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PDB: 89035 results

4UJ7
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BU of 4uj7 by Molmil
Structure of the S-layer protein SbsC, domains 5-6
Descriptor: CALCIUM ION, SURFACE LAYER PROTEIN
Authors:Dordic, A, Pavkov-Keller, T, Eder, M, Egelseer, E.M, Davis, K, Mills, D, Sleytr, U.B, Kuehlbrandt, W, Vonck, J, Keller, W.
Deposit date:2015-04-08
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structure of the S-Layer Protein Sbsc, Domains 5-6
To be Published
9C4D
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BU of 9c4d by Molmil
The structure of 4 MntR homodimers bound to the promoter sequence of mnep
Descriptor: DNA (77-MER), HTH-type transcriptional regulator MntR, MANGANESE (II) ION
Authors:Shi, H, Fu, Y, Glasfeld, A, Ahuja, S.
Deposit date:2024-06-04
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (4.17 Å)
Cite:The structure of 4 MntR homodimers bound to the promoter sequence of mnep.
To Be Published
8XZR
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BU of 8xzr by Molmil
Crystal structure of folE riboswitch with 8-NH2 Guanine
Descriptor: 8-AMINOGUANINE, MAGNESIUM ION, RNA (53-MER), ...
Authors:Li, C.Y, Ren, A.M.
Deposit date:2024-01-21
Release date:2024-07-24
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure-based characterization and compound identification of the wild-type THF class-II riboswitch.
Nucleic Acids Res., 52, 2024
8XZW
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BU of 8xzw by Molmil
Crystal structure of THF-II riboswitch with THF and soaked with Ir
Descriptor: (6S)-5,6,7,8-TETRAHYDROFOLATE, MAGNESIUM ION, RNA (53-MER), ...
Authors:Li, C.Y, Ren, A.M.
Deposit date:2024-01-21
Release date:2024-07-24
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structure-based characterization and compound identification of the wild-type THF class-II riboswitch.
Nucleic Acids Res., 52, 2024
8XZL
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BU of 8xzl by Molmil
Crystal structure of folE riboswitch with DHF
Descriptor: DIHYDROFOLIC ACID, MAGNESIUM ION, RNA (53-MER), ...
Authors:Li, C.Y, Ren, A.M.
Deposit date:2024-01-21
Release date:2024-07-24
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structure-based characterization and compound identification of the wild-type THF class-II riboswitch.
Nucleic Acids Res., 52, 2024
8XZE
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BU of 8xze by Molmil
Crystal structure of THF-II riboswitch with THF and soaked with Ir
Descriptor: (6S)-5,6,7,8-TETRAHYDROFOLATE, IRIDIUM ION, MAGNESIUM ION, ...
Authors:Li, C.Y, Ren, A.M.
Deposit date:2024-01-21
Release date:2024-07-24
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structure-based characterization and compound identification of the wild-type THF class-II riboswitch.
Nucleic Acids Res., 52, 2024
8XZK
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BU of 8xzk by Molmil
Crystal structure of folE riboswitch
Descriptor: RNA (53-MER)
Authors:Li, C.Y, Ren, A.M.
Deposit date:2024-01-21
Release date:2024-07-24
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structure-based characterization and compound identification of the wild-type THF class-II riboswitch.
Nucleic Acids Res., 52, 2024
8XZM
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BU of 8xzm by Molmil
Crystal structure of folE riboswitch with DHN
Descriptor: 2-AMINO-7,8-DIHYDRO-6-(1,2,3-TRIHYDROXYPROPYL)-4(1H)-PTERIDINONE, MAGNESIUM ION, RNA (53-MER), ...
Authors:Li, C.Y, Ren, A.M.
Deposit date:2024-01-21
Release date:2024-07-24
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure-based characterization and compound identification of the wild-type THF class-II riboswitch.
Nucleic Acids Res., 52, 2024
8XZO
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BU of 8xzo by Molmil
Crystal structure of folE riboswitch with Guanine
Descriptor: GUANINE, MAGNESIUM ION, RNA (53-MER), ...
Authors:Li, C.Y, Ren, A.M.
Deposit date:2024-01-21
Release date:2024-07-24
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structure-based characterization and compound identification of the wild-type THF class-II riboswitch.
Nucleic Acids Res., 52, 2024
8XZQ
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BU of 8xzq by Molmil
Crystal structure of folE riboswitch with 8-N Guanine
Descriptor: 5-AMINO-1H-[1,2,3]TRIAZOLO[4,5-D]PYRIMIDIN-7-OL, MAGNESIUM ION, RNA (53-MER), ...
Authors:Li, C.Y, Ren, A.M.
Deposit date:2024-01-21
Release date:2024-07-24
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure-based characterization and compound identification of the wild-type THF class-II riboswitch.
Nucleic Acids Res., 52, 2024
4TWL
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BU of 4twl by Molmil
Crystal structure of dioscorin complexed with ascorbate
Descriptor: ASCORBIC ACID, Dioscorin 5, SULFATE ION
Authors:Xue, Y.L, Miyakawa, T, Nakamura, A, Tanokura, M.
Deposit date:2014-07-01
Release date:2015-04-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Yam Tuber Storage Protein Reduces Plant Oxidants Using the Coupled Reactions as Carbonic Anhydrase and Dehydroascorbate Reductase
Mol Plant, 8, 2015
8XZP
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BU of 8xzp by Molmil
Crystal structure of folE riboswitch with 8-CH3 Guanine
Descriptor: 2-azanyl-8-methyl-1,9-dihydropurin-6-one, MAGNESIUM ION, RNA (53-MER), ...
Authors:Li, C.Y, Ren, A.M.
Deposit date:2024-01-21
Release date:2024-07-24
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structure-based characterization and compound identification of the wild-type THF class-II riboswitch.
Nucleic Acids Res., 52, 2024
9B00
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BU of 9b00 by Molmil
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with berberine analog of chloramphenicol CAM-BER, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.80A resolution
Descriptor: 13-(2-{[(1R,2R)-1,3-dihydroxy-1-(4-nitrophenyl)propan-2-yl]amino}-2-oxoethyl)-9,10-dimethoxy-5,6-dihydro-2H-[1,3]dioxolo[4,5-g]isoquinolino[3,2-a]isoquinolin-7-ium, 16S Ribosomal RNA, 23S Ribosomal RNA, ...
Authors:Batool, Z, Pavlova, J.A, Paranjpe, M.N, Tereshchenkov, A.G, Lukianov, D.A, Osterman, I.A, Bogdanov, A.A, Sumbatyan, N.V, Polikanov, Y.S.
Deposit date:2024-03-11
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Berberine analog of chloramphenicol exhibits a distinct mode of action and unveils ribosome plasticity.
Structure, 2024
8XZN
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BU of 8xzn by Molmil
Crystal structure of folE riboswitch with BH4
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, MAGNESIUM ION, RNA (53-MER), ...
Authors:Li, C.Y, Ren, A.M.
Deposit date:2024-01-21
Release date:2024-07-24
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structure-based characterization and compound identification of the wild-type THF class-II riboswitch.
Nucleic Acids Res., 52, 2024
4TYI
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BU of 4tyi by Molmil
Structural analysis of the human Fibroblast Growth Factor Receptor 4
Descriptor: 4-amino-5-fluoro-3-[5-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]quinolin-2(1H)-one, Fibroblast growth factor receptor 4
Authors:Lesca, E, Lammens, A, Huber, R, Augustin, M.
Deposit date:2014-07-08
Release date:2014-09-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural analysis of the human fibroblast growth factor receptor 4 kinase.
J.Mol.Biol., 426, 2014
7RIK
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BU of 7rik by Molmil
Magic-Angle-Spinning NMR Structure of Kinesin-1 Motor Domain Assembled with Microtubules
Descriptor: Kinesin-1 heavy chain
Authors:Zhang, C, Guo, C, Russell, R.W, Quinn, C.M, Li, M, Williams, J.C, Gronenborn, A.M, Polenova, T.
Deposit date:2021-07-20
Release date:2022-11-23
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Magic-angle-spinning NMR structure of the kinesin-1 motor domain assembled with microtubules reveals the elusive neck linker orientation
Nat Commun, 13, 2022
4V2A
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BU of 4v2a by Molmil
human Unc5A ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, NETRIN RECEPTOR UNC5A
Authors:Seiradake, E, del Toro, D, Nagel, D, Cop, F, Haertl, R, Ruff, T, Seyit-Bremer, G, Harlos, K, Border, E.C, Acker-Palmer, A, Jones, E.Y, Klein, R.
Deposit date:2014-10-08
Release date:2014-11-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Flrt Structure: Balancing Repulsion and Cell Adhesion in Cortical and Vascular Development
Neuron, 84, 2014
9BDN
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BU of 9bdn by Molmil
80S ribosome with angiogenin and tRNAAla
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Loveland, A.B, Korostelev, A.A.
Deposit date:2024-04-12
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural mechanism of angiogenin activation by the ribosome.
Nature, 630, 2024
9F1D
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BU of 9f1d by Molmil
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
Authors:Yudin, D, Scaiola, A, Ban, N.
Deposit date:2024-04-18
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:NAC guides a ribosomal multienzyme complex for nascent protein processing.
Nature, 2024
9AX6
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BU of 9ax6 by Molmil
Tricomplex of RMC-6236, KRAS G12D, and CypA
Descriptor: (1R,2S)-N-[(1P,7S,9S,13R,20M)-21-ethyl-20-{2-[(1R)-1-methoxyethyl]-5-(4-methylpiperazin-1-yl)pyridin-3-yl}-17,17-dimethyl-8,14-dioxo-15-oxa-4-thia-9,21,27,28-tetraazapentacyclo[17.5.2.1~2,5~.1~9,13~.0~22,26~]octacosa-1(24),2,5(28),19,22,25-hexaen-7-yl]-2-methylcyclopropane-1-carboxamide, GTPase KRas, MAGNESIUM ION, ...
Authors:Tomlinson, A.C.A, Saldajeno-Concar, M, Knox, J.E, Yano, J.K.
Deposit date:2024-03-05
Release date:2024-04-17
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Translational and Therapeutic Evaluation of RAS-GTP Inhibition by RMC-6236 in RAS-Driven Cancers.
Cancer Discov, 14, 2024
9CPD
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BU of 9cpd by Molmil
Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1
Descriptor: 4-[(3-methoxyphenyl)amino]-2-methylquinoline-6-carboximidamide, RNA (5'-R(*GP*AP*CP*AP*GP*CP*UP*GP*CP*UP*GP*UP*C)-3')
Authors:Chen, J.L, Taghavi, A, Disney, M.D, Fountain, M.A, Childs-Disney, J.L.
Deposit date:2024-07-18
Release date:2024-08-07
Last modified:2024-08-14
Method:SOLUTION NMR
Cite:NMR structures of small molecules bound to a model of a CUG RNA repeat expansion.
Bioorg.Med.Chem.Lett., 111, 2024
9BDP
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BU of 9bdp by Molmil
80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Loveland, A.B, Korostelev, A.A.
Deposit date:2024-04-12
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural mechanism of angiogenin activation by the ribosome.
Nature, 630, 2024
9RSA
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BU of 9rsa by Molmil
CRYSTAL STRUCTURE OF TWO COVALENT NUCLEOSIDE DERIVATIVES OF RIBONUCLEASE A
Descriptor: 3'-DEOXY-3'-ACETAMIDO-URIDINE, RIBONUCLEASE A
Authors:Nachman, J, Wlodawer, A.
Deposit date:1989-08-28
Release date:1991-04-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of two covalent nucleoside derivatives of ribonuclease A.
Biochemistry, 29, 1990
9C4C
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BU of 9c4c by Molmil
The structure of two MntR dimers bound to the native mnep promoter sequence
Descriptor: DNA (38-MER), DNA (39-MER), HTH-type transcriptional regulator MntR, ...
Authors:Shi, H, Fu, Y, Glasfeld, A, Ahuja, S.
Deposit date:2024-06-04
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:The structure of two MntR dimers bound to the native mnep promoter sequence.
To Be Published
9F1B
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BU of 9f1b by Molmil
Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
Authors:Yudin, D, Scaiola, A, Ban, N.
Deposit date:2024-04-18
Release date:2024-08-21
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:NAC guides a ribosomal multienzyme complex for nascent protein processing.
Nature, 2024

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PDB entries from 2024-09-04

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