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PDB: 88675 件

8G5M
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Cryo-EM structure of the Mismatch Locking Complex (III) of Human Mitochondrial DNA Polymerase Gamma
分子名称: DNA polymerase subunit gamma-1, DNA polymerase subunit gamma-2, mitochondrial, ...
著者Nayak, A.R, Buchel, G, Herbine, K.H, Sarfallah, A, Sokolova, V.O, Zamudio-Ochoa, A, Temiakov, D.
登録日2023-02-13
公開日2024-01-10
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Structural basis for DNA proofreading.
Nat Commun, 14, 2023
8G5J
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Cryo-EM structure of the Mismatch Uncoupling Complex (II) of Human Mitochondrial DNA Polymerase Gamma
分子名称: DNA polymerase subunit gamma-1, DNA polymerase subunit gamma-2, mitochondrial, ...
著者Nayak, A.R, Buchel, G, Herbine, K.H, Sarfallah, A, Sokolova, V.O, Zamudio-Ochoa, A, Temiakov, D.
登録日2023-02-13
公開日2024-01-10
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献Structural basis for DNA proofreading.
Nat Commun, 14, 2023
8G5L
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Cryo-EM structure of the Primer Separation Complex (IX) of Human Mitochondrial DNA Polymerase Gamma
分子名称: DNA polymerase subunit gamma-1, DNA polymerase subunit gamma-2, mitochondrial, ...
著者Nayak, A.R, Buchel, G, Herbine, K.H, Sarfallah, A, Sokolova, V.O, Zamudio-Ochoa, A, Temiakov, D.
登録日2023-02-13
公開日2024-01-10
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for DNA proofreading.
Nat Commun, 14, 2023
6XIP
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The 1.5 A Crystal Structure of the Co-factor Complex of NSP7 and the C-terminal Domain of NSP8 from SARS CoV-2
分子名称: 1,2-ETHANEDIOL, Non-structural protein 7, Non-structural protein 8
著者Wilamowski, M, Kim, Y, Jedrzejczak, R, Maltseva, N, Endres, M, Godzik, A, Michalska, K, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-06-20
公開日2020-07-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Transient and stabilized complexes of Nsp7, Nsp8, and Nsp12 in SARS-CoV-2 replication.
Biophys.J., 120, 2021
8G5P
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Cryo-EM structure of the Guide loop Engagement Complex (V) of Human Mitochondrial DNA Polymerase Gamma
分子名称: DNA polymerase subunit gamma-1, DNA polymerase subunit gamma-2, mitochondrial, ...
著者Nayak, A.R, Buchel, G, Herbine, K.H, Sarfallah, A, Sokolova, V.O, Zamudio-Ochoa, A, Temiakov, D.
登録日2023-02-13
公開日2024-01-10
実験手法ELECTRON MICROSCOPY (2.78 Å)
主引用文献Structural basis for DNA proofreading.
Nat Commun, 14, 2023
7PM2
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BU of 7pm2 by Molmil
Cryo-EM structure of the actomyosin-V complex in the rigor state (central 1er, young JASP-stabilized F-actin, class 4)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Pospich, S, Sweeney, H.L, Houdusse, A, Raunser, S.
登録日2021-09-01
公開日2021-12-22
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献High-resolution structures of the actomyosin-V complex in three nucleotide states provide insights into the force generation mechanism.
Elife, 10, 2021
6ETS
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BU of 6ets by Molmil
Crystal structure of KDM4D with tetrazolhydrazide compound 1
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysine-specific demethylase 4D, ...
著者Malecki, P.H, Link, A, Weiss, M.S, Heinemann, U.
登録日2017-10-27
公開日2019-02-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.333 Å)
主引用文献Structure-Based Screening of Tetrazolylhydrazide Inhibitors versus KDM4 Histone Demethylases.
Chemmedchem, 14, 2019
7RU4
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CC6.33 IgG in complex with SARS-CoV-2-6P-Mut7 S protein (RBD/Fv local refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CC6.33 IgG heavy chain Fv, ...
著者Ozorowski, G, Turner, H.L, Ward, A.B.
登録日2021-08-16
公開日2022-08-24
最終更新日2022-09-14
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Engineering SARS-CoV-2 neutralizing antibodies for increased potency and reduced viral escape pathways.
Iscience, 25, 2022
8G5O
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Cryo-EM structure of the Guide loop Engagement Complex (IV) of Human Mitochondrial DNA Polymerase Gamma
分子名称: DNA polymerase subunit gamma-1, DNA polymerase subunit gamma-2, mitochondrial, ...
著者Nayak, A.R, Buchel, G, Herbine, K.H, Sarfallah, A, Sokolova, V.O, Zamudio-Ochoa, A, Temiakov, D.
登録日2023-02-13
公開日2024-01-10
実験手法ELECTRON MICROSCOPY (2.61 Å)
主引用文献Structural basis for DNA proofreading.
Nat Commun, 14, 2023
8BTM
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Structural and functional studies of geldanamycin amide synthase ShGdmF
分子名称: 1,2-ETHANEDIOL, ACETATE ION, GdmF
著者Ewert, W, Zeilinger, C, Kirschning, A, Preller, M.
登録日2022-11-29
公開日2024-06-12
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural and functional studies of geldanamycin amide synthase ShGdmF
To Be Published
8GJG
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De novo design of high-affinity protein binders to bioactive helical peptides
分子名称: gluc_A04_0005, gluc_A04_0005 Binder
著者Leung, P.J.Y, Bera, A.K, Torres, S.V, Baker, D, Kang, A.
登録日2023-03-15
公開日2024-01-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献De novo design of high-affinity binders of bioactive helical peptides.
Nature, 626, 2024
5LCF
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VIM-2 metallo-beta-lactamase in complex with 3-oxo-2-phenylisoindoline-4-carboxylic acid (compound 30)
分子名称: 3-oxidanylidene-2-phenyl-1~{H}-isoindole-4-carboxylic acid, GLYCEROL, MAGNESIUM ION, ...
著者Li, G.-B, Brem, J, McDonough, M.A, Schofield, C.J.
登録日2016-06-21
公開日2017-02-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献NMR-filtered virtual screening leads to non-metal chelating metallo-beta-lactamase inhibitors.
Chem Sci, 8, 2017
6F0G
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Crystal structure ASF1-ip3
分子名称: Histone chaperone ASF1A, SULFATE ION, ip3
著者Gaubert, A, Guichard, B, Richet, N, Le Du, M.H, Andreani, J, Guerois, R, Ochsenbein, F.
登録日2017-11-20
公開日2019-06-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Design on a Rational Basis of High-Affinity Peptides Inhibiting the Histone Chaperone ASF1.
Cell Chem Biol, 26, 2019
6U9L
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Imidazole-triggered RAS-specific subtilisin SUBT_BACAM
分子名称: GLYCEROL, POTASSIUM ION, SUBTILISIN BPN', ...
著者Toth, E.A, Bryan, P.N, Orban, J.
登録日2019-09-09
公開日2020-09-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Engineering subtilisin proteases that specifically degrade active RAS.
Commun Biol, 4, 2021
7PLV
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BU of 7plv by Molmil
Cryo-EM structure of the actomyosin-V complex in the rigor state (central 1er, class 1)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Pospich, S, Sweeney, H.L, Houdusse, A, Raunser, S.
登録日2021-09-01
公開日2021-12-22
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献High-resolution structures of the actomyosin-V complex in three nucleotide states provide insights into the force generation mechanism.
Elife, 10, 2021
7PM3
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BU of 7pm3 by Molmil
Cryo-EM structure of young JASP-stabilized F-actin (central 3er)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Pospich, S, Sweeney, H.L, Houdusse, A, Raunser, S.
登録日2021-09-01
公開日2021-12-22
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献High-resolution structures of the actomyosin-V complex in three nucleotide states provide insights into the force generation mechanism.
Elife, 10, 2021
6OTN
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Crystal Structure of an N-terminal Fragment of Cancer Associated Tropomyosin 3.1 (Tpm3.1)
分子名称: SULFATE ION, Tropomyosin alpha-3 chain
著者Rynkiewicz, M.J, Ghosh, A, Lehman, W.J, Janco, M, Gunning, P.W.
登録日2019-05-03
公開日2019-08-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular integration of the anti-tropomyosin compound ATM-3507 into the coiled coil overlap region of the cancer-associated Tpm3.1.
Sci Rep, 9, 2019
7PLX
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Cryo-EM structure of the actomyosin-V complex in the rigor state (central 1er, class 4)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Pospich, S, Sweeney, H.L, Houdusse, A, Raunser, S.
登録日2021-09-01
公開日2021-12-22
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献High-resolution structures of the actomyosin-V complex in three nucleotide states provide insights into the force generation mechanism.
Elife, 10, 2021
6U9S
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Crystal structure of human CD81 large extracellular loop in complex with 5A6 Fab
分子名称: 5A6 FAB Heavy Chain, 5A6 FAB Light Chain, CD81 antigen, ...
著者Susa, K.J, Seegar, T.C.M, Blacklow, S.C.B, Kruse, A.C.
登録日2019-09-09
公開日2020-05-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A dynamic interaction between CD19 and the tetraspanin CD81 controls B cell co-receptor trafficking.
Elife, 9, 2020
5IQS
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WelO5 bound to Fe(II), Cl, and 2-oxoglutarate
分子名称: 2-OXOGLUTARIC ACID, CHLORIDE ION, FE (II) ION, ...
著者Mitchell, A.J, Ananth, N, Boal, A.K.
登録日2016-03-11
公開日2016-06-29
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for halogenation by iron- and 2-oxo-glutarate-dependent enzyme WelO5.
Nat.Chem.Biol., 12, 2016
6OTW
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Crystallographic Structure of (HbII-HbIII)-O2 from Lucina pectinata at pH 5.0
分子名称: Hemoglobin II, Hemoglobin III, PROTOPORPHYRIN IX CONTAINING FE
著者Marchany-Rivera, D, Smith, C.A, Rodriguez-Perez, J.D, Lopez-Garriga, J.
登録日2019-05-03
公開日2020-04-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.447 Å)
主引用文献Lucina pectinata oxyhemoglobin (II-III) heterodimer pH susceptibility.
J.Inorg.Biochem., 207, 2020
6F22
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Complex between MTH1 and compound 29 (a 4-amino-2,7-diazaindole derivative)
分子名称: (3~{S})-3-phenyl-4-(2~{H}-pyrazolo[3,4-b]pyridin-4-yl)morpholine, 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION
著者Viklund, J, Talagas, A, Tresaugues, L, Andersson, M, Ericsson, U, Forsblom, R, Ginman, T, Hallberg, K, Lindstrom, J, Persson, L, Silvander, C, Rahm, F.
登録日2017-11-23
公開日2018-03-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Creation of a Novel Class of Potent and Selective MutT Homologue 1 (MTH1) Inhibitors Using Fragment-Based Screening and Structure-Based Drug Design.
J. Med. Chem., 61, 2018
5LY1
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JMJD2A/ KDM4A COMPLEXED WITH NI(II) AND Macrocyclic PEPTIDE Inhibitor CP2 (13-mer)
分子名称: CHLORIDE ION, CP2, GLYCEROL, ...
著者King, O.N.F, Chowdhury, R, Kawamura, A, Schofield, C.J.
登録日2016-09-23
公開日2017-04-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Highly selective inhibition of histone demethylases by de novo macrocyclic peptides.
Nat Commun, 8, 2017
6OTY
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Crystallographic Structure of (HbII-HbIII)-O2 from Lucina pectinata at pH 4.0
分子名称: Hemoglobin II, Hemoglobin III, PROTOPORPHYRIN IX CONTAINING FE
著者Marchany-Rivera, D, Smith, C.A, Rodriguez-Perez, J.D, Lopez-Garriga, J.
登録日2019-05-03
公開日2020-04-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Lucina pectinata oxyhemoglobin (II-III) heterodimer pH susceptibility.
J.Inorg.Biochem., 207, 2020
7PLT
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BU of 7plt by Molmil
Cryo-EM structure of the actomyosin-V complex in the rigor state (central 1er)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Pospich, S, Sweeney, H.L, Houdusse, A, Raunser, S.
登録日2021-09-01
公開日2021-12-22
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献High-resolution structures of the actomyosin-V complex in three nucleotide states provide insights into the force generation mechanism.
Elife, 10, 2021

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件を2024-07-31に公開中

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