Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7DWO
DownloadVisualize
BU of 7dwo by Molmil
Crystal structure of Vibrio fischeri DarR in complex with DNA reveals the transcriptional activation mechanism of LTTR family members
Descriptor: Predicted DNA-binding transcriptional regulator
Authors:Wang, W.W, Wu, H, He, J.H, Yu, F.
Deposit date:2021-01-17
Release date:2021-07-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.611 Å)
Cite:Crystal structure details of Vibrio fischeri DarR and mutant DarR-M202I from LTTR family reveals their activation mechanism.
Int.J.Biol.Macromol., 183, 2021
7DWN
DownloadVisualize
BU of 7dwn by Molmil
Crystal structure of Vibrio fischeri DarR in complex with DNA reveals the transcriptional activation mechanism of LTTR family members
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Predicted DNA-binding transcriptional regulator
Authors:Wang, W.W, Wu, H, He, J.H, Yu, F.
Deposit date:2021-01-17
Release date:2021-07-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal structure details of Vibrio fischeri DarR and mutant DarR-M202I from LTTR family reveals their activation mechanism.
Int.J.Biol.Macromol., 183, 2021
5KW1
DownloadVisualize
BU of 5kw1 by Molmil
Crystal Structure of the Two Tandem RRM Domains of PUF60 Bound to a Modified AdML Pre-mRNA 3' Splice Site Analogue
Descriptor: CHLORIDE ION, DNA/RNA (30-MER), Poly(U)-binding-splicing factor PUF60
Authors:Crichlow, G.V, Hsiao, H.-H, Albright, R, Lolis, E.J, Braddock, D.T.
Deposit date:2016-07-15
Release date:2017-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Unraveling the mechanism of recognition of the 3' splice site of the adenovirus major late promoter intron by the alternative splicing factor PUF60.
Plos One, 15, 2020
5KVY
DownloadVisualize
BU of 5kvy by Molmil
CRYSTAL STRUCTURE OF THE TWO TANDEM RRM DOMAINS OF PUF60 BOUND TO A PORTION OF AN ADML PRE-MRNA 3' SPLICE SITE ANALOG
Descriptor: CHLORIDE ION, DNA (30-MER), Poly(U)-binding-splicing factor PUF60
Authors:Hsiao, H.-H, Crichlow, G.V, Albright, R.A, Murphy, J.W, Lolis, E.J, Braddock, D.T.
Deposit date:2016-07-15
Release date:2017-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Unraveling the mechanism of recognition of the 3' splice site of the adenovirus major late promoter intron by the alternative splicing factor PUF60.
Plos One, 15, 2020
7DTS
DownloadVisualize
BU of 7dts by Molmil
Crystal structure of RNase L in complex with AC40357
Descriptor: 5'-O-MONOPHOSPHORYLADENYLYL(2'->5')ADENYLYL(2'->5')ADENOSINE, PHOSPHATE ION, Ribonuclease L, ...
Authors:Tang, J, Huang, H.
Deposit date:2021-01-06
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Identification of Small Molecule Inhibitors of RNase L by Fragment-Based Drug Discovery
J.Med.Chem., 65, 2022
7ELW
DownloadVisualize
BU of 7elw by Molmil
Crystal structure of RNase L in complex with Myricetin
Descriptor: 3,5,7-TRIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-4H-CHROMEN-4-ONE, PHOSPHATE ION, Ribonuclease L, ...
Authors:Tang, J, Huang, H.
Deposit date:2021-04-12
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Identification of Small Molecule Inhibitors of RNase L by Fragment-Based Drug Discovery
J.Med.Chem., 65, 2022
5KW6
DownloadVisualize
BU of 5kw6 by Molmil
Two Tandem RRM Domains of PUF60 Bound to an AdML Pre-mRNA 3' Splice Site Analogue with a Modified Binding-Site Nucleic Acid Base
Descriptor: DNA (30-MER), Poly(U)-binding-splicing factor PUF60
Authors:Crichlow, G.V, Hsiao, H.-H, Albright, R, Lolis, E.J, Braddock, D.T.
Deposit date:2016-07-15
Release date:2017-08-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Unraveling the mechanism of recognition of the 3' splice site of the adenovirus major late promoter intron by the alternative splicing factor PUF60.
Plos One, 15, 2020
7XZ5
DownloadVisualize
BU of 7xz5 by Molmil
GPR119-Gs-LPC complex
Descriptor: (4R,7R,18E)-4,7-dihydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphaheptacos-18-en-1-aminium 4-oxide, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Xu, P, Huang, S, Jiang, Y, Xu, H.E.
Deposit date:2022-06-02
Release date:2022-08-24
Last modified:2022-10-05
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural identification of lysophosphatidylcholines as activating ligands for orphan receptor GPR119.
Nat.Struct.Mol.Biol., 29, 2022
7XZ6
DownloadVisualize
BU of 7xz6 by Molmil
GPR119-Gs-APD668 complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Xu, P, Huang, S, Jiang, Y, Xu, H.E.
Deposit date:2022-06-02
Release date:2022-08-24
Last modified:2022-10-05
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural identification of lysophosphatidylcholines as activating ligands for orphan receptor GPR119.
Nat.Struct.Mol.Biol., 29, 2022
7D0L
DownloadVisualize
BU of 7d0l by Molmil
The major capsid of Omono River virus (strain:LZ), protrusion-free status.
Descriptor: Capsid protein
Authors:Shao, Q, Jia, X, Gao, Y, Liu, Z.
Deposit date:2020-09-11
Release date:2021-03-03
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Cryo-EM reveals a previously unrecognized structural protein of a dsRNA virus implicated in its extracellular transmission.
Plos Pathog., 17, 2021
7CZ6
DownloadVisualize
BU of 7cz6 by Molmil
Protrusion structure of Omono River virus
Descriptor: Capsid protein
Authors:Shao, Q, Jia, X, Gao, Y, Liu, Z.
Deposit date:2020-09-07
Release date:2021-03-03
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM reveals a previously unrecognized structural protein of a dsRNA virus implicated in its extracellular transmission.
Plos Pathog., 17, 2021
7D0K
DownloadVisualize
BU of 7d0k by Molmil
The icosahedral capsid of Omono River virus (strain:LZ)
Descriptor: Capsid protein
Authors:Shao, Q, Jia, X, Gao, Y, Liu, Z.
Deposit date:2020-09-11
Release date:2021-03-03
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Cryo-EM reveals a previously unrecognized structural protein of a dsRNA virus implicated in its extracellular transmission.
Plos Pathog., 17, 2021
7EBO
DownloadVisualize
BU of 7ebo by Molmil
Crystal structure of a feruloyl esterase LP_0796 from Lactobacillus plantarum
Descriptor: Carboxylesterase, SULFATE ION
Authors:Zhang, H.W, Wang, Y.L, Xin, F.J.
Deposit date:2021-03-10
Release date:2022-08-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A reverse catalytic triad Asp containing loop shaping a wide substrate binding pocket of a feruloyl esterase from Lactobacillus plantarum.
Int.J.Biol.Macromol., 184, 2021
7DTR
DownloadVisualize
BU of 7dtr by Molmil
Structure of an AcrIF protein
Descriptor: AcrIF24
Authors:Yue, F, Peipei, Y.
Deposit date:2021-01-06
Release date:2022-01-19
Last modified:2022-08-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Insights into the inhibition of type I-F CRISPR-Cas system by a multifunctional anti-CRISPR protein AcrIF24.
Nat Commun, 13, 2022
7ELN
DownloadVisualize
BU of 7eln by Molmil
Structure of Csy-AcrIF24-dsDNA
Descriptor: 54-MER DNA, AcrIF24, CRISPR type I-F/YPEST-associated protein Csy2, ...
Authors:Zhang, L, Feng, Y.
Deposit date:2021-04-12
Release date:2022-04-20
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Insights into the inhibition of type I-F CRISPR-Cas system by a multifunctional anti-CRISPR protein AcrIF24.
Nat Commun, 13, 2022
7ELM
DownloadVisualize
BU of 7elm by Molmil
Structure of Csy-AcrIF24
Descriptor: AcrIF24, CRISPR type I-F/YPEST-associated protein Csy2, CRISPR-associated protein Csy3, ...
Authors:Zhang, L, Feng, Y.
Deposit date:2021-04-12
Release date:2022-04-20
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:Insights into the inhibition of type I-F CRISPR-Cas system by a multifunctional anti-CRISPR protein AcrIF24.
Nat Commun, 13, 2022
6LYU
DownloadVisualize
BU of 6lyu by Molmil
Structure of the BAM complex
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Xiao, L, Huang, Y.
Deposit date:2020-02-15
Release date:2021-01-13
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structures of the beta-barrel assembly machine recognizing outer membrane protein substrates.
Faseb J., 35, 2021
6LYQ
DownloadVisualize
BU of 6lyq by Molmil
Structure of the BAM complex
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Xiao, L, Huang, Y.
Deposit date:2020-02-15
Release date:2021-01-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Structures of the beta-barrel assembly machine recognizing outer membrane protein substrates.
Faseb J., 35, 2021
7WE6
DownloadVisualize
BU of 7we6 by Molmil
Structure of Csy-AcrIF24-dsDNA
Descriptor: AcrIF24, CRISPR type I-F/YPEST-associated protein Csy2, CRISPR-associated protein Csy3, ...
Authors:Zhang, L, Feng, Y.
Deposit date:2021-12-22
Release date:2022-04-20
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Insights into the inhibition of type I-F CRISPR-Cas system by a multifunctional anti-CRISPR protein AcrIF24.
Nat Commun, 13, 2022
6LYR
DownloadVisualize
BU of 6lyr by Molmil
Structure of the BAM complex
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Xiao, L, Huang, Y.
Deposit date:2020-02-15
Release date:2021-01-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:Structures of the beta-barrel assembly machine recognizing outer membrane protein substrates.
Faseb J., 35, 2021
6LYS
DownloadVisualize
BU of 6lys by Molmil
Structure of the BAM complex
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Xiao, L, Huang, Y.
Deposit date:2020-02-15
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structures of the beta-barrel assembly machine recognizing outer membrane protein substrates.
Faseb J., 35, 2021
6M0J
DownloadVisualize
BU of 6m0j by Molmil
Crystal structure of SARS-CoV-2 spike receptor-binding domain bound with ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, CHLORIDE ION, ...
Authors:Wang, X, Lan, J, Ge, J, Yu, J, Shan, S.
Deposit date:2020-02-21
Release date:2020-03-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of the SARS-CoV-2 spike receptor-binding domain bound to the ACE2 receptor.
Nature, 581, 2020
7X29
DownloadVisualize
BU of 7x29 by Molmil
MERS-CoV spike complex with S41 neutralizing antibody Fab Class2 (1u2d RBD with 2Fab)
Descriptor: Spike glycoprotein, antibody S41 heavy chain, antibody S41 light chain
Authors:Zeng, J.W, Zhang, S.Y, Zhou, H.X, Wang, X.W.
Deposit date:2022-02-25
Release date:2022-11-09
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Cryoelectron microscopy structures of a human neutralizing antibody bound to MERS-CoV spike glycoprotein.
Front Microbiol, 13, 2022
7X2A
DownloadVisualize
BU of 7x2a by Molmil
MERS-CoV spike complex with S41 neutralizing antibody Fab Class1 (1u2d RBD with 1Fab)
Descriptor: MERS-CoV Spike glycoprotein, antibody S41 heavy chain, antibody S41 light chain
Authors:Zeng, J.W, Zhang, S.Y, Zhou, H.X, Wang, X.W.
Deposit date:2022-02-25
Release date:2022-11-09
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Cryoelectron microscopy structures of a human neutralizing antibody bound to MERS-CoV spike glycoprotein.
Front Microbiol, 13, 2022
7X28
DownloadVisualize
BU of 7x28 by Molmil
MERS-CoV spike complex with S41 neutralizing antibody Fab Class3 (2u1d RBD with 2Fab)
Descriptor: Spike glycoprotein, antibody S41 heavy chain, antibody S41 light chain
Authors:Zeng, J.W, Zhang, S.Y, Zhou, H.X, Wang, X.W.
Deposit date:2022-02-25
Release date:2023-01-18
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Cryoelectron microscopy structures of a human neutralizing antibody bound to MERS-CoV spike glycoprotein.
Front Microbiol, 13, 2022

219869

數據於2024-05-15公開中

PDB statisticsPDBj update infoContact PDBjnumon