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PDB: 88608 件

3EBC
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Structure of N141A HincII with Cognate DNA
分子名称: 5'-D(*DGP*DCP*DCP*DCP*DGP*DTP*DCP*DGP*DAP*DCP*DCP*DGP*DGP*DC)-3', 5'-D(*DGP*DCP*DCP*DGP*DGP*DTP*DCP*DGP*DAP*DCP*DGP*DGP*DGP*DC)-3', MANGANESE (II) ION, ...
著者Little, E.J, Babic, A.C, Horton, N.C.
登録日2008-08-27
公開日2008-12-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Early Interrogation and Recognition of DNA Sequence by Indirect Readout
Structure, 16, 2008
6IUE
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BU of 6iue by Molmil
DNA helical wire containing Hg(II)
分子名称: DNA (5'-D(*TP*TP*TP*GP*C)-3'), MERCURY (II) ION
著者Ono, A, Kanazawa, H, Ito, H, Goto, M, Nakamura, K, Saneyoshi, H, Kondo, J.
登録日2018-11-28
公開日2019-10-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献A Novel DNA Helical Wire Containing HgII-Mediated T:T and T:G Pairs.
Angew.Chem.Int.Ed.Engl., 58, 2019
4UWT
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BU of 4uwt by Molmil
Hypocrea jecorina Cel7A E212Q mutant in complex with p-nitrophenyl cellobioside
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CELLOBIOHYDROLASE CEL7A, COBALT (II) ION, ...
著者Nutt, A, Momeni, M.H, Johansson, G, Stahlberg, J.
登録日2014-08-14
公開日2015-08-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Enzyme kinetics by GH7 cellobiohydrolases on chromogenic substrates is dictated by non-productive binding: insights from crystal structures and MD simulation.
Febs J., 2022
2HGF
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BU of 2hgf by Molmil
HAIRPIN LOOP CONTAINING DOMAIN OF HEPATOCYTE GROWTH FACTOR, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: HEPATOCYTE GROWTH FACTOR
著者Zhou, H, Mazzulla, M.J, Kaufman, J.D, Stahl, S.J, Wingfield, P.T, Rubin, J.S, Bottaro, D.P, Byrd, R.A.
登録日1997-12-18
公開日1998-06-24
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献The solution structure of the N-terminal domain of hepatocyte growth factor reveals a potential heparin-binding site.
Structure, 6, 1998
1T6H
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BU of 1t6h by Molmil
Crystal Structure T4 Lysozyme incorporating an unnatural amino acid p-iodo-L-phenylalanine at position 153
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, Lysozyme
著者Spraggon, G, Xie, J, Wang, L, Wu, N, Brock, A, Schultz, P.G.
登録日2004-05-06
公開日2004-10-26
最終更新日2018-02-14
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献The site-specific incorporation of p-iodo-L-phenylalanine into proteins for structure determination.
Nat.Biotechnol., 22, 2004
4QPP
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BU of 4qpp by Molmil
The Crystal Structure of Human HMT1 hnRNP methyltransferase-like protein 6 in complex with compound DS-421 (2-{4-[3-CHLORO-2-(2-METHOXYPHENYL)-1H-INDOL-5-YL]PIPERIDIN-1-YL}-N-METHYLETHANAMINE
分子名称: 2-{4-[3-chloro-2-(2-methoxyphenyl)-1H-indol-5-yl]piperidin-1-yl}-N-methylethanamine, POLY-UNK, Protein arginine N-methyltransferase 6, ...
著者Dong, A, Zeng, H, Smil, D, Walker, J.R, He, H, Eram, M, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Vedadi, M, Brown, P.J, Wu, H, Structural Genomics Consortium (SGC)
登録日2014-06-24
公開日2014-08-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献The Crystal Structure of Human HMT1 hnRNP methyltransferase-like protein 6 in complex with compound DS-421
To be Published
8A0E
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BU of 8a0e by Molmil
CryoEM structure of DHS-eIF5A1 complex
分子名称: Deoxyhypusine synthase, Eukaryotic translation initiation factor 5A, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Wator, E, Wilk, P, Biela, A.P, Rawski, M, Grudnik, P.
登録日2022-05-27
公開日2023-04-05
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Cryo-EM structure of human eIF5A-DHS complex reveals the molecular basis of hypusination-associated neurodegenerative disorders.
Nat Commun, 14, 2023
1T8H
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1.8 A CRYSTAL STRUCTURE OF AN UNCHARACTERIZED B. STEAROTHERMOPHILUS PROTEIN
分子名称: BETA-MERCAPTOETHANOL, YlmD protein sequence homologue, ZINC ION
著者Minasov, G, Shuvalova, L, Mondragon, A, Taneja, B, Moy, S.F, Collart, F.R, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
登録日2004-05-12
公開日2004-05-18
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献1.8 A CRYSTAL STRUCTURE OF AN UNCHARACTERIZED B. STEAROTHERMOPHILUS PROTEIN
To be Published
6IEY
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BU of 6iey by Molmil
Crystal structure of Chloramphenicol-Metabolizaing Enzyme EstDL136-Chloramphenicol complex
分子名称: CHLORAMPHENICOL, Esterase
著者Kim, S.H, Kang, P.A, Han, K.T, Lee, S.W, Rhee, S.K.
登録日2018-09-18
公開日2019-02-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Crystal structure of chloramphenicol-metabolizing enzyme EstDL136 from a metagenome.
PLoS ONE, 14, 2019
5CR3
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BU of 5cr3 by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS V104E/L125E at cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Skerritt, L.A, Bell-Upp, P.C, Schlessman, J.L, Garcia-Moreno E, B.
登録日2015-07-22
公開日2015-08-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Staphylococcal nuclease variant Delta+PHS V104E/L125E at cryogenic temperature
To be Published
1TFZ
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BU of 1tfz by Molmil
Structural basis for herbicidal inhibitor selectivity revealed by comparison of crystal structures of plant and mammalian 4-hydroxyphenylpyruvate dioxygenases
分子名称: (1-TERT-BUTYL-5-HYDROXY-1H-PYRAZOL-4-YL)[6-(METHYLSULFONYL)-4'-METHOXY-2-METHYL-1,1'-BIPHENYL-3-YL]METHANONE, 4-hydroxyphenylpyruvate dioxygenase, FE (III) ION
著者Yang, C, Pflugrath, J.W, Camper, D.L, Foster, M.L, Pernich, D.J, Walsh, T.A.
登録日2004-05-27
公開日2004-08-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for herbicidal inhibitor selectivity revealed by comparison of crystal structures of plant and Mammalian 4-hydroxyphenylpyruvate dioxygenases
Biochemistry, 43, 2004
3EPV
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BU of 3epv by Molmil
X-ray Structure of the Metal-sensor CnrX in both the Apo- and Copper-bound Forms
分子名称: COPPER (II) ION, Nickel and cobalt resistance protein cnrR
著者Pompidor, G, Maillard, A.P, Girard, E, Gambarelli, S, Kahn, R, Coves, J.
登録日2008-09-30
公開日2008-11-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.742 Å)
主引用文献X-ray structure of the metal-sensor CnrX in both the apo- and copper-bound forms.
Febs Lett., 2008
6PA4
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BU of 6pa4 by Molmil
E. coli L-asparaginase II double mutant (T89V,K162T) in complex with L-Asp at pH 7.0
分子名称: ASPARTIC ACID, GLYCEROL, L-asparaginase 2
著者Lubkowski, J, Wlodawer, A.
登録日2019-06-11
公開日2019-09-04
最終更新日2020-08-19
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase.
Protein Sci., 28, 2019
8I4F
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BU of 8i4f by Molmil
Omicron spike variant XBB with n3130v-Fc
分子名称: Spike glycoprotein, n3130v-Fc
著者Hao, A.H, Zhang, X, Chen, Z.G, Sun, L.
登録日2023-01-19
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献Defining a highly conserved cryptic epitope for antibody recognition of SARS-CoV-2 variants.
Signal Transduct Target Ther, 8, 2023
8I4G
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BU of 8i4g by Molmil
Omicron spike variant BQ.1.1 with n3130v-Fc
分子名称: Spike glycoprotein, n3130v-Fc
著者Hao, A.H, Zhang, X, Chen, Z.G, Sun, L.
登録日2023-01-19
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Defining a highly conserved cryptic epitope for antibody recognition of SARS-CoV-2 variants.
Signal Transduct Target Ther, 8, 2023
6IDR
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BU of 6idr by Molmil
Crystal structure of Vibrio cholerae MATE transporter VcmN in the bent form
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MATE family efflux transporter
著者Kusakizako, T, Claxton, D.P, Tanaka, Y, Maturana, A.D, Kuroda, T, Ishitani, R, Mchaourab, H.S, Nureki, O.
登録日2018-09-11
公開日2019-01-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Structural Basis of H+-Dependent Conformational Change in a Bacterial MATE Transporter.
Structure, 27, 2019
5D55
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BU of 5d55 by Molmil
Crystal structure of the E. coli Hda pilus minor tip subunit, HdaB
分子名称: CITRATE ANION, HdaB,HdaA (Adhesin), HUS-associated diffuse adherence, ...
著者Lee, W.-C, Garnett, J.A, Matthews, S.J.
登録日2015-08-10
公開日2016-08-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure and analysis of HdaB: The enteroaggregative Escherichia coli AAF/IV pilus tip protein.
Protein Sci., 25, 2016
8I4E
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BU of 8i4e by Molmil
Omicron spike variant XBB with Bn03
分子名称: Bn03, Spike glycoprotein
著者Hao, A.H, Zhang, X, Chen, Z.G, Sun, L.
登録日2023-01-19
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (3.98 Å)
主引用文献Defining a highly conserved cryptic epitope for antibody recognition of SARS-CoV-2 variants.
Signal Transduct Target Ther, 8, 2023
2IH4
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BU of 2ih4 by Molmil
Crystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing pyrrolo-dC at the target base partner position
分子名称: 5'-D(*GP*AP*CP*AP*(4PC)P*CP*GP*(6MA)P*AP*C)-3', 5'-D(*GP*TP*TP*CP*GP*AP*TP*GP*TP*C)-3', 5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE, ...
著者Lenz, T, Scheidig, A.J, Weinhold, E.
登録日2006-09-25
公開日2007-11-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Influence of the target base partner on the methylation rate of the adenine-specific DNA methyltransferase M.TaqI
To be Published
3EUW
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BU of 3euw by Molmil
Crystal Structure of a Myo-inositol dehydrogenase from Corynebacterium glutamicum ATCC 13032
分子名称: Myo-inositol dehydrogenase, SODIUM ION
著者Kumaran, D, Mahmood, A, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-10-11
公開日2008-10-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of a Myo-inositol dehydrogenase from Corynebacterium glutamicum ATCC 13032
To be Published
3EBQ
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BU of 3ebq by Molmil
Crystal structure of human PPPDE1
分子名称: MERCURY (II) ION, MOLECULE: PPPDE1 (PERMUTED PAPAIN FOLD PEPTIDASES OF DSRNA VIRUSES AND EUKARYOTES 1), UPF0326 protein FAM152B
著者Walker, J.R, Akutsu, M, Qiu, L, Li, Y, Slessarev, Y, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Botchkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2008-08-28
公開日2008-11-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of Human PPPDE1
To be Published
4REX
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BU of 4rex by Molmil
Crystal structure of the first WW domain of human YAP2 isoform
分子名称: SULFATE ION, Yorkie homolog
著者Camara-Artigas, A.
登録日2014-09-24
公開日2015-08-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the first WW domain of human YAP2 isoform.
J.Struct.Biol., 191, 2015
2IT7
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BU of 2it7 by Molmil
Solution structure of the squash trypsin inhibitor EETI-II
分子名称: Trypsin inhibitor 2
著者Chiche, L, Heitz, A, Le-Nguyen, D.
登録日2006-10-19
公開日2007-10-02
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Knottin cyclization: Structure and stability of cyclic and linear squash inhibitors do not differ significantly
To be Published
3EB1
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BU of 3eb1 by Molmil
Crystal structure PTP1B complex with small molecule inhibitor LZP-25
分子名称: 4-[3-(dibenzylamino)phenyl]-2,4-dioxobutanoic acid, Tyrosine-protein phosphatase non-receptor type 1
著者Liu, S, Zheng, L.-F, Wu, L, Yu, X, Xue, T, Gunawan, A.M, Long, Y.-Q, Zhang, Z.-Y.
登録日2008-08-26
公開日2009-07-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Targeting inactive enzyme conformation: aryl diketoacid derivatives as a new class of PTP1B inhibitors.
J.Am.Chem.Soc., 130, 2008
7ZOM
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BU of 7zom by Molmil
Crystal structure of N-terminal catalytic domain of human PLAAT3
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Phospholipase A and acyltransferase 3
著者von Castelmur, E, Perrakis, A.
登録日2022-04-26
公開日2023-04-26
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Crystal structure of N-terminal catalytic domain of human PLAAT3
To Be Published

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