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4QBE
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BU of 4qbe by Molmil
The second sphere residue T263 is important for function and activity of PTP1B through modulating WPD loop
分子名称: Tyrosine-protein phosphatase non-receptor type 1
著者Xiao, P, Wang, X, Wang, H.M, Fu, X.L, Cui, F.A, Yu, X, Bi, W.X.
登録日2014-05-08
公開日2014-12-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.292 Å)
主引用文献The second-sphere residue T263 is important for the function and catalytic activity of PTP1B via interaction with the WPD-loop
Int.J.Biochem.Cell Biol., 57C, 2014
4QBW
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BU of 4qbw by Molmil
The second sphere residue T263 is important for function and activity of PTP1B through modulating WPD loop
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1
著者Xiao, P, Wang, X, Wang, H.M, Fu, X.L, Cui, F.A, Yu, X, Bi, W.X, Sun, J.P.
登録日2014-05-08
公開日2015-02-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.912 Å)
主引用文献The second-sphere residue T263 is important for the function and catalytic activity of PTP1B via interaction with the WPD-loop
Int.J.Biochem.Cell Biol., 57, 2014
4QAP
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BU of 4qap by Molmil
The second sphere residue T263 is important for function and activity of PTP1B through modulating WPD loop
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1
著者Xiao, P, Wang, X, Wang, H.M, Fu, X.L, Cui, F.A, Yu, X, Bi, W.X, Sun, J.P.
登録日2014-05-05
公開日2015-02-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献The second-sphere residue T263 is important for the function and catalytic activity of PTP1B via interaction with the WPD-loop
Int.J.Biochem.Cell Biol., 57, 2014
5UZB
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BU of 5uzb by Molmil
Cryo-EM structure of the MAL TIR domain filament
分子名称: Toll/interleukin-1 receptor domain-containing adapter protein
著者Ve, T, Vajjhala, P.R, Hedger, A, Croll, T, DiMaio, F, Horsefield, S, Yu, X, Lavrencic, P, Hassan, Z, Morgan, G.P, Mansell, A, Mobli, M, O'Carrol, A, Chauvin, B, Gambin, Y, Sierecki, E, Landsberg, M.J, Stacey, K.J, Egelman, E.H, Kobe, B.
登録日2017-02-25
公開日2017-07-26
最終更新日2020-01-15
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Structural basis of TIR-domain-assembly formation in MAL- and MyD88-dependent TLR4 signaling.
Nat. Struct. Mol. Biol., 24, 2017
5VWG
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BU of 5vwg by Molmil
Galectin-8 N terminal domain in complex with Methyl 3-O-[1-carboxyethyl]-beta-D-galactopyranoside
分子名称: Galectin-8, methyl 3-O-[(1R)-1-carboxyethyl]-beta-D-galactopyranoside
著者Bohari, M.H, Yu, X, Blanchard, H.
登録日2017-05-21
公開日2018-05-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Galectin-8 N terminal domain in complex with Methyl 3-O-[1-carboxyethyl]-beta-D-galactopyranoside
To Be Published
5W7G
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BU of 5w7g by Molmil
An envelope of a filamentous hyperthermophilic virus carries lipids in a horseshoe conformation
分子名称: DNA (253-MER), ORF132, ORF140
著者Kasson, P, DiMaio, F, Yu, X, Lucas-Staat, S, Krupovic, M, Schouten, S, Prangishvili, D, Egelman, E.
登録日2017-06-19
公開日2017-07-19
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Model for a novel membrane envelope in a filamentous hyperthermophilic virus.
Elife, 6, 2017
5A2T
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BU of 5a2t by Molmil
The Molecular Basis for Flexibility in the Flexible Filamentous Plant Viruses
分子名称: BAMBOO MOSAIC VIRUS, COAT PROTEIN
著者DiMaio, F, Chen, C.C, Yu, X, Frenz, B, Hsu, Y.H, Lin, N.S, Egelman, E.H.
登録日2015-05-23
公開日2015-07-22
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (5.6 Å)
主引用文献The Molecular Basis for Flexibility in the Flexible Filamentous Plant Viruses.
Nat.Struct.Mol.Biol., 22, 2015
4BYH
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BU of 4byh by Molmil
Crystal structure of sialylated IgG Fc
分子名称: CHLORIDE ION, IG GAMMA-1 CHAIN C REGION, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Crispin, M, Yu, X, Bowden, T.A.
登録日2013-07-19
公開日2013-08-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Sialylated Igg Fc: Implications for the Mechanism of Intravenous Immunoglobulin Therapy.
Proc.Natl.Acad.Sci.USA, 110, 2013
4ICZ
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BU of 4icz by Molmil
HER2 1221/1222 phosphorylation regulated by PTPN9
分子名称: HER2, Tyrosine-protein phosphatase non-receptor type 9
著者Xu, Y.F, Wang, H.M, Liu, C.H, Yu, X, Sun, J.P.
登録日2012-12-11
公開日2013-12-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献HER2 1221/1222 phosphorylation regulated by PTPN9
To be Published
4E2I
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BU of 4e2i by Molmil
The Complex Structure of the SV40 Helicase Large T Antigen and p68 Subunit of DNA Polymerase Alpha-Primase
分子名称: DNA polymerase alpha subunit B, Large T antigen, ZINC ION
著者Zhou, B, Arnett, D.R, Yu, X, Brewster, A, Sowd, G.A, Xie, C.L, Vila, S, Gai, D, Fanning, E, Chen, X.S.
登録日2012-03-08
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (5 Å)
主引用文献Structural basis for the interaction of a hexameric replicative helicase with the regulatory subunit of human DNA polymerase alpha-primase.
J.Biol.Chem., 287, 2012
4KW9
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BU of 4kw9 by Molmil
Crystal Structure of Green Fluorescent Protein
分子名称: CHLORIDE ION, Green fluorescent protein, ZINC ION
著者Barnard, T.J, Yu, X, Noinaj, N, Taraska, J.W.
登録日2013-05-23
公開日2014-04-09
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Green Fluorescent Protein
To be Published
4KW8
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BU of 4kw8 by Molmil
Crystal Structure of Green Fluorescent Protein
分子名称: Green fluorescent protein, NICKEL (II) ION
著者Barnard, T.J, Yu, X, Noinaj, N, Taraska, J.W.
登録日2013-05-23
公開日2014-04-09
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (2.459 Å)
主引用文献Crystal Structure of Green Fluorescent Protein
To be Published
4KW4
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BU of 4kw4 by Molmil
Crystal Structure of Green Fluorescent Protein
分子名称: Green fluorescent protein
著者Barnard, T.J, Yu, X, Noinaj, N, Taraska, J.W.
登録日2013-05-23
公開日2014-04-09
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (1.746 Å)
主引用文献Crystal Structure of Green Fluorescent Protein
To be Published
4GFU
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BU of 4gfu by Molmil
PTPN18 in complex with HER2-pY1248 phosphor-peptides
分子名称: HER2-pY1248 phosphor-peptide, Tyrosine-protein phosphatase non-receptor type 18
著者Wang, H.M, Yang, F, Du, Y.J, Yang, D.X, Zhang, Y, Yu, X, Sun, J.P.
登録日2012-08-04
公開日2013-08-07
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献PTPN18-HER2 peptides
To be Published
4GFV
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BU of 4gfv by Molmil
PTPN18 in complex with HER2-pY1196 phosphor-peptides
分子名称: HER2-pY1196 phosphor-peptide, Tyrosine-protein phosphatase non-receptor type 18
著者Wang, H.M, Yang, F, Du, Y.J, Yang, D.X, Zhang, Y, Yu, X, Sun, J.P.
登録日2012-08-04
公開日2013-10-23
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.095 Å)
主引用文献PTPN18-HER2 peptides
To be Published
8EYO
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BU of 8eyo by Molmil
Crystal Structure of Human Mitochondrial NADP+ Malic Enzyme 3 with NADP bound
分子名称: CITRIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADP-dependent malic enzyme, ...
著者Shaffer, P.L, Grell, T.A.J, Mason, M, Thompson, A.A, Riley, D, Wagner, M.V, Steele, R, Ortiz-Meoz, R, Wadia, J, Sharma, S, Yu, X.
登録日2022-10-28
公開日2023-02-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Integrative structural and functional analysis of human malic enzyme 3: A potential therapeutic target for pancreatic cancer.
Heliyon, 8, 2022
8EYN
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BU of 8eyn by Molmil
Crystal Structure of Human Mitochondrial NADP+ Malic Enzyme 3 in Apo Form
分子名称: CITRIC ACID, NADP-dependent malic enzyme, mitochondrial
著者Shaffer, P.L, Grell, T.A.J, Mason, M, Thompson, A.A, Riley, D, Wagner, M.V, Steele, R, Ortiz-Meoz, R, Wadia, J, Sharma, S, Yu, X.
登録日2022-10-28
公開日2023-02-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Integrative structural and functional analysis of human malic enzyme 3: A potential therapeutic target for pancreatic cancer.
Heliyon, 8, 2022
6L03
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BU of 6l03 by Molmil
structure of PTP-MEG2 and MUNC18-1-pY145 peptide complex
分子名称: Tyrosine-protein phosphatase non-receptor type 9, stxbp1-pY145 peptide
著者Xu, Y.F, Chen, X, Yu, X, Sun, J.P.
登録日2019-09-25
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.084 Å)
主引用文献PTP-MEG2 regulates quantal size and fusion pore opening through two distinct structural bases and substrates.
Embo Rep., 22, 2021
6KZQ
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BU of 6kzq by Molmil
structure of PTP-MEG2 and NSF-pY83 peptide complex
分子名称: NSF-pY83 peptide, Tyrosine-protein phosphatase non-receptor type 9
著者Xu, Y.F, Chen, X, Yu, X, Sun, J.P.
登録日2019-09-25
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献PTP-MEG2 regulates quantal size and fusion pore opening through two distinct structural bases and substrates.
Embo Rep., 22, 2021
6OGE
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BU of 6oge by Molmil
Cryo-EM structure of Her2 extracellular domain-Trastuzumab Fab-Pertuzumab Fab complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pertuzumab FAB HEAVY CHAIN, Pertuzumab FAB LIGHT CHAIN, ...
著者Hao, Y, Yu, X, Bai, Y, Huang, X.
登録日2019-04-02
公開日2019-05-15
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.36 Å)
主引用文献Cryo-EM Structure of HER2-trastuzumab-pertuzumab complex.
Plos One, 14, 2019
5J8R
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BU of 5j8r by Molmil
Crystal Structure of the Catalytic Domain of Human Protein Tyrosine Phosphatase non-receptor Type 12 - K61R mutant
分子名称: Tyrosine-protein phosphatase non-receptor type 12
著者Li, H, Yang, F, Xu, Y.F, Wang, W.J, Xiao, P, Yu, X, Sun, J.P.
登録日2016-04-08
公開日2016-04-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.043 Å)
主引用文献Crystal structure and substrate specificity of PTPN12.
Cell Rep, 15, 2016
6NZU
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BU of 6nzu by Molmil
Structure of the human frataxin-bound iron-sulfur cluster assembly complex
分子名称: Acyl carrier protein, Cysteine desulfurase, mitochondrial, ...
著者Fox, N.G, Yu, X, Xidong, F, Alain, M, Joseph, N, Claire, S.D, Christine, B, Han, S, Yue, W.W.
登録日2019-02-14
公開日2019-05-22
最終更新日2019-07-10
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of the human frataxin-bound iron-sulfur cluster assembly complex provides insight into its activation mechanism.
Nat Commun, 10, 2019
5ZCJ
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BU of 5zcj by Molmil
Crystal structure of complex
分子名称: TP53-binding protein 1, Tudor-interacting repair regulator protein
著者Wang, J, Yuan, Z, Cui, Y, Xie, R, Wang, M, Ma, Y, Yu, X, Liu, X.
登録日2018-02-17
公開日2018-06-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.004 Å)
主引用文献Crystal structure of complex
To Be Published
4RAG
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BU of 4rag by Molmil
CRYSTAL STRUCTURE of PPC2A-D38K
分子名称: MANGANESE (II) ION, Protein phosphatase 1A
著者Pan, C, Tang, J.Y, Xu, Y.F, Xiao, P, Liu, H.D, Wang, H.A, Wang, W.B, Meng, F.G, Yu, X, Sun, J.P.
登録日2014-09-10
公開日2015-08-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The catalytic role of the M2 metal ion in PP2C alpha
Sci Rep, 5, 2015
4R4Z
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BU of 4r4z by Molmil
Structure of PNGF-II in P21 space group
分子名称: PNGF-II
著者Sun, G, Yu, X, Celimuge, Wang, L, Li, M, Gan, J, Qu, D, Ma, J, Chen, L.
登録日2014-08-20
公開日2015-01-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Identification and Characterization of a Novel Prokaryotic Peptide: N-glycosidase from Elizabethkingia meningoseptica
J.Biol.Chem., 2015

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