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PDB: 89111 件

6F8O
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AKR1B1 at 3.45 MGy radiation dose.
分子名称: Aldose reductase, CITRIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Castellvi, A, Juanhuix, J.
登録日2017-12-13
公開日2019-03-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Efficacy of aldose reductase inhibitors is affected by oxidative stress induced under X-ray irradiation.
Sci Rep, 9, 2019
6F9P
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Crystal structure of the Fe(II)/alpha-ketoglutarate dependent dioxygenase KDO5 with Re(II)
分子名称: CHLORIDE ION, GLYCEROL, L-lysine 4-hydroxylase, ...
著者Isabet, T, Stura, E, Legrand, P, Zaparucha, A, Bastard, K.
登録日2017-12-15
公開日2018-11-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Studies based on two Lysine Dioxygenases with Distinct Regioselectivity Brings Insights Into Enzyme Specificity within the Clavaminate Synthase-Like Family.
Sci Rep, 8, 2018
7MYH
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Ubiquitin variant UbV.k.2 in complex with Ube2k
分子名称: GLYCEROL, Ubiquitin variant UbV.k.2, Ubiquitin-conjugating enzyme E2 K
著者Middleton, A.J, Day, C.L, Teyra, J, Sidhu, S.S.
登録日2021-05-21
公開日2021-08-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.394 Å)
主引用文献Identification of Ubiquitin Variants That Inhibit the E2 Ubiquitin Conjugating Enzyme, Ube2k.
Acs Chem.Biol., 16, 2021
6VGT
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BU of 6vgt by Molmil
Solution NMR structure of enterococcal cytolysin L (CylLL") produced by Enterococcus faecalis
分子名称: cytolysin L
著者Bobeica, S.C, van der Donk, W.A, Zhu, L, Tang, W.
登録日2020-01-08
公開日2020-07-08
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural determinants of macrocyclization in substrate-controlled lanthipeptide biosynthetic pathways.
Chem Sci, 11, 2020
4YO9
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HKU4 3CLpro unbound structure
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 3C-like proteinase, ACETATE ION, ...
著者St John, S.E, Mesecar, A.
登録日2015-03-11
公開日2015-08-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Targeting zoonotic viruses: Structure-based inhibition of the 3C-like protease from bat coronavirus HKU4-The likely reservoir host to the human coronavirus that causes Middle East Respiratory Syndrome (MERS).
Bioorg.Med.Chem., 23, 2015
8UUK
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Pendrin in apo
分子名称: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, CHOLESTEROL, Lauryl Maltose Neopentyl Glycol, ...
著者Wang, L, Hoang, A, Zhou, M.
登録日2023-11-01
公開日2024-02-07
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Mechanism of anion exchange and small-molecule inhibition of pendrin.
Nat Commun, 15, 2024
6EXA
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BU of 6exa by Molmil
Crystal structure of DotM cytoplasmic domain (residues 153-380), double mutant R196E/R197E
分子名称: GLYCEROL, IcmP (DotM), SULFATE ION
著者Meir, A, Waksman, G.
登録日2017-11-07
公開日2018-02-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Legionella DotM structure reveals a role in effector recruiting to the Type 4B secretion system.
Nat Commun, 9, 2018
8SQW
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particulate methane monooxygenase crosslinked with 2,2,2-trifluoroethanol bound
分子名称: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Ammonia monooxygenase/methane monooxygenase, ...
著者Tucci, F.J, Rosenzweig, A.C.
登録日2023-05-04
公開日2023-11-15
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (2.16 Å)
主引用文献Product analog binding identifies the copper active site of particulate methane monooxygenase.
Nat Catal, 6, 2023
8SR1
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particulate methane monooxygenase crosslinked with 4,4,4-trifluorobutanol bound
分子名称: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, 4,4,4-trifluorobutan-1-ol, ...
著者Tucci, F.J, Rosenzweig, A.C.
登録日2023-05-05
公開日2023-11-15
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (2.18 Å)
主引用文献Product analog binding identifies the copper active site of particulate methane monooxygenase.
Nat Catal, 6, 2023
8GJ3
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BU of 8gj3 by Molmil
E. coli clamp loader on primed template DNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA polymerase III subunit delta, DNA polymerase III subunit delta', ...
著者Oakley, A.J, Xu, Z.-Q, Dixon, N.E.
登録日2023-03-14
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural characterisation of the complete cycle of sliding clamp loading in E. coli
To Be Published
2WIH
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BU of 2wih by Molmil
STRUCTURE OF CDK2-CYCLIN A WITH PHA-848125
分子名称: CELL DIVISION PROTEIN KINASE 2, CYCLIN-A2, N,1,4,4-TETRAMETHYL-8-{[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]AMINO}-4,5-DIHYDRO-1H-PYRAZOLO[4,3-H]QUINAZOLINE-3-CARBOXAMIDE, ...
著者Brasca, M.G, Amboldi, N, Ballinari, D, Cameron, A.D, Casale, E, Cervi, G, Colombo, M, Colotta, F, Croci, V, Dalessio, R, Fiorentini, F, Isacchi, A, Mercurio, C, Moretti, W, Panzeri, A, Pastori, W, Pevarello, P, Quartieri, F, Roletto, F, Traquandi, G, Vianello, P, Vulpetti, A, Ciomei, M.
登録日2009-05-13
公開日2009-07-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Identification of N,1,4,4-Tetramethyl-8-{[4-(4-Methylpiperazin-1-Yl)Phenyl]Amino}-4,5-Dihydro-1H-Pyrazolo[4,3-H]Quinazoline-3-Carboxamide (Pha-848125), a Potent, Orally Available Cyclin Dependent Kinase Inhibitor.
J.Med.Chem., 52, 2009
8GJ1
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E. coli clamp loader with open clamp on primed template DNA (form 2)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Beta sliding clamp, DNA polymerase III subunit delta, ...
著者Oakley, A.J, Xu, Z.-Q, Dixon, N.E.
登録日2023-03-14
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural characterisation of the complete cycle of sliding clamp loading in E. coli
To Be Published
6QWP
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BU of 6qwp by Molmil
Crystal structure of T7 bacteriophage portal protein, 13mer, closed valve
分子名称: Portal protein
著者Fabrega-Ferrer, M, Cuervo, A, Machon, C, Fernandez, F.J, Perez-Luque, R, Pous, J, Vega, M.C, Carrascosa, J.L, Coll, M.
登録日2019-03-06
公開日2019-09-04
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structures of T7 bacteriophage portal and tail suggest a viral DNA retention and ejection mechanism.
Nat Commun, 10, 2019
6B37
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Crystal Structure of Purine Nucleoside Phosphorylase Isoform 2 from Schistosoma mansoni in complex with 1,3-benzothiazol-2-ol
分子名称: 1,3-benzothiazol-2-ol, DIMETHYL SULFOXIDE, Purine nucleoside phosphorylase
著者Faheem, M, Neto, J.B, Collins, P, Pearce, N.M, Valadares, N.F, Bird, L, Pereira, H.M, Delft, F.V, Barbosa, J.A.R.G.
登録日2017-09-21
公開日2018-09-26
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of Purine Nucleoside Phosphorylase Isoform 2 from Schistosoma mansoni in complex with 1,3-benzothiazol-2-ol
To Be Published
8GJ2
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BU of 8gj2 by Molmil
E. coli clamp loader with closed clamp on primed template DNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, Beta sliding clamp, DNA polymerase III subunit delta, ...
著者Oakley, A.J, Xu, Z.-Q, Dixon, N.E.
登録日2023-03-14
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural characterisation of the complete cycle of sliding clamp loading in E. coli
To Be Published
5JFD
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BU of 5jfd by Molmil
Thrombin in complex with (S)-N-(2-(aminomethyl)-5-chlorobenzyl)-1-((benzylsulfonyl)-D-arginyl)pyrrolidine-2-carboxamide
分子名称: (2S)-N-[[2-(aminomethyl)-5-chloro-phenyl]methyl]-1-[(2R)-5-carbamimidamido-2-(phenylmethylsulfonylamino)pentanoyl]pyrrolidine-2-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
著者Sandner, A, Heine, A, Klebe, G.
登録日2016-04-19
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Strategies for Late-Stage Optimization: Profiling Thermodynamics by Preorganization and Salt Bridge Shielding.
J.Med.Chem., 62, 2019
6B3L
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BU of 6b3l by Molmil
Crystal Structure of Purine Nucleoside Phosphorylase Isoform 2 from Schistosoma mansoni in complex with 2,3-dihydro-1H-inden-2-amine
分子名称: DIMETHYL SULFOXIDE, INDAN-2-AMINE, Purine nucleoside phosphorylase
著者Faheem, M, Neto, J.B, Collins, P, Pearce, N.M, Valadares, N.F, Bird, L, Pereira, H.M, Delft, F.V, Barbosa, J.A.R.G.
登録日2017-09-22
公開日2018-09-26
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Crystal Structure of Purine Nucleoside Phosphorylase Isoform 2 from Schistosoma mansoni in complex with 2,3-dihydro-1H-inden-2-amine
To Be Published
4YQY
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BU of 4yqy by Molmil
Crystal Structure of a putative Dehydrogenase from Sulfitobacter sp. (COG1028) (TARGET EFI-513936) in its APO form
分子名称: MAGNESIUM ION, Putative Dehydrogenase
著者Yadava, U, Vetting, M.W, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Koss, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2015-03-13
公開日2015-03-25
実験手法X-RAY DIFFRACTION (1.381 Å)
主引用文献Crystal Structure of a putative Dehydrogenase from Sulfitobacter sp. (COG1028, TARGET EFI-513936) in its APO form
To be published
8GJ0
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BU of 8gj0 by Molmil
E. coli clamp loader with open clamp on primed template DNA (form 1)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Beta sliding clamp, DNA polymerase III subunit delta, ...
著者Oakley, A.J, Xu, Z.-Q, Dixon, N.E.
登録日2023-03-14
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural characterisation of the complete cycle of sliding clamp loading in E. coli
To Be Published
5FT0
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BU of 5ft0 by Molmil
Crystal structure of gp37(Dip) from bacteriophage phiKZ
分子名称: ARGININE, GP37, POTASSIUM ION
著者Van den Bossche, A, Hardwick, S.W, Ceyssens, P.J, Hendrix, H, Voet, M, Dendooven, T, Bandyra, K.J, De Maeyer, M, Aertsen, A, Noben, J.P, Luisi, B.F, Lavigne, R.
登録日2016-01-08
公開日2016-08-03
最終更新日2017-03-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural elucidation of a novel mechanism for the bacteriophage-based inhibition of the RNA degradosome.
Elife, 5, 2016
6ETK
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BU of 6etk by Molmil
Atomic resolution structure of RNase A (data collection 1)
分子名称: ISOPROPYL ALCOHOL, Ribonuclease pancreatic
著者Caterino, M, Vergara, A, Merlino, A.
登録日2017-10-27
公開日2018-02-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (0.85 Å)
主引用文献Raman-markers of X-ray radiation damage of proteins.
Int. J. Biol. Macromol., 111, 2018
6B5V
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BU of 6b5v by Molmil
Structure of TRPV5 in complex with econazole
分子名称: 1-[(2R)-2-[(4-chlorobenzyl)oxy]-2-(2,4-dichlorophenyl)ethyl]-1H-imidazole, CALCIUM ION, Transient receptor potential cation channel subfamily V member 5
著者Hughes, T.E.T, Lodowski, D.T, Huynh, K.W, Yazici, A, del Rosario, J, Kapoor, A, Basak, S, Samanta, A, Chakrapani, S, Zhou, Z.H, Filizola, M, Rohacs, T, Han, S, Moiseenkova-Bell, V.Y.
登録日2017-09-29
公開日2017-12-27
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structural basis of TRPV5 channel inhibition by econazole revealed by cryo-EM.
Nat. Struct. Mol. Biol., 25, 2018
5JGU
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BU of 5jgu by Molmil
Spin-Labeled T4 Lysozyme Construct R119V1
分子名称: CHLORIDE ION, Endolysin, PHOSPHATE ION, ...
著者Balo, A.R, Feyrer, H, Ernst, O.P.
登録日2016-04-20
公開日2017-02-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.468 Å)
主引用文献Toward Precise Interpretation of DEER-Based Distance Distributions: Insights from Structural Characterization of V1 Spin-Labeled Side Chains.
Biochemistry, 55, 2016
7X55
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A CBg-ParM filament with GTP and a short incubation time
分子名称: GUANOSINE-5'-TRIPHOSPHATE, ParM/StbA family protein
著者Koh, A, Ali, S, Robinson, R, Narita, A.
登録日2022-03-04
公開日2023-03-08
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (8.6 Å)
主引用文献A new actin-like filament from Clostridium botulinum exhibits a new system of filament turn over
To Be Published
6F6Z
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BU of 6f6z by Molmil
Mouse Thymidylate Synthase Cocrystallized with N(4)OHdCMP and Soaked in Methylenetetrahydrofolate
分子名称: (2~{S})-2-[[4-[[(6~{R})-2-azanyl-4-oxidanylidene-5,6,7,8-tetrahydro-1~{H}-pteridin-6-yl]methyl-methyl-amino]phenyl]carbonylamino]pentanedioic acid, 2'-deoxy-N-hydroxycytidine 5'-(dihydrogen phosphate), Thymidylate synthase
著者Wilk, P, Jarmula, A, Maj, P, Rode, W.
登録日2017-12-06
公開日2019-01-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.127 Å)
主引用文献Molecular Mechanism of Thymidylate Synthase Inhibition by N4-Hydroxy-dCMP in View of Spectrophotometric and Crystallographic Studies
Int J Mol Sci, 22, 2021

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件を2024-09-11に公開中

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