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PDB: 88608 results

3EHH
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BU of 3ehh by Molmil
Crystal structure of DesKC-H188V in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Sensor kinase (YocF protein)
Authors:Albanesi, D, Alzari, P.M, Buschiazzo, A.
Deposit date:2008-09-12
Release date:2009-09-15
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural plasticity and catalysis regulation of a thermosensor histidine kinase
Proc.Natl.Acad.Sci.USA, 106, 2009
4QSX
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BU of 4qsx by Molmil
Structure of the bromodomain of human ATPase family AAA domain-containing protein 2 (ATAD2) in complex with 3'-deoxy thymidine
Descriptor: 1,2-ETHANEDIOL, 1-[(2R,5S)-5-(hydroxymethyl)tetrahydrofuran-2-yl]-5-methylpyrimidine-2,4(1H,3H)-dione, ATPase family AAA domain-containing protein 2, ...
Authors:Chaikuad, A, Felletar, I, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2014-07-06
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structure-based approaches towards identification of fragments for the low-druggability ATAD2 bromodomain
MedChemComm, 5, 2014
2HNT
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BU of 2hnt by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF HUMAN GAMMA-THROMBIN
Descriptor: GAMMA-THROMBIN
Authors:Tulinsky, A.
Deposit date:1994-08-23
Release date:1994-11-30
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic structure of human gamma-thrombin.
J.Biol.Chem., 269, 1994
4QU9
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BU of 4qu9 by Molmil
Caspase-3 F128A
Descriptor: ACE-ASP-GLU-VAL-ASP-CHLOROMETHYLKETONE INHIBITOR, AZIDE ION, Caspase-3
Authors:Cade, C, Swartz, P.D, MacKenzie, S.H, Clark, A.C.
Deposit date:2014-07-10
Release date:2014-11-05
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.561 Å)
Cite:Modifying caspase-3 activity by altering allosteric networks.
Biochemistry, 53, 2014
6VZ4
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BU of 6vz4 by Molmil
Cryo-EM structure of Sth1-Arp7-Arp9-Rtt102 bound to the nucleosome in ADP Beryllium Fluoride state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin-like protein ARP9, ...
Authors:Leschziner, A.E, Baker, R.W.
Deposit date:2020-02-27
Release date:2020-12-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural insights into assembly and function of the RSC chromatin remodeling complex.
Nat.Struct.Mol.Biol., 28, 2021
1TGM
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BU of 1tgm by Molmil
Crystal structure of a complex formed between group II phospholipase A2 and aspirin at 1.86 A resolution
Descriptor: 2-(ACETYLOXY)BENZOIC ACID, CALCIUM ION, Phospholipase A2, ...
Authors:Singh, N, Jabeen, T, Sharma, S, Bhushan, A, Singh, T.P.
Deposit date:2004-05-28
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of a complex formed between group II phospholipase A2 and aspirin at 1.86 A resolution
To be Published
6VZP
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BU of 6vzp by Molmil
HBV wild type capsid
Descriptor: Capsid protein
Authors:Zhao, Z, Wang, J, Zlotnick, A.
Deposit date:2020-02-28
Release date:2020-09-30
Last modified:2020-12-30
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The Integrity of the Intradimer Interface of the Hepatitis B Virus Capsid Protein Dimer Regulates Capsid Self-Assembly.
Acs Chem.Biol., 15, 2020
7TAP
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BU of 7tap by Molmil
Cryo-EM structure of archazolid A bound to yeast VO V-ATPase
Descriptor: Archazolid A, V-type proton ATPase subunit a, vacuolar isoform, ...
Authors:Keon, K.A, Rubinstein, J.L, Benlekbir, S, Kirsch, S.H, Muller, R.
Deposit date:2021-12-21
Release date:2022-02-23
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM of the Yeast V O Complex Reveals Distinct Binding Sites for Macrolide V-ATPase Inhibitors.
Acs Chem.Biol., 17, 2022
2W2F
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BU of 2w2f by Molmil
CRYSTAL STRUCTURE OF SINGLE POINT MUTANT ARG48GLN OF P-COUMARIC ACID DECARBOXYLASE FROM LACTOBACILLUS PLANTARUM STRUCTURAL INSIGHTS INTO THE ACTIVE SITE AND DECARBOXYLATION CATALYTIC MECHANISM
Descriptor: BARIUM ION, P-COUMARIC ACID DECARBOXYLASE
Authors:Rodriguez, H, Angulo, I, De Las Rivas, B, Campillo, N, Paez, J.A, Munoz, R, Mancheno, J.M.
Deposit date:2008-10-29
Release date:2010-02-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:P-Coumaric Acid Decarboxylase from Lactobacillus Plantarum: Structural Insights Into the Active Site and Decarboxylation Catalytic Mechanism.
Proteins, 78, 2010
1TE2
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BU of 1te2 by Molmil
Putative Phosphatase Ynic from Escherichia coli K12
Descriptor: 2-PHOSPHOGLYCOLIC ACID, 2-deoxyglucose-6-P phosphatase, CALCIUM ION
Authors:Kim, Y, Joachimiak, A, Evdokimova, E, Savchenko, A, Edwards, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-05-24
Release date:2004-08-03
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal Structure of Putative Phosphatase Ynic from Escherichia coli K12
To be Published
4QUR
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BU of 4qur by Molmil
Crystal Structure of stachydrine demethylase in complex with cyanide, oxygen, and N-methyl proline in a new orientation
Descriptor: 1-methyl-L-proline, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, COBALT HEXAMMINE(III), ...
Authors:Agarwal, R, Andi, B, Gizzi, A, Bonanno, J.B, Almo, S.C, Orville, A.M.
Deposit date:2014-07-11
Release date:2015-07-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.759 Å)
Cite:Tracking photoelectron induced in-crystallo enzyme catalysis
To be Published
5K71
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BU of 5k71 by Molmil
apo Dbr1
Descriptor: RNA lariat debranching enzyme, putative, SULFATE ION
Authors:Clark, N.E, Taylor, A.B, Hart, P.J.
Deposit date:2016-05-25
Release date:2016-12-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:The RNA lariat debranching enzyme Dbr1: metal dependence and branched RNA co-crystal structures
Proc.Natl.Acad.Sci.USA, 2016
7AZR
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BU of 7azr by Molmil
Crystal structure of the iron/manganese cambialistic superoxide dismutase from Rhodobacter capsulatus complex with Mn
Descriptor: CALCIUM ION, MANGANESE (II) ION, Superoxide dismutase [Fe]
Authors:Ponce-Salvatierra, A, Hermoso, J.A.
Deposit date:2020-11-17
Release date:2021-12-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional characterization of the cambialistic superoxide dismutase from Rhodobacter capsulatus.
To be published
5KBQ
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BU of 5kbq by Molmil
Pak1 in complex with bis-anilino pyrimidine inhibitor
Descriptor: Serine/threonine-protein kinase PAK 1, [4-methyl-3-[methyl-[2-[(3-methylsulfonyl-5-morpholin-4-yl-phenyl)amino]pyrimidin-4-yl]amino]phenyl]methanol
Authors:Ferguson, A.
Deposit date:2016-06-03
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Optimization of Highly Kinase Selective Bis-anilino Pyrimidine PAK1 Inhibitors.
ACS Med Chem Lett, 7, 2016
4R5Z
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BU of 4r5z by Molmil
Crystal structure of Rv3772 encoded aminotransferase
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
Authors:Nasir, N, Anant, A, Vyas, R, Biswal, B.K.
Deposit date:2014-08-22
Release date:2015-08-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of Mycobacterium tuberculosis HspAT and ArAT reveal structural basis of their distinct substrate specificities
Sci Rep, 6, 2016
7AZQ
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BU of 7azq by Molmil
Crystal structure of the iron/manganese cambialistic superoxide dismutase from Rhodobacter capsulatus complex with Fe
Descriptor: CALCIUM ION, FE (III) ION, Superoxide dismutase [Fe]
Authors:Ponce-Salvatierra, A, Hermoso, J.A.
Deposit date:2020-11-17
Release date:2021-12-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional characterization of the cambialistic superoxide dismutase from Rhodobacter capsulatus.
To be published
5KCH
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BU of 5kch by Molmil
SETDB1 in complex with an early stage, low affinity fragment candidate modelled at reduced occupancy into weak electron density
Descriptor: 4-methoxy-N-[(pyridin-2-yl)methyl]aniline, DIMETHYL SULFOXIDE, Histone-lysine N-methyltransferase SETDB1, ...
Authors:Tempel, W, Harding, R.J, Mader, P, Dobrovetsky, E, Walker, J.R, Brown, P.J, Schapira, M, Collins, P, Pearce, N, Brandao-Neto, J, Douangamath, A, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Santhakumar, V, Structural Genomics Consortium (SGC)
Deposit date:2016-06-06
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:SETDB1 in complex with an early stage, low affinity fragment candidate modelled at reduced occupancy
To Be Published
1JTS
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BU of 1jts by Molmil
DNA PROTECTION AND BINDING BY E. COLI DPS PROTEIN
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA PROTECTION DURING STARVATION PROTEIN
Authors:Luo, J, Liu, D, White, M.A, Fox, R.O.
Deposit date:2001-08-22
Release date:2003-06-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:DNA Protection and Binding by E. Coli Dps Protein
To be Published
3ZJ7
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BU of 3zj7 by Molmil
Crystal structure of strictosidine glucosidase in complex with inhibitor-1
Descriptor: (1R,2S,3S,4R,5R)-4-(cyclohexylamino)-5-(hydroxymethyl)cyclopentane-1,2,3-triol, STRICTOSIDINE-O-BETA-D-GLUCOSIDASE
Authors:Xia, L, Lin, H, Panjikar, S, Ruppert, M, Castiglia, A, Rajendran, C, Wang, M, Schuebel, H, Warzecha, H, Jaeger, V, Stoeckigt, J.
Deposit date:2013-01-17
Release date:2014-02-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ligand Structures of Synthetic Deoxa-Pyranosylamines with Raucaffricine and Strictosidine Glucosidases Provide Structural Insights Into Their Binding and Inhibitory Behaviours.
J.Enzyme.Inhib.Med.Chem., 30, 2015
6IP3
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BU of 6ip3 by Molmil
Structure of human telomeric DNA at 1.4 Angstroms resolution
Descriptor: DNA (5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), POTASSIUM ION
Authors:Saikrishnan, K, Nuthanakanti, A, Srivatsan, S.G, Ahmad, I.
Deposit date:2018-11-01
Release date:2019-05-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Probing G-quadruplex topologies and recognition concurrently in real time and 3D using a dual-app nucleoside probe.
Nucleic Acids Res., 47, 2019
1K02
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BU of 1k02 by Molmil
Crystal Structure of Old Yellow Enzyme Mutant Gln114Asn
Descriptor: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, NADPH DEHYDROGENASE 1
Authors:Brown, B.J, Hyun, J, Duvvuri, S.D, Karplus, P.A, Massey, V.
Deposit date:2001-09-18
Release date:2001-09-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The role of glutamine 114 in old yellow enzyme
J.Biol.Chem., 277, 2002
7SV9
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BU of 7sv9 by Molmil
Structure of EmrE-D3 mutant in complex with monobody L10 and TPP
Descriptor: L10 monobody, Multidrug transporter EmrE, TETRAPHENYLPHOSPHONIUM
Authors:Kermani, A.A, Stockbridge, R.B.
Deposit date:2021-11-18
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.36 Å)
Cite:Crystal structures of bacterial small multidrug resistance transporter EmrE in complex with structurally diverse substrates.
Elife, 11, 2022
7T00
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BU of 7t00 by Molmil
Structure of EmrE-D3 mutant in complex with monobody L10 and benzyltrimethylammonium
Descriptor: L10 monobody, Multidrug transporter EmrE, benzyltrimethylammonium
Authors:Kermani, A.A, Stockbridge, R.B.
Deposit date:2021-11-29
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.91 Å)
Cite:Crystal structures of bacterial small multidrug resistance transporter EmrE in complex with structurally diverse substrates.
Elife, 11, 2022
7SVX
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BU of 7svx by Molmil
Structure of EmrE-D3 mutant in complex with monobody L10 and harmane
Descriptor: 1-methyl-9H-pyrido[3,4-b]indole, L10 monobody, Multidrug transporter EmrE
Authors:Kermani, A.A, Stockbridge, R.B.
Deposit date:2021-11-19
Release date:2022-03-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Crystal structures of bacterial small multidrug resistance transporter EmrE in complex with structurally diverse substrates.
Elife, 11, 2022
3E3Y
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BU of 3e3y by Molmil
Q138F HincII bound to GTTAAC and cocrystallized with 5 mM Ca2+
Descriptor: 5'-D(*DGP*DCP*DCP*DGP*DGP*DTP*DTP*DAP*DAP*DCP*DCP*DGP*DGP*DC)-3', CALCIUM ION, SODIUM ION, ...
Authors:Horton, N.C, Babic, A.C, Little, E.J, Manohar, V.M.
Deposit date:2008-08-08
Release date:2008-08-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:DNA distortion and specificity in a sequence-specific endonuclease.
J.Mol.Biol., 383, 2008

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