30
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structure of human RNA polymerase III.
Nat Commun, 11, 2020
5LWW
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Crystal structure of a laccase-like multicopper oxidase McoG from Aspergillus niger bound to zinc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Ferraroni, M, Briganti, F, Tamayo-Ramos, J.A, van Berkel, W.J.H, Westphal, A.H.
登録日2016-09-19
公開日2017-05-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structure and function of Aspergillus niger laccase McoG
Biocatalysis, 2017
5IQM
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Crystal structure of the E. coli type 1 pilus subunit FimG (engineered variant with substitution Q134E; N-terminal FimG residues 1-12 truncated) in complex with the donor strand peptide DsF_T4R-T6R-D13N
分子名称: COBALT (II) ION, Protein FimF, Protein FimG
著者Giese, C, Eras, J, Kern, A, Scharer, M.A, Capitani, G, Glockshuber, R.
登録日2016-03-11
公開日2016-07-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Accelerating the Association of the Most Stable Protein-Ligand Complex by More than Two Orders of Magnitude.
Angew.Chem.Int.Ed.Engl., 55, 2016
6OTQ
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Carbonic Anhydrase II complexed with ureic benzene sulfonamide MB10-596B
分子名称: 4-hydroxy-3-{[(4-hydroxybutyl)carbamoyl]amino}benzene-1-sulfonamide, Carbonic anhydrase 2, DIMETHYL SULFOXIDE, ...
著者Kota, A, McKenna, R.
登録日2019-05-03
公開日2020-05-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.467 Å)
主引用文献Carbonic Anhydrase II complexed with benzene sulfonamide MB9-561B
To Be Published
4XH9
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CRYSTAL STRUCTURE OF HUMAN RHOA IN COMPLEX WITH DH/PH FRAGMENT OF THE GUANINE NUCLEOTIDE EXCHANGE FACTOR NET1
分子名称: Neuroepithelial cell-transforming gene 1 protein, Transforming protein RhoA
著者Garcia, C, Petit, P, Boutin, J.A, Ferry, G, Vuillard, L.
登録日2015-01-05
公開日2015-01-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A structural study of the complex between neuroepithelial cell transforming gene 1 (Net1) and RhoA reveals a potential anticancer drug hot spot.
J. Biol. Chem., 293, 2018
6UAM
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Apo-form Dimer of Y77A Mutant Putative Ryanodine Receptor from Bacteroides thetaiotaomicron VPI-5482
分子名称: CITRIC ACID, GLYCEROL, Putative ryanodine receptor
著者Wu, R, Joachimiak, A, Jedrzejczak, R, Midwest Center for Structural Genomics (MCSG)
登録日2019-09-11
公開日2020-08-05
実験手法X-RAY DIFFRACTION (2.802 Å)
主引用文献Apo-form Dimer of Y77A Mutant Putative Ryanodine Receptor from Bacteroides thetaiotaomicron VPI-5482
To Be Published
6R71
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Crystal structure of human carbonic anhydrase isozyme XII with 2-(benzenesulfonyl)-4-chloro-N-(2-hydroxyethyl)-5-sulfamoyl-benzamide
分子名称: 1,2-ETHANEDIOL, 4-chloranyl-~{N}-(2-hydroxyethyl)-2-(phenylsulfonyl)-5-sulfamoyl-benzamide, Carbonic anhydrase 12, ...
著者Smirnov, A, Manakova, E, Grazulis, S.
登録日2019-03-28
公開日2020-04-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Halogenated and di-substituted benzenesulfonamides as selective inhibitors of carbonic anhydrase isoforms.
Eur.J.Med.Chem., 185, 2020
8T86
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Racemic mixture of amylin segment 25-AILSS-29 forms heterochiral rippled beta-sheet
分子名称: Racemic mixture of amylin segment 25-AILSS-29
著者Sawaya, M.R, Raskatov, J.A, Hazari, A, Sajimon, M.
登録日2023-06-21
公開日2023-11-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.102 Å)
主引用文献Racemic Peptides from Amyloid beta and Amylin Form Rippled beta-Sheets Rather Than Pleated beta-Sheets.
J.Am.Chem.Soc., 145, 2023
6F2A
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Crystal structure of the complex Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO1 with Fe(II)/Lysine
分子名称: ACETIC ACID, CHLORIDE ION, FE (II) ION, ...
著者Isabet, T, Stura, E.A, Legrand, P, Zaparucha, A, Bastard, K.
登録日2017-11-24
公開日2018-11-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family.
Sci Rep, 8, 2018
5IPZ
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Crystal structure of human carbonic anhydrase isozyme IV with 5-(2-amino-1,3-thiazol-4-yl)-2-chlorobenzenesulfonamide
分子名称: 5-(2-amino-1,3-thiazol-4-yl)-2-chlorobenzene-1-sulfonamide, Carbonic anhydrase 4, ZINC ION
著者Smirnov, A, Manakova, E, Grazulis, S.
登録日2016-03-10
公開日2017-03-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Intrinsic thermodynamics of high affinity inhibitor binding to recombinant human carbonic anhydrase IV.
Eur. Biophys. J., 47, 2018
4XI1
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Crystal structure of U-box 2 of LubX / LegU2 / Lpp2887 from Legionella pneumophila str. Paris, wild-type
分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase LubX, GLYCEROL, ...
著者Stogios, P.J, Quaile, T, Skarina, T, Cuff, M, Di Leo, R, Yim, V, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2015-01-06
公開日2015-01-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.983 Å)
主引用文献Molecular Characterization of LubX: Functional Divergence of the U-Box Fold by Legionella pneumophila.
Structure, 23, 2015
6RAJ
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BU of 6raj by Molmil
Heterodimeric ABC exporter TmrAB in vanadate trapped outward-facing open conformation
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ADP ORTHOVANADATE, MAGNESIUM ION, ...
著者Thomas, C, Januliene, D, Mehdipour, A.R, Hofmann, S, Hummer, G, Moeller, A, Tampe, R.
登録日2019-04-06
公開日2019-07-31
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Conformation space of a heterodimeric ABC exporter under turnover conditions.
Nature, 571, 2019
5LHW
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Central Coiled-Coil Domain of Human STIL
分子名称: HEXAETHYLENE GLYCOL, SCL-interrupting locus protein
著者Cottee, M.A, Lea, S.M.
登録日2016-07-13
公開日2017-03-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (0.91 Å)
主引用文献A key centriole assembly interaction interface between human PLK4 and STIL appears to not be conserved in flies.
Biol Open, 6, 2017
6EZZ
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Crystal structure of Escherichia coli amine oxidase mutant E573Q
分子名称: CALCIUM ION, COPPER (II) ION, GLYCEROL, ...
著者Gaule, T.G, Smith, M.A, Tych, K.M, Pirrat, P, Trinh, C.H, Pearson, A.R, Knowles, P.F, McPherson, M.J.
登録日2017-11-16
公開日2018-08-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Oxygen Activation Switch in the Copper Amine Oxidase of Escherichia coli.
Biochemistry, 57, 2018
8ONF
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Crystal structure of Bdellovibrio bacteriovorus Bd2439 fibre C-terminal domains with ethylene glycol
分子名称: 1,2-ETHANEDIOL, Cell wall surface anchor family protein
著者Caulton, S.G, Lovering, A.L.
登録日2023-04-02
公開日2023-10-25
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
6F6R
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Crystal structure of human Caspase-1 with N-{3-[1-((S)-2-Hydroxy-5-oxo-tetrahydro-furan-3-ylcarbamoyl)-ethyl]-1-methyl-2,4-dioxo-1,2,3,4-tetrahydro-pyrimidin-5-yl}-4-(quinoxalin-2-ylamino)-benzamide
分子名称: (3~{S})-3-[[(2~{R})-2-[3-methyl-2,6-bis(oxidanylidene)-5-[[4-(quinoxalin-2-ylamino)phenyl]carbonylamino]pyrimidin-1-yl]propanoyl]amino]-4-oxidanyl-butanoic acid, Caspase-1, SULFATE ION
著者Fournier, J.F, Clary, L, Chambon, S, Dumais, L, Harris, C.S, Millois-Barbuis, C, Pierre, R, Talano, S, Thoreau, E, Aubert, J, Aurelly, M, Bouix-Peter, C, Brethon, A, Chantalat, L, Christin, O, Comino, C, El-Bazbouz, G, Ghilini, A.L, Isabet, T, Lardy, C, Luzy, A.P, Mathieu, C, Mebrouk, K, Orfila, D, Pascau, J, Reverse, K, Roche, D, Rodeschini, V, Hennequin, L.F.
登録日2017-12-06
公開日2018-05-02
最終更新日2018-05-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Rational Drug Design of Topically Administered Caspase 1 Inhibitors for the Treatment of Inflammatory Acne.
J. Med. Chem., 61, 2018
8T82
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Racemic mixture of amyloid beta segment 35-MVGGVV-40 forms heterochiral rippled beta-sheet, includes pentafluoropropionic acid
分子名称: amyloid beta segment 35-MVGGVV-40, racemic mixture, pentafluoropropanoic acid
著者Sawaya, M.R, Raskatov, J.A, Hazari, A.
登録日2023-06-21
公開日2023-11-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Racemic Peptides from Amyloid beta and Amylin Form Rippled beta-Sheets Rather Than Pleated beta-Sheets.
J.Am.Chem.Soc., 145, 2023
6F0F
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Crystal structure ASF1-ip2_s
分子名称: Histone chaperone ASF1A, ip2_s
著者Gaubert, A, Guichard, B, Murciano, B, Le Du, M.H, Ochsenbein, F, Guerois, R, Andreani, J.
登録日2017-11-20
公開日2019-06-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Design on a Rational Basis of High-Affinity Peptides Inhibiting the Histone Chaperone ASF1.
Cell Chem Biol, 26, 2019
8T89
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Racemic mixture of amyloid beta segment 16-KLVFFA-21 forms heterochiral rippled beta-sheet
分子名称: Racemic mixture of amyloid beta segment 16-KLVFFA-21, trifluoroacetic acid
著者Sawaya, M.R, Raskatov, J.A, Hazari, A.
登録日2023-06-22
公開日2023-11-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Racemic Peptides from Amyloid beta and Amylin Form Rippled beta-Sheets Rather Than Pleated beta-Sheets.
J.Am.Chem.Soc., 145, 2023
8SOS
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Human CD1d presenting sphingomyelin C24:1 in complex with VHH nanobody 1D17
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d, Beta-2-microglobulin, ...
著者Shahine, A, Rossjohn, J.
登録日2023-04-29
公開日2023-12-13
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Enhanced CD1d phosphatidylserine presentation using a single-domain antibody promotes immunomodulatory CD1d-TIM-3 interactions.
J Immunother Cancer, 11, 2023

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件を2024-07-31に公開中

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