Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7LMY
DownloadVisualize
BU of 7lmy by Molmil
Cryo-EM structure of human p97 in complex with NMS-873 in the presence of ATP, Npl4/Ufd1, and Ub6
分子名称: 3-[3-cyclopentylsulfanyl-5-[[3-methyl-4-(4-methylsulfonylphenyl)phenoxy]methyl]-1,2,4-triazol-4-yl]pyridine, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Pan, M, Yu, Y, Liu, L, Zhao, M.
登録日2021-02-06
公開日2021-09-15
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Mechanistic insight into substrate processing and allosteric inhibition of human p97.
Nat.Struct.Mol.Biol., 28, 2021
7LN5
DownloadVisualize
BU of 7ln5 by Molmil
Cryo-EM structure of human p97 in complex with Npl4/Ufd1 and polyubiquitinated Ub-Eos (CHAPSO, Class 1, Close State)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Pan, M, Yu, Y, Liu, L, Zhao, M.
登録日2021-02-06
公開日2021-09-15
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Mechanistic insight into substrate processing and allosteric inhibition of human p97.
Nat.Struct.Mol.Biol., 28, 2021
7LN3
DownloadVisualize
BU of 7ln3 by Molmil
Cryo-EM structure of human p97 in complex with Npl4/Ufd1 and polyubiquitinated Ub-Eos (FOM, Class 2)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Pan, M, Yu, Y, Liu, L, Zhao, M.
登録日2021-02-06
公開日2021-09-15
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Mechanistic insight into substrate processing and allosteric inhibition of human p97.
Nat.Struct.Mol.Biol., 28, 2021
7LN0
DownloadVisualize
BU of 7ln0 by Molmil
Cryo-EM structure of human p97 in complex with Npl4/Ufd1 and Ub6 (Class 2)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Hexa-ubiquitin, ...
著者Pan, M, Yu, Y, Liu, L, Zhao, M.
登録日2021-02-06
公開日2021-09-15
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Mechanistic insight into substrate processing and allosteric inhibition of human p97.
Nat.Struct.Mol.Biol., 28, 2021
7LN1
DownloadVisualize
BU of 7ln1 by Molmil
Cryo-EM structure of human p97 in complex with Npl4/Ufd1 and Ub6 (Class 3)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Hexa-ubiquitin, ...
著者Pan, M, Yu, Y, Liu, L, Zhao, M.
登録日2021-02-06
公開日2021-09-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Mechanistic insight into substrate processing and allosteric inhibition of human p97.
Nat.Struct.Mol.Biol., 28, 2021
7LN2
DownloadVisualize
BU of 7ln2 by Molmil
Cryo-EM structure of human p97 in complex with Npl4/Ufd1 and polyubiquitinated Ub-Eos (FOM, Class 1)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Pan, M, Yu, Y, Liu, L, Zhao, M.
登録日2021-02-06
公開日2021-09-15
実験手法ELECTRON MICROSCOPY (3.63 Å)
主引用文献Mechanistic insight into substrate processing and allosteric inhibition of human p97.
Nat.Struct.Mol.Biol., 28, 2021
7LMZ
DownloadVisualize
BU of 7lmz by Molmil
Cryo-EM structure of human p97 in complex with Npl4/Ufd1 and Ub6 (Class 1)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Hexa-ubiquitin, ...
著者Pan, M, Yu, Y, Liu, L, Zhao, M.
登録日2021-02-06
公開日2021-09-15
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Mechanistic insight into substrate processing and allosteric inhibition of human p97.
Nat.Struct.Mol.Biol., 28, 2021
7LN6
DownloadVisualize
BU of 7ln6 by Molmil
Cryo-EM structure of human p97 in complex with Npl4/Ufd1 and polyubiquitinated Ub-Eos (CHAPSO, Class 2, Open State)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Pan, M, Yu, Y, Liu, L, Zhao, M.
登録日2021-02-06
公開日2021-09-15
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Mechanistic insight into substrate processing and allosteric inhibition of human p97.
Nat.Struct.Mol.Biol., 28, 2021
7MEX
DownloadVisualize
BU of 7mex by Molmil
Structure of yeast Ubr1 in complex with Ubc2 and N-degron
分子名称: E3 ubiquitin-protein ligase UBR1, N-degron, Ubiquitin, ...
著者Pan, M, Zheng, Q, Wang, T, Liang, L, Yu, Y, Liu, L, Zhao, M.
登録日2021-04-08
公開日2021-11-24
最終更新日2021-12-22
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Structural insights into Ubr1-mediated N-degron polyubiquitination.
Nature, 600, 2021
7MEY
DownloadVisualize
BU of 7mey by Molmil
Structure of yeast Ubr1 in complex with Ubc2 and monoubiquitinated N-degron
分子名称: 2-(ethylamino)ethane-1-thiol, E3 ubiquitin-protein ligase UBR1, Monoubiquitinated N-degron, ...
著者Pan, M, Zheng, Q, Wang, T, Liang, L, Yu, Y, Liu, L, Zhao, M.
登録日2021-04-08
公開日2021-11-24
最終更新日2021-12-22
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Structural insights into Ubr1-mediated N-degron polyubiquitination.
Nature, 600, 2021
4WVR
DownloadVisualize
BU of 4wvr by Molmil
Crystal structure of Dscam1 Ig7 domain, isoform 5
分子名称: Down syndrome cell adhesion molecule, isoform AK
著者Chen, Q, Yu, Y, Li, S, Cheng, L.
登録日2014-11-07
公開日2015-11-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.948 Å)
主引用文献Structural basis of Dscam1 homodimerization: Insights into context constraint for protein recognition
Sci Adv, 2, 2016
4X83
DownloadVisualize
BU of 4x83 by Molmil
Crystal structure of Dscam1 isoform 7.44, N-terminal four Ig domains
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者Chen, Q, Yu, Y, Li, S.A, Cheng, L.
登録日2014-12-10
公開日2015-12-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Structural basis of Dscam1 homodimerization: Insights into context constraint for protein recognition
Sci Adv, 2, 2016
4X9B
DownloadVisualize
BU of 4x9b by Molmil
Crystal structure of Dscam1 isoform 4.44, N-terminal four Ig domains
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Down syndrome cell adhesion molecule, isoform 4.44, ...
著者Chen, Q, Yu, Y, Li, S.A, Cheng, L.
登録日2014-12-11
公開日2015-12-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of Dscam1 homodimerization: Insights into context constraint for protein recognition
Sci Adv, 2, 2016
4X9F
DownloadVisualize
BU of 4x9f by Molmil
Crystal structure of Dscam1 isoform 6.9, N-terminal four Ig domains
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Down Syndrome Cell Adhesion Molecule isoform 6.9, GLYCEROL, ...
著者Chen, Q, Yu, Y, Li, S.A, Cheng, L.
登録日2014-12-11
公開日2015-12-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis of Dscam1 homodimerization: Insights into context constraint for protein recognition
Sci Adv, 2, 2016
4X5L
DownloadVisualize
BU of 4x5l by Molmil
Crystal structure of Dscam1 Ig7 domain, isoform 9
分子名称: Down syndrome cell adhesion molecule, isoform AM, SODIUM ION
著者Chen, Q, Yu, Y, Li, S.A, Cheng, L.
登録日2014-12-05
公開日2015-12-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.374 Å)
主引用文献Structural basis of Dscam1 homodimerization: Insights into context constraint for protein recognition
Sci Adv, 2, 2016
4XHQ
DownloadVisualize
BU of 4xhq by Molmil
Re-refinement the crystal structure of Dscam1 isoform 1.34, N-terminal four Ig domains
分子名称: CHLORIDE ION, Dscam, GLYCEROL, ...
著者Chen, Q, Yu, Y.
登録日2015-01-06
公開日2016-10-12
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.948 Å)
主引用文献Structural basis of Dscam1 homodimerization: Insights into context constraint for protein recognition
Sci Adv, 2, 2016
4XB7
DownloadVisualize
BU of 4xb7 by Molmil
Crystal structure of Dscam1 isoform 4.4, N-terminal four Ig domains
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Down syndrome cell adhesion molecule, isoform 4.4, ...
著者Chen, Q, Yu, Y, Li, S.A, Cheng, L.
登録日2014-12-16
公開日2015-12-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (4.004 Å)
主引用文献Structural basis of Dscam1 homodimerization: Insights into context constraint for protein recognition
Sci Adv, 2, 2016
4X9G
DownloadVisualize
BU of 4x9g by Molmil
Crystal structure of Dscam1 isoform 6.44, N-terminal four Ig domains
分子名称: Down Syndrome Cell Adhesion Molecule isoform 6.44, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Chen, Q, Yu, Y, Li, S.A, Cheng, L.
登録日2014-12-11
公開日2015-12-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.403 Å)
主引用文献Structural basis of Dscam1 homodimerization: Insights into context constraint for protein recognition
Sci Adv, 2, 2016
4X9I
DownloadVisualize
BU of 4x9i by Molmil
Crystal structure of Dscam1 isoform 9.44, N-terminal four Ig domains
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Down Syndrome Cell Adhesion Molecule, isoform 9.44, ...
著者Chen, Q, Yu, Y, Li, S.A, cheng, L.
登録日2014-12-11
公開日2015-12-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.904 Å)
主引用文献Structural basis of Dscam1 homodimerization: Insights into context constraint for protein recognition
Sci Adv, 2, 2016
4XB8
DownloadVisualize
BU of 4xb8 by Molmil
Crystal structure of Dscam1 isoform 9.44, N-terminal four Ig domains (with zinc)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Down Syndrome Cell Adhesion Molecule, ...
著者Chen, Q, Yu, Y, Li, S.A, cheng, L.
登録日2014-12-16
公開日2015-12-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.202 Å)
主引用文献Structural basis of Dscam1 homodimerization: Insights into context constraint for protein recognition
Sci Adv, 2, 2016
5BOA
DownloadVisualize
BU of 5boa by Molmil
Crystal Structure of the Meningitis Pathogen Streptococcus suis adhesion Fhb bound to the disaccharide receptor Gb2
分子名称: Translation initiation factor 2 (IF-2 GTPase), alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose
著者Zhang, C, Yu, Y, Yang, M, Jiang, Y.
登録日2015-05-27
公開日2016-05-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.708 Å)
主引用文献Structural basis of the interaction between the meningitis pathogen Streptococcus suis adhesin Fhb and its human receptor.
Febs Lett., 590, 2016
7CDA
DownloadVisualize
BU of 7cda by Molmil
Crystal structure of T2R-TTL-PAC complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
著者Chen, L.J, Chen, Q, Yu, Y, Yang, J.H.
登録日2020-06-19
公開日2021-06-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.659 Å)
主引用文献Small Molecules Promote Selective Denaturation and Degradation of Tubulin Heterodimers through a Low-Barrier Hydrogen Bond.
J.Med.Chem., 65, 2022
7CEK
DownloadVisualize
BU of 7cek by Molmil
Crystal structure of T2R-TTL-BML-284 complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Chen, L.J, Chen, Q, Yu, Y, Yang, J.H.
登録日2020-06-23
公開日2021-06-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.696 Å)
主引用文献Small Molecules Promote Selective Denaturation and Degradation of Tubulin Heterodimers through a Low-Barrier Hydrogen Bond.
J.Med.Chem., 65, 2022
7CE6
DownloadVisualize
BU of 7ce6 by Molmil
Crystal structure of T2R-TTL-Compound9 complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
著者Chen, L.J, Chen, Q, Yu, Y, Yang, J.H.
登録日2020-06-22
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.695 Å)
主引用文献Small Molecules Promote Selective Denaturation and Degradation of Tubulin Heterodimers through a Low-Barrier Hydrogen Bond.
J.Med.Chem., 65, 2022
7CLD
DownloadVisualize
BU of 7cld by Molmil
Crystal structure of T2R-TTL-Cevipabulin complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-[2,6-bis(fluoranyl)-4-[3-(methylamino)propoxy]phenyl]-5-chloranyl-N-[(2S)-1,1,1-tris(fluoranyl)propan-2-yl]-[1,2,4]triazolo[1,5-a]pyrimidin-7-amine, CALCIUM ION, ...
著者Chen, L.J, Chen, Q, Yu, Y, Yang, J.H.
登録日2020-07-20
公開日2021-07-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.611 Å)
主引用文献Cevipabulin-tubulin complex reveals a novel agent binding site on alpha-tubulin with tubulin degradation effect.
Sci Adv, 7, 2021

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon