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PDB: 89035 results

7NNH
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BU of 7nnh by Molmil
Cryo-EM structure of VAR2CSA FCR3 domain DBL5/6
Descriptor: Erythrocyte membrane protein 1
Authors:Wang, K.T, Dagil, R, Salanti, A, Gourdon, P.E.
Deposit date:2021-02-24
Release date:2021-06-02
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM reveals the architecture of placental malaria VAR2CSA and provides molecular insight into chondroitin sulfate binding.
Nat Commun, 12, 2021
7ON6
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BU of 7on6 by Molmil
Crystal structure of the computationally designed SAKe6AE protein
Descriptor: SAKe6AE, SULFATE ION
Authors:Wouters, S.M.L, Noguchi, H, Clarke, D.E, Voet, A.R.D, De Feyter, S.
Deposit date:2021-05-25
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:SAKe: Computationally Designed Modular Protein Building Blocks for Macromolecular Assemblies
To be published
5LCZ
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BU of 5lcz by Molmil
Chimeric GST
Descriptor: GLUTATHIONE, Glutathione S-transferase A1,Glutathione S-transferase alpha-2,Glutathione S-transferase A1,Glutathione S-transferase alpha-2,Glutathione S-transferase A1
Authors:Axarli, A, Muleta, A.W, Chronopoulou, E.G, Papageorgiou, A.C, Labrou, N.E.
Deposit date:2016-06-23
Release date:2016-09-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.325 Å)
Cite:Directed evolution of glutathione transferases towards a selective glutathione-binding site and improved oxidative stability.
Biochim. Biophys. Acta, 1861, 2017
6XZE
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BU of 6xze by Molmil
crystal structure of human carbonic anhydrase I in complex with 4-(3-(2-((2-fluorobenzyl)amino)ethyl)ureido) benzenesulfonamide
Descriptor: 1-[2-[(2-fluorophenyl)methylamino]ethyl]-3-(4-sulfamoylphenyl)urea, Carbonic anhydrase 1, ZINC ION
Authors:Zanotti, G, Majid, A, Bozdag, M, Angeli, A, Carta, F, Berto, P, Supuran, C.
Deposit date:2020-02-04
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Benzylaminoethyureido-Tailed Benzenesulfonamides: Design, Synthesis, Kinetic and X-ray Investigations on Human Carbonic Anhydrases.
Int J Mol Sci, 21, 2020
6ZNU
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BU of 6znu by Molmil
MaeB PTA domain E544R mutant
Descriptor: ACETYL COENZYME *A, CHLORIDE ION, Malate dehydrogenase
Authors:Lovering, A.L, Harding, C.J.
Deposit date:2020-07-06
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:A rotary mechanism for allostery in bacterial hybrid malic enzymes.
Nat Commun, 12, 2021
4WMZ
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BU of 4wmz by Molmil
S. cerevisiae CYP51 complexed with fluconazole in the active site
Descriptor: 2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1,2,4-TRIAZOL-1-YL)PROPAN-2-OL, Lanosterol 14-alpha demethylase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sagatova, A, Keniya, M.V, Wilson, R, Wilbanks, S.M, Monk, B.C, Tyndall, J.D.A.
Deposit date:2014-10-09
Release date:2015-07-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Insights into Binding of the Antifungal Drug Fluconazole to Saccharomyces cerevisiae Lanosterol 14 alpha-Demethylase.
Antimicrob.Agents Chemother., 59, 2015
5LIE
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BU of 5lie by Molmil
Crystal structure of Mycobacterium tuberculosis CYP126A1 in complex with imidazole
Descriptor: IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, Putative cytochrome P450 126
Authors:Levy, C, Munro, A.W, Leys, D.
Deposit date:2016-07-14
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Structural Characterization and Ligand/Inhibitor Identification Provide Functional Insights into the Mycobacterium tuberculosis Cytochrome P450 CYP126A1.
J. Biol. Chem., 292, 2017
7S4K
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BU of 7s4k by Molmil
CryoEM structure of Methylococcus capsulatus (Bath) pMMO in a native lipid nanodisc at 2.34 Angstrom resolution
Descriptor: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Ammonia monooxygenase/methane monooxygenase, ...
Authors:Koo, C.W, Rosenzweig, A.C.
Deposit date:2021-09-09
Release date:2022-03-30
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.36 Å)
Cite:Recovery of particulate methane monooxygenase structure and activity in a lipid bilayer.
Science, 375, 2022
5LDA
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BU of 5lda by Molmil
Structure of deubiquitinating enzyme homolog (Pyrococcus furiosus JAMM1) in complex with ubiquitin-like SAMP2.
Descriptor: GLYCEROL, JAMM1, SAMP2, ...
Authors:Cao, S, Engilberge, S, Girard, E, Gabel, F, Franzetti, B, Maupin-Furlow, J.A.
Deposit date:2016-06-24
Release date:2017-06-21
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Insight into Ubiquitin-Like Protein Recognition and Oligomeric States of JAMM/MPN(+) Proteases.
Structure, 25, 2017
8EEQ
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BU of 8eeq by Molmil
CryoEM structures of bAE1 captured in multiple states.
Descriptor: Anion exchange protein
Authors:Zhekova, H.R, Wang, W.G, Jiang, J.S, Tsirulnikov, K, Muhammad-Khan, G.H, Azimov, R, Abuladze, N, Kao, L, Newman, D, Noskov, S.Y, Tieleman, P, Zhou, Z.H, Pushkin, A, Kurtz, I.
Deposit date:2022-09-07
Release date:2023-01-25
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:CryoEM structures of anion exchanger 1 capture multiple states of inward- and outward-facing conformations.
Commun Biol, 5, 2022
4WQ9
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BU of 4wq9 by Molmil
Thiosulfate dehydrogenase (TsdA) from Allochromatium vinosum - dithionite soak
Descriptor: 1,2-ETHANEDIOL, HEME C, HYDROSULFURIC ACID, ...
Authors:Brito, J.A, Denkmann, K, Pereira, I.A.C, Dahl, C, Archer, M.
Deposit date:2014-10-21
Release date:2015-02-18
Last modified:2021-09-08
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Thiosulfate Dehydrogenase (TsdA) from Allochromatium vinosum: STRUCTURAL AND FUNCTIONAL INSIGHTS INTO THIOSULFATE OXIDATION.
J.Biol.Chem., 290, 2015
5LGT
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BU of 5lgt by Molmil
Thieno[3,2-b]pyrrole-5-carboxamides as Novel Reversible Inhibitors of Histone Lysine Demethylase KDM1A/LSD1: Compound 15
Descriptor: 4-methyl-~{N}-[2-[[4-(1-methylpiperidin-4-yl)oxyphenoxy]methyl]phenyl]thieno[3,2-b]pyrrole-5-carboxamide, FLAVIN-ADENINE DINUCLEOTIDE, Lysine-specific histone demethylase 1A, ...
Authors:Mattevi, A, Ciossani, G.
Deposit date:2016-07-08
Release date:2017-02-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Thieno[3,2-b]pyrrole-5-carboxamides as New Reversible Inhibitors of Histone Lysine Demethylase KDM1A/LSD1. Part 2: Structure-Based Drug Design and Structure-Activity Relationship.
J. Med. Chem., 60, 2017
6ZN4
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BU of 6zn4 by Molmil
MaeB malic enzyme domain apoprotein
Descriptor: MAGNESIUM ION, NADP-dependent malate dehydrogenase,Malate dehydrogenase
Authors:Lovering, A.L, Harding, C.J.
Deposit date:2020-07-06
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.679 Å)
Cite:A rotary mechanism for allostery in bacterial hybrid malic enzymes.
Nat Commun, 12, 2021
8BLO
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BU of 8blo by Molmil
Human Urea Transporter UT-A (N-Terminal Domain Model)
Descriptor: Lauryl Maltose Neopentyl Glycol, Urea transporter 2, di-heneicosanoyl phosphatidyl choline
Authors:Chi, G, Pike, A.C.W, Maclean, E.M, Mukhopadhyay, S.M.M, Bohstedt, T, Scacioc, A, Wang, D, McKinley, G, Fernandez-Cid, A, Arrowsmith, C.H, Bountra, C, Edwards, A, Burgess-Brown, N.A, van Putte, W, Duerr, K.
Deposit date:2022-11-10
Release date:2023-10-04
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural characterization of human urea transporters UT-A and UT-B and their inhibition.
Sci Adv, 9, 2023
4WS4
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BU of 4ws4 by Molmil
Crystal structure of Mycobacterium tuberculosis uracil-DNA glycosylase in complex with 5-nitrouracil, Form I
Descriptor: 5-nitrouracil, CHLORIDE ION, CITRIC ACID, ...
Authors:Arif, S.M, Geethanandan, K, Mishra, P, Surolia, A, Varshney, U, Vijayan, M.
Deposit date:2014-10-25
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Structural plasticity in Mycobacterium tuberculosis uracil-DNA glycosylase (MtUng) and its functional implications.
Acta Crystallogr.,Sect.D, 71, 2015
7S4J
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BU of 7s4j by Molmil
CryoEM structure of Methylococcus capsulatus (Bath) pMMO in a native lipid nanodisc at 2.16 Angstrom resolution
Descriptor: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Ammonia monooxygenase/methane monooxygenase, ...
Authors:Koo, C.W, Rosenzweig, A.C.
Deposit date:2021-09-09
Release date:2022-03-30
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.16 Å)
Cite:Recovery of particulate methane monooxygenase structure and activity in a lipid bilayer.
Science, 375, 2022
6LKT
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BU of 6lkt by Molmil
Crystal structure of the Fab fragment of murine monoclonal antibody KH-1 against Human herpesvirus 6B
Descriptor: antibody Fab Fragment L-chain, antibody Fab fragment H chain
Authors:Nishimura, M, Novita, B.D, Kato, T, Tjan, L.H, Wang, B, Wakata, A, Poetranto, A.L, Kawabata, A, Tang, H, Aoshi, T, Mori, Y.
Deposit date:2019-12-20
Release date:2020-06-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the interaction of human herpesvirus 6B tetrameric glycoprotein complex with the cellular receptor, human CD134.
Plos Pathog., 16, 2020
6E8T
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BU of 6e8t by Molmil
Structure of the Mango-III (A10U) aptamer bound to TO1-Biotin
Descriptor: 1-methyl-4-{[3-(2-oxopropyl)-1,3-benzothiazol-3-ium-2-yl]methyl}quinolin-1-ium, POTASSIUM ION, RNA (35-MER), ...
Authors:Trachman, R.J, Ferre-D'Amare, A.R.
Deposit date:2018-07-31
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure and functional reselection of the Mango-III fluorogenic RNA aptamer.
Nat. Chem. Biol., 15, 2019
6ZNK
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BU of 6znk by Molmil
MaeB PTA domain N718D mutant
Descriptor: Malate dehydrogenase, SULFATE ION
Authors:Lovering, A.L, Harding, C.J.
Deposit date:2020-07-06
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.039 Å)
Cite:A rotary mechanism for allostery in bacterial hybrid malic enzymes.
Nat Commun, 12, 2021
7S4H
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BU of 7s4h by Molmil
CryoEM structure of Methylococcus capsulatus (Bath) pMMO in a native lipid nanodisc at 2.14 Angstrom resolution
Descriptor: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Ammonia monooxygenase/methane monooxygenase, ...
Authors:Koo, C.W, Rosenzweig, A.C.
Deposit date:2021-09-08
Release date:2022-03-30
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.14 Å)
Cite:Recovery of particulate methane monooxygenase structure and activity in a lipid bilayer.
Science, 375, 2022
8RTC
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BU of 8rtc by Molmil
Rap from bacteriophage Phi3T in presence of pheromone RGHTS
Descriptor: Glycerol ethoxylate, Pheromone RGHTS, Rap3T
Authors:Felipe-Ruiz, A, Zamora-Caballero, S, Marina, A.
Deposit date:2024-01-25
Release date:2024-07-24
Last modified:2024-08-28
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Extracellular proteolysis of tandemly duplicated pheromone propeptides affords additional complexity to bacterial quorum sensing.
Plos Biol., 22, 2024
4WS0
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BU of 4ws0 by Molmil
Crystal structure of Mycobacterium tuberculosis uracil-DNA glycosylase in complex with 5-fluorouracil (A), Form II
Descriptor: 1,2-ETHANEDIOL, 5-FLUOROURACIL, CHLORIDE ION, ...
Authors:Arif, S.M, Geethanandan, K, Mishra, P, Surolia, A, Varshney, U, Vijayan, M.
Deposit date:2014-10-25
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.974 Å)
Cite:Structural plasticity in Mycobacterium tuberculosis uracil-DNA glycosylase (MtUng) and its functional implications.
Acta Crystallogr.,Sect.D, 71, 2015
7S4L
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BU of 7s4l by Molmil
CryoEM structure of Methylotuvimicrobium alcaliphilum 20Z pMMO in a POPC nanodisc at 2.46 Angstrom resolution
Descriptor: (S)-2,3-bis(hexanoyloxy)propyl(2-(trimethylammonio)ethyl)phosphate, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, COPPER (II) ION, ...
Authors:Koo, C.W, Rosenzweig, A.C.
Deposit date:2021-09-09
Release date:2022-03-30
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.46 Å)
Cite:Recovery of particulate methane monooxygenase structure and activity in a lipid bilayer.
Science, 375, 2022
8OOY
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BU of 8ooy by Molmil
Pol I bound to extended and displaced DNA section - open conformation
Descriptor: DNA polymerase I, Displacing Primer, Extending Primer, ...
Authors:Botto, M, Borsellini, A, Lamers, M.H.
Deposit date:2023-04-06
Release date:2023-08-09
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (4 Å)
Cite:A four-point molecular handover during Okazaki maturation.
Nat.Struct.Mol.Biol., 30, 2023
6RXG
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BU of 6rxg by Molmil
Crystal Structure of Bifidobacterium longum Multiple Inositol Polyphosphate Phosphatase Complex with Phosphate
Descriptor: Histidine acid phosphatase, PHOSPHATE ION, ZINC ION
Authors:Zietek, M.A.Z, Brearley, C.A, Hemmings, A.M.
Deposit date:2019-06-07
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Snapshots during the catalytic cycle of a histidine acid phytase reveal an induced-fit structural mechanism.
J.Biol.Chem., 295, 2020

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